RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CAMSAP2Q08AD1 1489 aa20.6■□□□□ 0.89
ACTN1-205ENST00000538545 FOXD1Q16676 465 aa20.59■□□□□ 0.89
ACTN1-205ENST00000538545 CDC42BPAQ5VT25 1732 aa20.57■□□□□ 0.88
ACTN1-205ENST00000538545 ADCY10Q96PN6 1610 aa20.56■□□□□ 0.88
ACTN1-205ENST00000538545 ABCC10Q5T3U5 1492 aa20.56■□□□□ 0.88
ACTN1-205ENST00000538545 HNRNPMP52272 730 aaKnown RBP eCLIP20.56■□□□□ 0.881e-6■■■■□ 24.2
ACTN1-205ENST00000538545 DNMT1P26358 1616 aaKnown RBP20.55■□□□□ 0.88
ACTN1-205ENST00000538545 ITSN2Q9NZM3 1697 aa20.52■□□□□ 0.88
ACTN1-205ENST00000538545 ABCC2Q92887 1545 aa20.52■□□□□ 0.88
ACTN1-205ENST00000538545 GCC2Q8IWJ2 1684 aa20.5■□□□□ 0.87
ACTN1-205ENST00000538545 DENND4BO75064 1496 aaPredicted RBP20.49■□□□□ 0.87
ACTN1-205ENST00000538545 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
ACTN1-205ENST00000538545 TTC37Q6PGP7 1564 aa20.47■□□□□ 0.87
ACTN1-205ENST00000538545 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
ACTN1-205ENST00000538545 AKNAQ7Z591 1439 aa20.47■□□□□ 0.87
ACTN1-205ENST00000538545 MPHOSPH9Q99550 1183 aa20.46■□□□□ 0.87
ACTN1-205ENST00000538545 CDC42BPBQ9Y5S2 1711 aa20.45■□□□□ 0.86
ACTN1-205ENST00000538545 ZCCHC11Q5TAX3 1644 aaKnown RBP20.44■□□□□ 0.86
ACTN1-205ENST00000538545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.44■□□□□ 0.86
ACTN1-205ENST00000538545 NCOA1Q15788 1441 aa20.43■□□□□ 0.86
ACTN1-205ENST00000538545 ROCK1Q13464 1354 aa20.42■□□□□ 0.86
ACTN1-205ENST00000538545 SAMD9LQ8IVG5 1584 aa20.39■□□□□ 0.86
ACTN1-205ENST00000538545 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
ACTN1-205ENST00000538545 ARHGAP5Q13017 1502 aa20.39■□□□□ 0.85
ACTN1-205ENST00000538545 TONSLQ96HA7 1378 aa20.39■□□□□ 0.85
ACTN1-205ENST00000538545 TSPY4P0CV99 314 aa20.38■□□□□ 0.85
ACTN1-205ENST00000538545 TSPY10P0CW01 314 aa20.38■□□□□ 0.85
ACTN1-205ENST00000538545 PPP1R15AO75807 674 aaPredicted RBP20.37■□□□□ 0.85
ACTN1-205ENST00000538545 MIER1Q8N108 512 aa20.37■□□□□ 0.85
ACTN1-205ENST00000538545 C9orf84Q5VXU9 1444 aa20.37■□□□□ 0.85
ACTN1-205ENST00000538545 CROCC2H7BZ55 1655 aa20.37■□□□□ 0.85
ACTN1-205ENST00000538545 KDM5BQ9UGL1 1544 aa20.37■□□□□ 0.85
ACTN1-205ENST00000538545 PREX2Q70Z35 1606 aa20.36■□□□□ 0.85
ACTN1-205ENST00000538545 MBD5Q9P267 1494 aa20.36■□□□□ 0.85
ACTN1-205ENST00000538545 ANKRD30AQ9BXX3 1397 aa20.35■□□□□ 0.85
ACTN1-205ENST00000538545 SYCP2Q9BX26 1530 aa20.35■□□□□ 0.85
ACTN1-205ENST00000538545 ADGBQ8N7X0 1667 aa20.33■□□□□ 0.84
ACTN1-205ENST00000538545 UHRF1BP1LA0JNW5 1464 aa20.33■□□□□ 0.84
ACTN1-205ENST00000538545 ANKRD50Q9ULJ7 1429 aa20.32■□□□□ 0.84
ACTN1-205ENST00000538545 ADGRL2O95490 1459 aa20.3■□□□□ 0.84
ACTN1-205ENST00000538545 KIF15Q9NS87 1388 aa20.29■□□□□ 0.84
ACTN1-205ENST00000538545 MYO5CQ9NQX4 1742 aa20.29■□□□□ 0.84
ACTN1-205ENST00000538545 ARHGEF12Q9NZN5 1544 aa20.29■□□□□ 0.84
ACTN1-205ENST00000538545 PZPP20742 1482 aa20.28■□□□□ 0.84
ACTN1-205ENST00000538545 CCDC141Q6ZP82 1450 aa20.27■□□□□ 0.84
ACTN1-205ENST00000538545 PKD2Q13563 968 aa20.26■□□□□ 0.83
ACTN1-205ENST00000538545 L3MBTL2Q969R5 705 aa20.26■□□□□ 0.83
ACTN1-205ENST00000538545 NUP155O75694 1391 aa20.25■□□□□ 0.83
ACTN1-205ENST00000538545 ANKRD30BQ9BXX2 1392 aa20.24■□□□□ 0.83
ACTN1-205ENST00000538545 AFAP1Q8N556 730 aa20.24■□□□□ 0.83
ACTN1-205ENST00000538545 YTHDC1Q96MU7 727 aaKnown RBP20.24■□□□□ 0.83
ACTN1-205ENST00000538545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.835e-7■□□□□ 10.3
ACTN1-205ENST00000538545 PLCH2O75038 1416 aa20.24■□□□□ 0.83
ACTN1-205ENST00000538545 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
ACTN1-205ENST00000538545 EFCAB2Q5VUJ9 269 aa20.23■□□□□ 0.83
ACTN1-205ENST00000538545 ARHGEF5Q12774 1597 aa20.22■□□□□ 0.83
ACTN1-205ENST00000538545 SHANK2Q9UPX8 1470 aa20.22■□□□□ 0.83
ACTN1-205ENST00000538545 WDR7Q9Y4E6 1490 aa20.22■□□□□ 0.83
ACTN1-205ENST00000538545 ASXL2Q76L83 1435 aa20.22■□□□□ 0.83
ACTN1-205ENST00000538545 TRAPPC8Q9Y2L5 1435 aa20.21■□□□□ 0.83
ACTN1-205ENST00000538545 DDX10Q13206 875 aaKnown RBP20.18■□□□□ 0.82
ACTN1-205ENST00000538545 CYB5RLQ6IPT4 315 aa20.18■□□□□ 0.82
ACTN1-205ENST00000538545 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
ACTN1-205ENST00000538545 NBPF8Q3BBV2 869 aa20.15■□□□□ 0.82
ACTN1-205ENST00000538545 RSPH4AQ5TD94 716 aa20.15■□□□□ 0.82
ACTN1-205ENST00000538545 MYT1LQ9UL68 1186 aa20.15■□□□□ 0.82
ACTN1-205ENST00000538545 PLEKHH2Q8IVE3 1493 aa20.14■□□□□ 0.82
ACTN1-205ENST00000538545 ZNF326Q5BKZ1 582 aaKnown RBP20.14■□□□□ 0.81
ACTN1-205ENST00000538545 RPRD2Q5VT52 1461 aaKnown RBP20.13■□□□□ 0.81
ACTN1-205ENST00000538545 KIAA1107Q9UPP5 1409 aa20.13■□□□□ 0.81
ACTN1-205ENST00000538545 ABCC1P33527 1531 aa20.12■□□□□ 0.81
ACTN1-205ENST00000538545 FANCAO15360 1455 aa20.11■□□□□ 0.81
ACTN1-205ENST00000538545 SPAG9O60271 1321 aaKnown RBP20.09■□□□□ 0.81
ACTN1-205ENST00000538545 TEX14Q8IWB6 1497 aa20.08■□□□□ 0.8
ACTN1-205ENST00000538545 ABCA9Q8IUA7 1624 aa20.05■□□□□ 0.8
ACTN1-205ENST00000538545 SCAPERQ9BY12 1400 aa20.05■□□□□ 0.8
ACTN1-205ENST00000538545 HSPA5P11021 654 aaKnown RBP20.05■□□□□ 0.8
ACTN1-205ENST00000538545 KDM2AQ9Y2K7 1162 aa20.05■□□□□ 0.8
ACTN1-205ENST00000538545 FAM135AQ9P2D6 1515 aa20.04■□□□□ 0.8
ACTN1-205ENST00000538545 MAST1Q9Y2H9 1570 aa20.04■□□□□ 0.8
ACTN1-205ENST00000538545 ADGRL1O94910 1474 aa20.03■□□□□ 0.8
ACTN1-205ENST00000538545 RGL3Q3MIN7 710 aa20.01■□□□□ 0.79
ACTN1-205ENST00000538545 ACIN1Q9UKV3 1341 aaKnown RBP20■□□□□ 0.79
ACTN1-205ENST00000538545 PLXNC1O60486 1568 aa20■□□□□ 0.79
ACTN1-205ENST00000538545 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
ACTN1-205ENST00000538545 KDM5DQ9BY66 1539 aa19.98■□□□□ 0.79
ACTN1-205ENST00000538545 ZFYVE16Q7Z3T8 1539 aa19.98■□□□□ 0.79
ACTN1-205ENST00000538545 DUOX2Q9NRD8 1548 aa19.98■□□□□ 0.79
ACTN1-205ENST00000538545 C11orf95C9JLR9 678 aaPredicted RBP19.97■□□□□ 0.79
ACTN1-205ENST00000538545 EIF4G2P78344 907 aaKnown RBP eCLIP19.96■□□□□ 0.796e-7■■■■■ 48.9
ACTN1-205ENST00000538545 DCAF11Q8TEB1 546 aa19.96■□□□□ 0.79
ACTN1-205ENST00000538545 KIF3BO15066 747 aa19.95■□□□□ 0.78
ACTN1-205ENST00000538545 ARAP3Q8WWN8 1544 aa19.95■□□□□ 0.78
ACTN1-205ENST00000538545 RAPGEF3O95398 923 aa19.95■□□□□ 0.78
ACTN1-205ENST00000538545 RIMBP3CA6NJZ7 1639 aa19.95■□□□□ 0.78
ACTN1-205ENST00000538545 RIMBP3BA6NNM3 1639 aa19.95■□□□□ 0.78
ACTN1-205ENST00000538545 RIMBP3Q9UFD9 1639 aa19.95■□□□□ 0.78
ACTN1-205ENST00000538545 PLA2R1Q13018 1463 aa19.94■□□□□ 0.78
ACTN1-205ENST00000538545 UNC13BO14795 1591 aa19.93■□□□□ 0.78
ACTN1-205ENST00000538545 WASHC2AQ641Q2 1341 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms