RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 HECW1Q76N89 1606 aa13.64□□□□□ -0.23
DDB1-211ENST00000538280 CCDC18Q5T9S5 1454 aa13.63□□□□□ -0.23
DDB1-211ENST00000538280 FGD6Q6ZV73 1430 aa13.63□□□□□ -0.23
DDB1-211ENST00000538280 ARAP3Q8WWN8 1544 aa13.62□□□□□ -0.23
DDB1-211ENST00000538280 ATP10BO94823 1461 aa13.61□□□□□ -0.23
DDB1-211ENST00000538280 BCORL1Q5H9F3 1711 aa13.6□□□□□ -0.23
DDB1-211ENST00000538280 RAPGEF6Q8TEU7 1601 aa13.6□□□□□ -0.23
DDB1-211ENST00000538280 MADDQ8WXG6 1647 aa13.6□□□□□ -0.23
DDB1-211ENST00000538280 NCOA2Q15596 1464 aa13.59□□□□□ -0.23
DDB1-211ENST00000538280 SIGLEC1Q9BZZ2 1709 aa13.59□□□□□ -0.23
DDB1-211ENST00000538280 MYOM3Q5VTT5 1437 aa13.57□□□□□ -0.24
DDB1-211ENST00000538280 PTPRMP28827 1452 aa13.57□□□□□ -0.24
DDB1-211ENST00000538280 MTUS2Q5JR59 1369 aa13.57□□□□□ -0.24
DDB1-211ENST00000538280 TCOF1Q13428 1488 aaKnown RBP13.56□□□□□ -0.24
DDB1-211ENST00000538280 RIMS1Q86UR5 1692 aaKnown RBP13.55□□□□□ -0.24
DDB1-211ENST00000538280 RICTORQ6R327 1708 aa13.55□□□□□ -0.24
DDB1-211ENST00000538280 PTPN23Q9H3S7 1636 aa13.54□□□□□ -0.24
DDB1-211ENST00000538280 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
DDB1-211ENST00000538280 NUP153P49790 1475 aaKnown RBP13.53□□□□□ -0.24
DDB1-211ENST00000538280 RAPGEF3O95398 923 aa13.52□□□□□ -0.25
DDB1-211ENST00000538280 ITGAEP38570 1179 aa13.52□□□□□ -0.25
DDB1-211ENST00000538280 FAM50AQ14320 339 aaKnown RBP13.52□□□□□ -0.25
DDB1-211ENST00000538280 HFM1A2PYH4 1435 aa13.52□□□□□ -0.25
DDB1-211ENST00000538280 GCC2Q8IWJ2 1684 aa13.51□□□□□ -0.25
DDB1-211ENST00000538280 LMTK3Q96Q04 1460 aa13.51□□□□□ -0.25
DDB1-211ENST00000538280 PTPRKQ15262 1439 aa13.51□□□□□ -0.25
DDB1-211ENST00000538280 ACIN1Q9UKV3 1341 aaKnown RBP13.51□□□□□ -0.25
DDB1-211ENST00000538280 ATP1B4Q9UN42 357 aaPredicted RBP13.51□□□□□ -0.25
DDB1-211ENST00000538280 TTC37Q6PGP7 1564 aa13.5□□□□□ -0.25
DDB1-211ENST00000538280 NEO1Q92859 1461 aa13.5□□□□□ -0.25
DDB1-211ENST00000538280 AKNAQ7Z591 1439 aa13.49□□□□□ -0.25
DDB1-211ENST00000538280 SCAF1Q9H7N4 1312 aaKnown RBP13.49□□□□□ -0.25
DDB1-211ENST00000538280 CDK13Q14004 1512 aaKnown RBP13.48□□□□□ -0.25
DDB1-211ENST00000538280 MIA2Q96PC5 1412 aa13.47□□□□□ -0.25
DDB1-211ENST00000538280 TIMELESSQ9UNS1 1208 aa13.47□□□□□ -0.25
DDB1-211ENST00000538280 NAIPQ13075 1403 aa13.47□□□□□ -0.25
DDB1-211ENST00000538280 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.46□□□□□ -0.25
DDB1-211ENST00000538280 CENPBP07199 599 aaPredicted RBP13.44□□□□□ -0.26
DDB1-211ENST00000538280 NEUROD1Q13562 356 aa13.44□□□□□ -0.26
DDB1-211ENST00000538280 FBXO41Q8TF61 875 aa13.44□□□□□ -0.26
DDB1-211ENST00000538280 ZMYM4Q5VZL5 1548 aa13.44□□□□□ -0.26
DDB1-211ENST00000538280 FER1L4A9Z1Z3 1794 aa13.43□□□□□ -0.26
DDB1-211ENST00000538280 MIER1Q8N108 512 aa13.43□□□□□ -0.26
DDB1-211ENST00000538280 CFAP74Q9C0B2 1584 aa13.43□□□□□ -0.26
DDB1-211ENST00000538280 YEATS2Q9ULM3 1422 aa13.42□□□□□ -0.26
DDB1-211ENST00000538280 FANCAO15360 1455 aa13.41□□□□□ -0.26
DDB1-211ENST00000538280 DENND4BO75064 1496 aaPredicted RBP13.41□□□□□ -0.26
DDB1-211ENST00000538280 ZFYVE16Q7Z3T8 1539 aa13.4□□□□□ -0.26
DDB1-211ENST00000538280 ARID4BQ4LE39 1312 aaPredicted RBP13.39□□□□□ -0.27
DDB1-211ENST00000538280 DNMT1P26358 1616 aaKnown RBP13.39□□□□□ -0.27
DDB1-211ENST00000538280 HSPA2P54652 639 aa13.38□□□□□ -0.27
DDB1-211ENST00000538280 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
DDB1-211ENST00000538280 ITSN2Q9NZM3 1697 aa13.36□□□□□ -0.27
DDB1-211ENST00000538280 KIF14Q15058 1648 aa13.35□□□□□ -0.27
DDB1-211ENST00000538280 SIN3AQ96ST3 1273 aa13.35□□□□□ -0.27
DDB1-211ENST00000538280 MYO5CQ9NQX4 1742 aa13.35□□□□□ -0.27
DDB1-211ENST00000538280 TROQ12816 1431 aaPredicted RBP13.34□□□□□ -0.27
DDB1-211ENST00000538280 ROCK1Q13464 1354 aa13.33□□□□□ -0.27
DDB1-211ENST00000538280 POGZQ7Z3K3 1410 aa13.33□□□□□ -0.28
DDB1-211ENST00000538280 PREX1Q8TCU6 1659 aa13.33□□□□□ -0.28
DDB1-211ENST00000538280 DAPK1P53355 1430 aa13.32□□□□□ -0.28
DDB1-211ENST00000538280 PPP1R15AO75807 674 aaPredicted RBP13.32□□□□□ -0.28
DDB1-211ENST00000538280 ARHGEF12Q9NZN5 1544 aa13.32□□□□□ -0.28
DDB1-211ENST00000538280 CROCC2H7BZ55 1655 aa13.31□□□□□ -0.28
DDB1-211ENST00000538280 STRCQ7RTU9 1775 aa13.31□□□□□ -0.28
DDB1-211ENST00000538280 ADGBQ8N7X0 1667 aa13.31□□□□□ -0.28
DDB1-211ENST00000538280 ABCC5O15440 1437 aa13.3□□□□□ -0.28
DDB1-211ENST00000538280 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
DDB1-211ENST00000538280 MLECQ14165 292 aa13.29□□□□□ -0.28
DDB1-211ENST00000538280 SCAPERQ9BY12 1400 aa13.29□□□□□ -0.28
DDB1-211ENST00000538280 MAGI2Q86UL8 1455 aa13.29□□□□□ -0.28
DDB1-211ENST00000538280 PLCH2O75038 1416 aa13.28□□□□□ -0.28
DDB1-211ENST00000538280 ABCA6Q8N139 1617 aa13.28□□□□□ -0.28
DDB1-211ENST00000538280 CDK11AQ9UQ88 783 aaPredicted RBP13.27□□□□□ -0.29
DDB1-211ENST00000538280 ADGRL2O95490 1459 aa13.27□□□□□ -0.29
DDB1-211ENST00000538280 CAMSAP2Q08AD1 1489 aa13.27□□□□□ -0.29
DDB1-211ENST00000538280 KDM5CP41229 1560 aa13.27□□□□□ -0.29
DDB1-211ENST00000538280 DIP2CQ9Y2E4 1556 aa13.27□□□□□ -0.29
DDB1-211ENST00000538280 C9orf84Q5VXU9 1444 aa13.26□□□□□ -0.29
DDB1-211ENST00000538280 GPATCH8Q9UKJ3 1502 aaKnown RBP13.26□□□□□ -0.29
DDB1-211ENST00000538280 CDC42BPBQ9Y5S2 1711 aa13.26□□□□□ -0.29
DDB1-211ENST00000538280 TONSLQ96HA7 1378 aa13.25□□□□□ -0.29
DDB1-211ENST00000538280 GTF3C3Q9Y5Q9 886 aa13.25□□□□□ -0.29
DDB1-211ENST00000538280 CDC42BPAQ5VT25 1732 aa13.25□□□□□ -0.29
DDB1-211ENST00000538280 C3P01024 1663 aa13.24□□□□□ -0.29
DDB1-211ENST00000538280 ATP10AO60312 1499 aa13.24□□□□□ -0.29
DDB1-211ENST00000538280 CEBPAP49715 358 aaPredicted RBP13.23□□□□□ -0.29
DDB1-211ENST00000538280 CERKQ8TCT0 537 aa13.22□□□□□ -0.29
DDB1-211ENST00000538280 RRP7BPQ9NSQ0 103 aa13.22□□□□□ -0.29
DDB1-211ENST00000538280 ARHGAP5Q13017 1502 aa13.22□□□□□ -0.29
DDB1-211ENST00000538280 PREX2Q70Z35 1606 aa13.21□□□□□ -0.29
DDB1-211ENST00000538280 YTHDC1Q96MU7 727 aaKnown RBP13.21□□□□□ -0.29
DDB1-211ENST00000538280 SHANK2Q9UPX8 1470 aa13.21□□□□□ -0.3
DDB1-211ENST00000538280 REREQ9P2R6 1566 aa13.2□□□□□ -0.3
DDB1-211ENST00000538280 ABCC1P33527 1531 aa13.19□□□□□ -0.3
DDB1-211ENST00000538280 ZNF518AQ6AHZ1 1483 aa13.19□□□□□ -0.3
DDB1-211ENST00000538280 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
DDB1-211ENST00000538280 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
DDB1-211ENST00000538280 PZPP20742 1482 aa13.17□□□□□ -0.3
DDB1-211ENST00000538280 RPRD2Q5VT52 1461 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms