RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 NCOA2Q15596 1464 aa15.33■□□□□ 0.04
LDHA-216ENST00000538451 KIF14Q15058 1648 aa15.33■□□□□ 0.04
LDHA-216ENST00000538451 CCNB3Q8WWL7 1395 aa15.32■□□□□ 0.04
LDHA-216ENST00000538451 KCNH8Q96L42 1107 aa15.32■□□□□ 0.04
LDHA-216ENST00000538451 TEX14Q8IWB6 1497 aa15.31■□□□□ 0.04
LDHA-216ENST00000538451 KDM6BO15054 1643 aa15.31■□□□□ 0.04
LDHA-216ENST00000538451 MAP3K4Q9Y6R4 1608 aa15.31■□□□□ 0.04
LDHA-216ENST00000538451 MAGI3Q5TCQ9 1506 aa15.3■□□□□ 0.04
LDHA-216ENST00000538451 MYOM3Q5VTT5 1437 aa15.29■□□□□ 0.04
LDHA-216ENST00000538451 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
LDHA-216ENST00000538451 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
LDHA-216ENST00000538451 CD109Q6YHK3 1445 aa15.27■□□□□ 0.04
LDHA-216ENST00000538451 MIA2Q96PC5 1412 aa15.27■□□□□ 0.04
LDHA-216ENST00000538451 PPRC1Q5VV67 1664 aaKnown RBP15.27■□□□□ 0.04
LDHA-216ENST00000538451 RRBP1Q9P2E9 1410 aaKnown RBP15.27■□□□□ 0.03
LDHA-216ENST00000538451 CFDP1Q9UEE9 299 aaPredicted RBP15.25■□□□□ 0.03
LDHA-216ENST00000538451 ITSN2Q9NZM3 1697 aa15.25■□□□□ 0.03
LDHA-216ENST00000538451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.25■□□□□ 0.03
LDHA-216ENST00000538451 FAM50AQ14320 339 aaKnown RBP15.24■□□□□ 0.03
LDHA-216ENST00000538451 FGD6Q6ZV73 1430 aa15.24■□□□□ 0.03
LDHA-216ENST00000538451 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
LDHA-216ENST00000538451 ABCA9Q8IUA7 1624 aa15.19■□□□□ 0.02
LDHA-216ENST00000538451 GPATCH8Q9UKJ3 1502 aaKnown RBP15.19■□□□□ 0.02
LDHA-216ENST00000538451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.18■□□□□ 0.029e-20■□□□□ 9.6
LDHA-216ENST00000538451 EFCAB2Q5VUJ9 269 aa15.17■□□□□ 0.02
LDHA-216ENST00000538451 PTPN23Q9H3S7 1636 aa15.17■□□□□ 0.02
LDHA-216ENST00000538451 RSPH4AQ5TD94 716 aa15.17■□□□□ 0.02
LDHA-216ENST00000538451 ZNF777Q9ULD5 760 aaPredicted RBP15.17■□□□□ 0.02
LDHA-216ENST00000538451 COL17A1Q9UMD9 1497 aaPredicted RBP15.16■□□□□ 0.02
LDHA-216ENST00000538451 MYO5CQ9NQX4 1742 aa15.16■□□□□ 0.02
LDHA-216ENST00000538451 TCOF1Q13428 1488 aaKnown RBP15.16■□□□□ 0.02
LDHA-216ENST00000538451 PLCH2O75038 1416 aa15.15■□□□□ 0.02
LDHA-216ENST00000538451 ARHGAP5Q13017 1502 aa15.15■□□□□ 0.02
LDHA-216ENST00000538451 PLEKHH2Q8IVE3 1493 aa15.15■□□□□ 0.02
LDHA-216ENST00000538451 ARAP3Q8WWN8 1544 aa15.14■□□□□ 0.01
LDHA-216ENST00000538451 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
LDHA-216ENST00000538451 CDC42BPAQ5VT25 1732 aa15.14■□□□□ 0.01
LDHA-216ENST00000538451 TTC37Q6PGP7 1564 aa15.13■□□□□ 0.01
LDHA-216ENST00000538451 ITGAEP38570 1179 aa15.13■□□□□ 0.01
LDHA-216ENST00000538451 NEO1Q92859 1461 aa15.11■□□□□ 0.01
LDHA-216ENST00000538451 CAMSAP2Q08AD1 1489 aa15.11■□□□□ 0.01
LDHA-216ENST00000538451 TSPY4P0CV99 314 aa15.1■□□□□ 0.01
LDHA-216ENST00000538451 TSPY10P0CW01 314 aa15.1■□□□□ 0.01
LDHA-216ENST00000538451 ACIN1Q9UKV3 1341 aaKnown RBP15.08■□□□□ 0.01
LDHA-216ENST00000538451 CFAP74Q9C0B2 1584 aa15.08■□□□□ 0
LDHA-216ENST00000538451 CDC42BPBQ9Y5S2 1711 aa15.08■□□□□ 0
LDHA-216ENST00000538451 KIAA1107Q9UPP5 1409 aa15.08■□□□□ 0
LDHA-216ENST00000538451 FANCAO15360 1455 aa15.06■□□□□ 0
LDHA-216ENST00000538451 ZNF644Q9H582 1327 aaPredicted RBP15.06■□□□□ 0
LDHA-216ENST00000538451 DAPK1P53355 1430 aa15.04■□□□□ -0
LDHA-216ENST00000538451 DNMT1P26358 1616 aaKnown RBP15.04■□□□□ -0
LDHA-216ENST00000538451 AKNAQ7Z591 1439 aa15.03■□□□□ -0
LDHA-216ENST00000538451 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
LDHA-216ENST00000538451 ARHGEF5Q12774 1597 aa15.03■□□□□ -0
LDHA-216ENST00000538451 CCDC141Q6ZP82 1450 aa15.02■□□□□ -0
LDHA-216ENST00000538451 RAPGEF3O95398 923 aa15.02■□□□□ -0
LDHA-216ENST00000538451 HNRNPMP52272 730 aaKnown RBP eCLIP15.02■□□□□ -0
LDHA-216ENST00000538451 SAMD9LQ8IVG5 1584 aa15.02□□□□□ -0.01
LDHA-216ENST00000538451 KDM4FA0A1W2PPD8 638 aa15.01□□□□□ -0.01
LDHA-216ENST00000538451 ROCK1Q13464 1354 aa15.01□□□□□ -0.01
LDHA-216ENST00000538451 ANKRD30AQ9BXX3 1397 aa15.01□□□□□ -0.01
LDHA-216ENST00000538451 ABCC5O15440 1437 aa15.01□□□□□ -0.01
LDHA-216ENST00000538451 DENND4BO75064 1496 aaPredicted RBP15.01□□□□□ -0.01
LDHA-216ENST00000538451 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
LDHA-216ENST00000538451 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
LDHA-216ENST00000538451 HRCP23327 699 aa14.99□□□□□ -0.01
LDHA-216ENST00000538451 ABCC1P33527 1531 aa14.99□□□□□ -0.01
LDHA-216ENST00000538451 SYCP2Q9BX26 1530 aa14.99□□□□□ -0.01
LDHA-216ENST00000538451 CHIC2Q9UKJ5 165 aa14.98□□□□□ -0.01
LDHA-216ENST00000538451 SCAPERQ9BY12 1400 aa14.98□□□□□ -0.01
LDHA-216ENST00000538451 SETD5Q9C0A6 1442 aa14.98□□□□□ -0.01
LDHA-216ENST00000538451 MBD5Q9P267 1494 aa14.98□□□□□ -0.01
LDHA-216ENST00000538451 MYT1LQ9UL68 1186 aa14.97□□□□□ -0.01
LDHA-216ENST00000538451 HFM1A2PYH4 1435 aa14.97□□□□□ -0.01
LDHA-216ENST00000538451 C9orf84Q5VXU9 1444 aa14.96□□□□□ -0.01
LDHA-216ENST00000538451 FRMPD1Q5SYB0 1578 aa14.96□□□□□ -0.02
LDHA-216ENST00000538451 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
LDHA-216ENST00000538451 CROCC2H7BZ55 1655 aa14.95□□□□□ -0.02
LDHA-216ENST00000538451 ZNF518AQ6AHZ1 1483 aa14.95□□□□□ -0.02
LDHA-216ENST00000538451 SPAG9O60271 1321 aaKnown RBP14.94□□□□□ -0.02
LDHA-216ENST00000538451 ADGRL2O95490 1459 aa14.94□□□□□ -0.02
LDHA-216ENST00000538451 RTEL1-TNFRSF6BF6WH68 1400 aa14.94□□□□□ -0.02
LDHA-216ENST00000538451 ADGBQ8N7X0 1667 aa14.94□□□□□ -0.02
LDHA-216ENST00000538451 RRP7BPQ9NSQ0 103 aa14.93□□□□□ -0.02
LDHA-216ENST00000538451 PTPRKQ15262 1439 aa14.93□□□□□ -0.02
LDHA-216ENST00000538451 RICTORQ6R327 1708 aa14.93□□□□□ -0.02
LDHA-216ENST00000538451 MAST1Q9Y2H9 1570 aa14.93□□□□□ -0.02
LDHA-216ENST00000538451 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
LDHA-216ENST00000538451 POGZQ7Z3K3 1410 aa14.92□□□□□ -0.02
LDHA-216ENST00000538451 MAGI2Q86UL8 1455 aa14.91□□□□□ -0.02
LDHA-216ENST00000538451 RAB3GAP2Q9H2M9 1393 aa14.91□□□□□ -0.02
LDHA-216ENST00000538451 ZMYM4Q5VZL5 1548 aa14.91□□□□□ -0.02
LDHA-216ENST00000538451 NAIPQ13075 1403 aa14.9□□□□□ -0.02
LDHA-216ENST00000538451 ARHGEF12Q9NZN5 1544 aa14.9□□□□□ -0.02
LDHA-216ENST00000538451 DCAF8L1A6NGE4 600 aa14.9□□□□□ -0.02
LDHA-216ENST00000538451 HOXD11P31277 338 aaPredicted RBP14.9□□□□□ -0.02
LDHA-216ENST00000538451 AFAP1Q8N556 730 aa14.9□□□□□ -0.02
LDHA-216ENST00000538451 TRAPPC8Q9Y2L5 1435 aa14.89□□□□□ -0.03
LDHA-216ENST00000538451 KIF15Q9NS87 1388 aa14.89□□□□□ -0.03
LDHA-216ENST00000538451 ARHGEF40Q8TER5 1519 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms