RNA–Protein interactions for RNA: ENST00000539116.1

LINC02454-201, Transcript of long intergenic non-protein coding RNA 2454, humanhuman

TSL 4 BASIC

Gene LINC02454, Length 589 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02454-201ENST00000539116 PLCG2P16885 1265 aa11.63□□□□□ -0.55
LINC02454-201ENST00000539116 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
LINC02454-201ENST00000539116 SEC24BO95487 1268 aa11.61□□□□□ -0.55
LINC02454-201ENST00000539116 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
LINC02454-201ENST00000539116 POTEFA5A3E0 1075 aa11.57□□□□□ -0.56
LINC02454-201ENST00000539116 DPY19L2Q6NUT2 758 aa11.57□□□□□ -0.56
LINC02454-201ENST00000539116 CADPS2Q86UW7 1296 aa11.56□□□□□ -0.56
LINC02454-201ENST00000539116 MYO15BQ96JP2 1530 aa11.55□□□□□ -0.56
LINC02454-201ENST00000539116 COLQQ9Y215 455 aaPredicted RBP11.55□□□□□ -0.56
LINC02454-201ENST00000539116 G3V3G9 751 aa11.54□□□□□ -0.56
LINC02454-201ENST00000539116 MICALL2Q8IY33 904 aa11.53□□□□□ -0.56
LINC02454-201ENST00000539116 L3MBTL3Q96JM7 780 aaPredicted RBP11.52□□□□□ -0.57
LINC02454-201ENST00000539116 BOLA1Q9Y3E2 137 aa11.52□□□□□ -0.57
LINC02454-201ENST00000539116 SHROOM4Q9ULL8 1493 aa11.5□□□□□ -0.57
LINC02454-201ENST00000539116 TMEM121BQ9BXQ6 578 aaPredicted RBP11.49□□□□□ -0.57
LINC02454-201ENST00000539116 WDR70Q9NW82 654 aa11.48□□□□□ -0.57
LINC02454-201ENST00000539116 PDE4AP27815 886 aa11.46□□□□□ -0.57
LINC02454-201ENST00000539116 SLAIN1Q8ND83 568 aa11.46□□□□□ -0.57
LINC02454-201ENST00000539116 CRISPLD2Q9H0B8 497 aa11.46□□□□□ -0.57
LINC02454-201ENST00000539116 NCKAP5LQ9HCH0 1330 aa11.45□□□□□ -0.58
LINC02454-201ENST00000539116 ST18O60284 1047 aa11.45□□□□□ -0.58
LINC02454-201ENST00000539116 MMRN1Q13201 1228 aa11.43□□□□□ -0.58
LINC02454-201ENST00000539116 LARP6Q9BRS8 491 aaKnown RBP11.41□□□□□ -0.58
LINC02454-201ENST00000539116 SNPHO15079 494 aa11.4□□□□□ -0.58
LINC02454-201ENST00000539116 MFSD10Q14728 455 aa11.4□□□□□ -0.58
LINC02454-201ENST00000539116 P3H3Q8IVL6 736 aa11.4□□□□□ -0.58
LINC02454-201ENST00000539116 SPNS2Q8IVW8 549 aa11.4□□□□□ -0.58
LINC02454-201ENST00000539116 DDX27Q96GQ7 796 aaKnown RBP11.4□□□□□ -0.58
LINC02454-201ENST00000539116 NACADO15069 1562 aa11.4□□□□□ -0.58
LINC02454-201ENST00000539116 C3orf67Q6ZVT6 689 aa11.39□□□□□ -0.59
LINC02454-201ENST00000539116 TMC2Q8TDI7 906 aa11.39□□□□□ -0.59
LINC02454-201ENST00000539116 GPHNQ9NQX3 736 aaPredicted RBP11.39□□□□□ -0.59
LINC02454-201ENST00000539116 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
LINC02454-201ENST00000539116 BCANQ96GW7 911 aa11.34□□□□□ -0.59
LINC02454-201ENST00000539116 C2orf72A6NCS6 295 aa11.33□□□□□ -0.6
LINC02454-201ENST00000539116 KIF3CO14782 793 aa11.33□□□□□ -0.6
LINC02454-201ENST00000539116 E2F4Q16254 413 aa11.33□□□□□ -0.6
LINC02454-201ENST00000539116 ABCC9O60706 1549 aa11.33□□□□□ -0.6
LINC02454-201ENST00000539116 FOXK1P85037 733 aa11.32□□□□□ -0.6
LINC02454-201ENST00000539116 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
LINC02454-201ENST00000539116 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.32□□□□□ -0.6
LINC02454-201ENST00000539116 TMEM92Q6UXU6 159 aa11.31□□□□□ -0.6
LINC02454-201ENST00000539116 DSG2Q14126 1118 aa11.3□□□□□ -0.6
LINC02454-201ENST00000539116 NBR1Q14596 966 aa11.29□□□□□ -0.6
LINC02454-201ENST00000539116 CAMK2BQ13554 666 aa11.27□□□□□ -0.61
LINC02454-201ENST00000539116 PLPP6Q8IY26 295 aa11.26□□□□□ -0.61
LINC02454-201ENST00000539116 RB1CC1Q8TDY2 1594 aa11.25□□□□□ -0.61
LINC02454-201ENST00000539116 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
LINC02454-201ENST00000539116 SCRIBQ14160 1630 aa11.24□□□□□ -0.61
LINC02454-201ENST00000539116 ARIH1Q9Y4X5 557 aaPredicted RBP11.22□□□□□ -0.61
LINC02454-201ENST00000539116 EMILIN3Q9NT22 766 aa11.18□□□□□ -0.62
LINC02454-201ENST00000539116 SUPT5HO00267 1087 aaKnown RBP11.17□□□□□ -0.62
LINC02454-201ENST00000539116 MARVELD3Q96A59 401 aa11.14□□□□□ -0.63
LINC02454-201ENST00000539116 DPYSL4O14531 572 aa11.13□□□□□ -0.63
LINC02454-201ENST00000539116 EMP3P54852 163 aa11.12□□□□□ -0.63
LINC02454-201ENST00000539116 OXER1Q8TDS5 423 aa11.12□□□□□ -0.63
LINC02454-201ENST00000539116 SLC34A2O95436 690 aa11.11□□□□□ -0.63
LINC02454-201ENST00000539116 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC02454-201ENST00000539116 MAP3K9P80192 1104 aa11.1□□□□□ -0.63
LINC02454-201ENST00000539116 SPDYE16A6NNV3 312 aaPredicted RBP11.09□□□□□ -0.63
LINC02454-201ENST00000539116 PDIA6Q15084 440 aa11.09□□□□□ -0.63
LINC02454-201ENST00000539116 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
LINC02454-201ENST00000539116 SEMA3EO15041 775 aa11.07□□□□□ -0.64
LINC02454-201ENST00000539116 TBC1D12O60347 775 aa11.07□□□□□ -0.64
LINC02454-201ENST00000539116 DOK7Q18PE1 504 aa11.07□□□□□ -0.64
LINC02454-201ENST00000539116 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
LINC02454-201ENST00000539116 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
LINC02454-201ENST00000539116 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
LINC02454-201ENST00000539116 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
LINC02454-201ENST00000539116 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
LINC02454-201ENST00000539116 HS3ST6Q96QI5 342 aa11.02□□□□□ -0.65
LINC02454-201ENST00000539116 PCDHGA4Q9Y5G9 962 aa11.02□□□□□ -0.65
LINC02454-201ENST00000539116 EVI5O60447 810 aa11.01□□□□□ -0.65
LINC02454-201ENST00000539116 SMYD5Q6GMV2 418 aa11.01□□□□□ -0.65
LINC02454-201ENST00000539116 KRTAP3-3Q9BYR6 98 aa11.01□□□□□ -0.65
LINC02454-201ENST00000539116 KRTAP3-2Q9BYR7 98 aa11.01□□□□□ -0.65
LINC02454-201ENST00000539116 ZSWIM6Q9HCJ5 1215 aa11□□□□□ -0.65
LINC02454-201ENST00000539116 UNC13AQ9UPW8 1703 aa10.99□□□□□ -0.65
LINC02454-201ENST00000539116 ZNF710Q8N1W2 664 aa10.99□□□□□ -0.65
LINC02454-201ENST00000539116 FAM205CA6NFA0 338 aa10.98□□□□□ -0.65
LINC02454-201ENST00000539116 MLLT3P42568 568 aaPredicted RBP10.97□□□□□ -0.65
LINC02454-201ENST00000539116 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
LINC02454-201ENST00000539116 PTGER2P43116 358 aa10.96□□□□□ -0.65
LINC02454-201ENST00000539116 LMOD2Q6P5Q4 547 aa10.96□□□□□ -0.65
LINC02454-201ENST00000539116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC02454-201ENST00000539116 ANO8Q9HCE9 1232 aaPredicted RBP10.94□□□□□ -0.66
LINC02454-201ENST00000539116 ARSIQ5FYB1 569 aa10.93□□□□□ -0.66
LINC02454-201ENST00000539116 GPR153Q6NV75 609 aa10.93□□□□□ -0.66
LINC02454-201ENST00000539116 BAZ1AQ9NRL2 1556 aaPredicted RBP10.92□□□□□ -0.66
LINC02454-201ENST00000539116 GRXCR2A6NFK2 248 aa10.92□□□□□ -0.66
LINC02454-201ENST00000539116 KDM4FA0A1W2PPD8 638 aa10.91□□□□□ -0.66
LINC02454-201ENST00000539116 NUDT7P0C024 238 aa10.91□□□□□ -0.66
LINC02454-201ENST00000539116 DDX12PQ92771 950 aa10.91□□□□□ -0.66
LINC02454-201ENST00000539116 POTEB3A0JP26 581 aa10.89□□□□□ -0.67
LINC02454-201ENST00000539116 TPRNQ4KMQ1 711 aa10.89□□□□□ -0.67
LINC02454-201ENST00000539116 POTEBQ6S5H4 581 aa10.89□□□□□ -0.67
LINC02454-201ENST00000539116 KHSRPQ92945 711 aaKnown RBP eCLIP10.89□□□□□ -0.67
LINC02454-201ENST00000539116 HOXB1P14653 301 aaPredicted RBP10.88□□□□□ -0.67
LINC02454-201ENST00000539116 PHF14O94880 888 aa10.87□□□□□ -0.67
LINC02454-201ENST00000539116 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms