RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 L3MBTL2Q969R5 705 aa15.96■□□□□ 0.14
CIT-208ENST00000537607 MORC1Q86VD1 984 aa15.95■□□□□ 0.14
CIT-208ENST00000537607 DDRGK1Q96HY6 314 aa15.94■□□□□ 0.14
CIT-208ENST00000537607 KIF3BO15066 747 aa15.94■□□□□ 0.14
CIT-208ENST00000537607 HDGFP51858 240 aaKnown RBP15.91■□□□□ 0.14
CIT-208ENST00000537607 ROCK2O75116 1388 aaKnown RBP15.91■□□□□ 0.14
CIT-208ENST00000537607 FANCD2Q9BXW9 1451 aa15.9■□□□□ 0.14
CIT-208ENST00000537607 KTN1Q86UP2 1357 aaKnown RBP15.88■□□□□ 0.13
CIT-208ENST00000537607 CCDC18Q5T9S5 1454 aa15.86■□□□□ 0.13
CIT-208ENST00000537607 SPAG9O60271 1321 aaKnown RBP15.86■□□□□ 0.13
CIT-208ENST00000537607 PNNQ9H307 717 aaKnown RBP15.86■□□□□ 0.13
CIT-208ENST00000537607 RSPH4AQ5TD94 716 aa15.84■□□□□ 0.13
CIT-208ENST00000537607 MS4A1P11836 297 aa15.83■□□□□ 0.13
CIT-208ENST00000537607 HDGFL2Q7Z4V5 671 aaPredicted RBP15.82■□□□□ 0.12
CIT-208ENST00000537607 U2AF1L5P0DN76 240 aaPredicted RBP15.82■□□□□ 0.12
CIT-208ENST00000537607 U2AF1Q01081 240 aaKnown RBP eCLIP15.82■□□□□ 0.12
CIT-208ENST00000537607 CASC1Q6TDU7 716 aa15.82■□□□□ 0.12
CIT-208ENST00000537607 NUTM2DQ5VT03 806 aaPredicted RBP15.81■□□□□ 0.12
CIT-208ENST00000537607 DHX57Q6P158 1386 aaKnown RBP15.81■□□□□ 0.12
CIT-208ENST00000537607 GOLGA6L22H0YM25 854 aa15.8■□□□□ 0.12
CIT-208ENST00000537607 RALBP1Q15311 655 aa15.8■□□□□ 0.12
CIT-208ENST00000537607 CHMP4BQ9H444 224 aaKnown RBP15.8■□□□□ 0.12
CIT-208ENST00000537607 IGF1RP08069 1367 aa15.8■□□□□ 0.12
CIT-208ENST00000537607 WASHC2CQ9Y4E1 1318 aa15.79■□□□□ 0.12
CIT-208ENST00000537607 NCLP19338 710 aaKnown RBP15.79■□□□□ 0.12
CIT-208ENST00000537607 OS9Q13438 667 aaPredicted RBP15.77■□□□□ 0.11
CIT-208ENST00000537607 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
CIT-208ENST00000537607 RCAN3Q9UKA8 241 aa15.76■□□□□ 0.11
CIT-208ENST00000537607 PTPRGP23470 1445 aa15.76■□□□□ 0.11
CIT-208ENST00000537607 TPRNQ4KMQ1 711 aa15.76■□□□□ 0.11
CIT-208ENST00000537607 ST20-MTHFSA0A0A6YYL1 179 aa15.75■□□□□ 0.11
CIT-208ENST00000537607 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
CIT-208ENST00000537607 PAK3O75914 559 aaPredicted RBP15.74■□□□□ 0.11
CIT-208ENST00000537607 ANP32EQ9BTT0 268 aa15.74■□□□□ 0.11
CIT-208ENST00000537607 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
CIT-208ENST00000537607 TRAK1Q9UPV9 953 aa15.73■□□□□ 0.11
CIT-208ENST00000537607 NLRP13Q86W25 1043 aa15.72■□□□□ 0.11
CIT-208ENST00000537607 NOP58Q9Y2X3 529 aaKnown RBP15.72■□□□□ 0.11
CIT-208ENST00000537607 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
CIT-208ENST00000537607 EIF3AQ14152 1382 aaKnown RBP15.71■□□□□ 0.11
CIT-208ENST00000537607 TRIM44Q96DX7 344 aaPredicted RBP15.7■□□□□ 0.1
CIT-208ENST00000537607 CCDC144AA2RUR9 1427 aa15.69■□□□□ 0.1
CIT-208ENST00000537607 TERF2IPQ9NYB0 399 aa15.68■□□□□ 0.1
CIT-208ENST00000537607 CCDC146Q8IYE0 955 aa15.68■□□□□ 0.1
CIT-208ENST00000537607 APBB1O00213 710 aa15.68■□□□□ 0.1
CIT-208ENST00000537607 NUTM2FA1L443 756 aa15.67■□□□□ 0.1
CIT-208ENST00000537607 KCNJ4P48050 445 aa15.67■□□□□ 0.1
CIT-208ENST00000537607 IPO8O15397 1037 aaKnown RBP15.67■□□□□ 0.1
CIT-208ENST00000537607 RBM19Q9Y4C8 960 aaKnown RBP15.67■□□□□ 0.1
CIT-208ENST00000537607 HSP90AB1P08238 724 aaKnown RBP15.67■□□□□ 0.1
CIT-208ENST00000537607 NPHP1O15259 732 aa15.67■□□□□ 0.1
CIT-208ENST00000537607 ZNF644Q9H582 1327 aaPredicted RBP15.66■□□□□ 0.1
CIT-208ENST00000537607 TAOK2Q9UL54 1235 aa15.66■□□□□ 0.1
CIT-208ENST00000537607 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
CIT-208ENST00000537607 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
CIT-208ENST00000537607 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
CIT-208ENST00000537607 FGD1P98174 961 aa15.65■□□□□ 0.1
CIT-208ENST00000537607 PANK3Q9H999 370 aa15.65■□□□□ 0.1
CIT-208ENST00000537607 ERICH6BQ5W0A0 696 aa15.64■□□□□ 0.09
CIT-208ENST00000537607 ITPRIPQ8IWB1 547 aa15.64■□□□□ 0.09
CIT-208ENST00000537607 CLUAP1Q96AJ1 413 aa15.63■□□□□ 0.09
CIT-208ENST00000537607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.63■□□□□ 0.09
CIT-208ENST00000537607 CALD1Q05682 793 aaKnown RBP15.63■□□□□ 0.09
CIT-208ENST00000537607 EID1Q9Y6B2 187 aa15.63■□□□□ 0.09
CIT-208ENST00000537607 AQRO60306 1485 aaKnown RBP eCLIP15.62■□□□□ 0.092e-7■■■■■ 42.6
CIT-208ENST00000537607 ZRSR1Q15695 479 aaKnown RBP15.62■□□□□ 0.09
CIT-208ENST00000537607 PRKRIP1Q9H875 184 aaPredicted RBP15.62■□□□□ 0.09
CIT-208ENST00000537607 CSB-PGBD3P0DP91 1061 aa15.62■□□□□ 0.09
CIT-208ENST00000537607 NGDNQ8NEJ9 315 aaKnown RBP15.61■□□□□ 0.09
CIT-208ENST00000537607 SPRYD3Q8NCJ5 442 aa15.61■□□□□ 0.09
CIT-208ENST00000537607 PHLDB1Q86UU1 1377 aa15.6■□□□□ 0.09
CIT-208ENST00000537607 PTMAP06454 111 aaKnown RBP15.6■□□□□ 0.09
CIT-208ENST00000537607 SMC4Q9NTJ3 1288 aa15.6■□□□□ 0.09
CIT-208ENST00000537607 HSCBQ8IWL3 235 aa15.6■□□□□ 0.09
CIT-208ENST00000537607 USP47Q96K76 1375 aa15.59■□□□□ 0.09
CIT-208ENST00000537607 KIF15Q9NS87 1388 aa15.59■□□□□ 0.09
CIT-208ENST00000537607 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
CIT-208ENST00000537607 NAP1L2Q9ULW6 460 aaPredicted RBP15.59■□□□□ 0.09
CIT-208ENST00000537607 FGD6Q6ZV73 1430 aa15.59■□□□□ 0.09
CIT-208ENST00000537607 RWDD1Q9H446 243 aaPredicted RBP15.59■□□□□ 0.09
CIT-208ENST00000537607 MYBBP1AQ9BQG0 1328 aaKnown RBP15.58■□□□□ 0.09
CIT-208ENST00000537607 RRP7AQ9Y3A4 280 aaKnown RBP15.58■□□□□ 0.08
CIT-208ENST00000537607 MYOM3Q5VTT5 1437 aa15.58■□□□□ 0.08
CIT-208ENST00000537607 PDE3BQ13370 1112 aa15.57■□□□□ 0.08
CIT-208ENST00000537607 KIF21BO75037 1637 aa15.57■□□□□ 0.08
CIT-208ENST00000537607 VGFO15240 615 aaPredicted RBP15.57■□□□□ 0.08
CIT-208ENST00000537607 ZNF330Q9Y3S2 320 aaPredicted RBP15.56■□□□□ 0.08
CIT-208ENST00000537607 PLCB2Q00722 1185 aa15.56■□□□□ 0.08
CIT-208ENST00000537607 LTV1Q96GA3 475 aaPredicted RBP15.55■□□□□ 0.08
CIT-208ENST00000537607 CENPJQ9HC77 1338 aaPredicted RBP15.55■□□□□ 0.08
CIT-208ENST00000537607 STK31Q9BXU1 1019 aa15.55■□□□□ 0.08
CIT-208ENST00000537607 TCERG1O14776 1098 aaKnown RBP15.55■□□□□ 0.08
CIT-208ENST00000537607 AMPHP49418 695 aa15.55■□□□□ 0.08
CIT-208ENST00000537607 CDK11BP21127 795 aaKnown RBP15.53■□□□□ 0.08
CIT-208ENST00000537607 MINK1Q8N4C8 1332 aaPredicted RBP15.52■□□□□ 0.08
CIT-208ENST00000537607 MCCP23508 829 aa15.52■□□□□ 0.08
CIT-208ENST00000537607 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.08
CIT-208ENST00000537607 UACAQ9BZF9 1416 aa15.52■□□□□ 0.07
CIT-208ENST00000537607 SLC4A10Q6U841 1118 aa15.51■□□□□ 0.07
CIT-208ENST00000537607 PMFBP1Q8TBY8 1022 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms