RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MAP3K4Q9Y6R4 1608 aa16.15■□□□□ 0.18
TNFRSF1A-211ENST00000538363 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
TNFRSF1A-211ENST00000538363 MYO5CQ9NQX4 1742 aa16.14■□□□□ 0.17
TNFRSF1A-211ENST00000538363 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
TNFRSF1A-211ENST00000538363 ZNF777Q9ULD5 760 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1A-211ENST00000538363 ABCA9Q8IUA7 1624 aa16.14■□□□□ 0.17
TNFRSF1A-211ENST00000538363 ITGAEP38570 1179 aa16.13■□□□□ 0.17
TNFRSF1A-211ENST00000538363 PPRC1Q5VV67 1664 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-211ENST00000538363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.13■□□□□ 0.17
TNFRSF1A-211ENST00000538363 CFDP1Q9UEE9 299 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-211ENST00000538363 GLI2P10070 1586 aa16.12■□□□□ 0.17
TNFRSF1A-211ENST00000538363 CDC42BPAQ5VT25 1732 aa16.11■□□□□ 0.17
TNFRSF1A-211ENST00000538363 PHLDB1Q86UU1 1377 aa16.11■□□□□ 0.17
TNFRSF1A-211ENST00000538363 MYOM3Q5VTT5 1437 aa16.1■□□□□ 0.17
TNFRSF1A-211ENST00000538363 PREX2Q70Z35 1606 aa16.09■□□□□ 0.17
TNFRSF1A-211ENST00000538363 ITSN2Q9NZM3 1697 aa16.08■□□□□ 0.17
TNFRSF1A-211ENST00000538363 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-211ENST00000538363 CDC42BPBQ9Y5S2 1711 aa16.07■□□□□ 0.16
TNFRSF1A-211ENST00000538363 FAM69CQ0P6D2 419 aa16.06■□□□□ 0.16
TNFRSF1A-211ENST00000538363 FGD6Q6ZV73 1430 aa16.04■□□□□ 0.16
TNFRSF1A-211ENST00000538363 EFCAB2Q5VUJ9 269 aa16.03■□□□□ 0.16
TNFRSF1A-211ENST00000538363 MIA2Q96PC5 1412 aa16.02■□□□□ 0.16
TNFRSF1A-211ENST00000538363 ARHGAP5Q13017 1502 aa16.02■□□□□ 0.15
TNFRSF1A-211ENST00000538363 RRBP1Q9P2E9 1410 aaKnown RBP16.02■□□□□ 0.15
TNFRSF1A-211ENST00000538363 GPATCH8Q9UKJ3 1502 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1A-211ENST00000538363 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
TNFRSF1A-211ENST00000538363 CD109Q6YHK3 1445 aa16■□□□□ 0.15
TNFRSF1A-211ENST00000538363 CFAP74Q9C0B2 1584 aa16■□□□□ 0.15
TNFRSF1A-211ENST00000538363 MYT1LQ9UL68 1186 aa15.98■□□□□ 0.15
TNFRSF1A-211ENST00000538363 SAMD9LQ8IVG5 1584 aa15.97■□□□□ 0.15
TNFRSF1A-211ENST00000538363 KCNA4P22459 653 aa15.97■□□□□ 0.15
TNFRSF1A-211ENST00000538363 ZNF644Q9H582 1327 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-211ENST00000538363 PLCH2O75038 1416 aa15.96■□□□□ 0.15
TNFRSF1A-211ENST00000538363 TSPY4P0CV99 314 aa15.96■□□□□ 0.15
TNFRSF1A-211ENST00000538363 TSPY10P0CW01 314 aa15.96■□□□□ 0.15
TNFRSF1A-211ENST00000538363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.95■□□□□ 0.14
TNFRSF1A-211ENST00000538363 FANCAO15360 1455 aa15.95■□□□□ 0.14
TNFRSF1A-211ENST00000538363 ARAP3Q8WWN8 1544 aa15.94■□□□□ 0.14
TNFRSF1A-211ENST00000538363 HNRNPMP52272 730 aaKnown RBP eCLIP15.94■□□□□ 0.14
TNFRSF1A-211ENST00000538363 CHIC2Q9UKJ5 165 aa15.94■□□□□ 0.14
TNFRSF1A-211ENST00000538363 TEX14Q8IWB6 1497 aa15.94■□□□□ 0.14
TNFRSF1A-211ENST00000538363 CAMSAP2Q08AD1 1489 aa15.93■□□□□ 0.14
TNFRSF1A-211ENST00000538363 RSPH4AQ5TD94 716 aa15.93■□□□□ 0.14
TNFRSF1A-211ENST00000538363 ABCC1P33527 1531 aa15.93■□□□□ 0.14
TNFRSF1A-211ENST00000538363 PLEKHH2Q8IVE3 1493 aa15.92■□□□□ 0.14
TNFRSF1A-211ENST00000538363 KDM6BO15054 1643 aa15.92■□□□□ 0.14
TNFRSF1A-211ENST00000538363 SYCP2Q9BX26 1530 aa15.92■□□□□ 0.14
TNFRSF1A-211ENST00000538363 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1A-211ENST00000538363 RICTORQ6R327 1708 aa15.89■□□□□ 0.13
TNFRSF1A-211ENST00000538363 FRMPD1Q5SYB0 1578 aa15.89■□□□□ 0.13
TNFRSF1A-211ENST00000538363 ADGRL1O94910 1474 aa15.89■□□□□ 0.13
TNFRSF1A-211ENST00000538363 NEO1Q92859 1461 aa15.89■□□□□ 0.13
TNFRSF1A-211ENST00000538363 CROCC2H7BZ55 1655 aa15.87■□□□□ 0.13
TNFRSF1A-211ENST00000538363 RRP7BPQ9NSQ0 103 aa15.86■□□□□ 0.13
TNFRSF1A-211ENST00000538363 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-211ENST00000538363 DAPK1P53355 1430 aa15.85■□□□□ 0.13
TNFRSF1A-211ENST00000538363 AKNAQ7Z591 1439 aa15.85■□□□□ 0.13
TNFRSF1A-211ENST00000538363 ARHGEF12Q9NZN5 1544 aa15.85■□□□□ 0.13
TNFRSF1A-211ENST00000538363 NPM3O75607 178 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-211ENST00000538363 HOXD11P31277 338 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-211ENST00000538363 SCAPERQ9BY12 1400 aa15.84■□□□□ 0.13
TNFRSF1A-211ENST00000538363 KIAA1107Q9UPP5 1409 aa15.83■□□□□ 0.12
TNFRSF1A-211ENST00000538363 COL17A1Q9UMD9 1497 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1A-211ENST00000538363 DNMT1P26358 1616 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-211ENST00000538363 SPAG9O60271 1321 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1A-211ENST00000538363 ANKRD30AQ9BXX3 1397 aa15.82■□□□□ 0.12
TNFRSF1A-211ENST00000538363 ABCC5O15440 1437 aa15.82■□□□□ 0.12
TNFRSF1A-211ENST00000538363 CCDC141Q6ZP82 1450 aa15.82■□□□□ 0.12
TNFRSF1A-211ENST00000538363 POGZQ7Z3K3 1410 aa15.81■□□□□ 0.12
TNFRSF1A-211ENST00000538363 AFAP1Q8N556 730 aa15.8■□□□□ 0.12
TNFRSF1A-211ENST00000538363 ARHGEF5Q12774 1597 aa15.79■□□□□ 0.12
TNFRSF1A-211ENST00000538363 HECW2Q9P2P5 1572 aa15.79■□□□□ 0.12
TNFRSF1A-211ENST00000538363 DENND4BO75064 1496 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-211ENST00000538363 SETD5Q9C0A6 1442 aa15.79■□□□□ 0.12
TNFRSF1A-211ENST00000538363 TRAPPC8Q9Y2L5 1435 aa15.79■□□□□ 0.12
TNFRSF1A-211ENST00000538363 KDM5CP41229 1560 aa15.79■□□□□ 0.12
TNFRSF1A-211ENST00000538363 C9orf84Q5VXU9 1444 aa15.78■□□□□ 0.12
TNFRSF1A-211ENST00000538363 TRIM52Q96A61 297 aa15.78■□□□□ 0.12
TNFRSF1A-211ENST00000538363 INO80Q9ULG1 1556 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-211ENST00000538363 ADGBQ8N7X0 1667 aa15.77■□□□□ 0.12
TNFRSF1A-211ENST00000538363 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.12
TNFRSF1A-211ENST00000538363 ZMYM4Q5VZL5 1548 aa15.77■□□□□ 0.11
TNFRSF1A-211ENST00000538363 ABCA6Q8N139 1617 aa15.76■□□□□ 0.11
TNFRSF1A-211ENST00000538363 ZFYVE16Q7Z3T8 1539 aa15.76■□□□□ 0.11
TNFRSF1A-211ENST00000538363 ZNF518AQ6AHZ1 1483 aa15.76■□□□□ 0.11
TNFRSF1A-211ENST00000538363 MBD5Q9P267 1494 aa15.76■□□□□ 0.11
TNFRSF1A-211ENST00000538363 PTPRKQ15262 1439 aa15.76■□□□□ 0.11
TNFRSF1A-211ENST00000538363 KIDINS220Q9ULH0 1771 aa15.75■□□□□ 0.11
TNFRSF1A-211ENST00000538363 ARHGEF40Q8TER5 1519 aa15.75■□□□□ 0.11
TNFRSF1A-211ENST00000538363 ROCK1Q13464 1354 aa15.75■□□□□ 0.11
TNFRSF1A-211ENST00000538363 RAPGEF3O95398 923 aa15.74■□□□□ 0.11
TNFRSF1A-211ENST00000538363 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
TNFRSF1A-211ENST00000538363 ACIN1Q9UKV3 1341 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-211ENST00000538363 SHANK2Q9UPX8 1470 aa15.73■□□□□ 0.11
TNFRSF1A-211ENST00000538363 RAB3GAP2Q9H2M9 1393 aa15.73■□□□□ 0.11
TNFRSF1A-211ENST00000538363 DIP2CQ9Y2E4 1556 aa15.72■□□□□ 0.11
TNFRSF1A-211ENST00000538363 MAST1Q9Y2H9 1570 aa15.71■□□□□ 0.11
TNFRSF1A-211ENST00000538363 HFM1A2PYH4 1435 aa15.71■□□□□ 0.11
TNFRSF1A-211ENST00000538363 KIF15Q9NS87 1388 aa15.71■□□□□ 0.11
TNFRSF1A-211ENST00000538363 SIGLEC1Q9BZZ2 1709 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms