RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 ZNF777Q9ULD5 760 aaPredicted RBP23.91■■□□□ 1.42
SFSWAP-206ENST00000537582 PLCH2O75038 1416 aa23.9■■□□□ 1.42
SFSWAP-206ENST00000537582 ARHGAP5Q13017 1502 aa23.89■■□□□ 1.42
SFSWAP-206ENST00000537582 FAM69CQ0P6D2 419 aa23.89■■□□□ 1.41
SFSWAP-206ENST00000537582 TCOF1Q13428 1488 aaKnown RBP23.88■■□□□ 1.41
SFSWAP-206ENST00000537582 CAMSAP2Q08AD1 1489 aa23.87■■□□□ 1.41
SFSWAP-206ENST00000537582 GLI2P10070 1586 aa23.87■■□□□ 1.41
SFSWAP-206ENST00000537582 CD109Q6YHK3 1445 aa23.86■■□□□ 1.41
SFSWAP-206ENST00000537582 ITGAEP38570 1179 aa23.85■■□□□ 1.41
SFSWAP-206ENST00000537582 SAMD9LQ8IVG5 1584 aa23.85■■□□□ 1.41
SFSWAP-206ENST00000537582 MAP3K4Q9Y6R4 1608 aa23.84■■□□□ 1.41
SFSWAP-206ENST00000537582 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
SFSWAP-206ENST00000537582 ARAP3Q8WWN8 1544 aa23.8■■□□□ 1.4
SFSWAP-206ENST00000537582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.8■■□□□ 1.4
SFSWAP-206ENST00000537582 FANCAO15360 1455 aa23.8■■□□□ 1.4
SFSWAP-206ENST00000537582 EFCAB2Q5VUJ9 269 aa23.78■■□□□ 1.4
SFSWAP-206ENST00000537582 PTPRKQ15262 1439 aa23.77■■□□□ 1.4
SFSWAP-206ENST00000537582 HNRNPMP52272 730 aaKnown RBP eCLIP23.76■■□□□ 1.39
SFSWAP-206ENST00000537582 SYCP2Q9BX26 1530 aa23.76■■□□□ 1.39
SFSWAP-206ENST00000537582 ARHGEF12Q9NZN5 1544 aa23.76■■□□□ 1.39
SFSWAP-206ENST00000537582 ABCC1P33527 1531 aa23.74■■□□□ 1.39
SFSWAP-206ENST00000537582 TSPOAP1O95153 1857 aa23.73■■□□□ 1.39
SFSWAP-206ENST00000537582 PPRC1Q5VV67 1664 aaKnown RBP23.73■■□□□ 1.39
SFSWAP-206ENST00000537582 MBD5Q9P267 1494 aa23.73■■□□□ 1.39
SFSWAP-206ENST00000537582 ABCC5O15440 1437 aa23.73■■□□□ 1.39
SFSWAP-206ENST00000537582 DAPK1P53355 1430 aa23.72■■□□□ 1.39
SFSWAP-206ENST00000537582 DNMT1P26358 1616 aaKnown RBP23.72■■□□□ 1.39
SFSWAP-206ENST00000537582 AKNAQ7Z591 1439 aa23.7■■□□□ 1.38
SFSWAP-206ENST00000537582 TRHP20396 242 aaPredicted RBP23.69■■□□□ 1.38
SFSWAP-206ENST00000537582 ADGRL1O94910 1474 aa23.69■■□□□ 1.38
SFSWAP-206ENST00000537582 PLEKHH2Q8IVE3 1493 aa23.68■■□□□ 1.38
SFSWAP-206ENST00000537582 CHIC2Q9UKJ5 165 aa23.68■■□□□ 1.38
SFSWAP-206ENST00000537582 KIAA1107Q9UPP5 1409 aa23.68■■□□□ 1.38
SFSWAP-206ENST00000537582 TRAPPC8Q9Y2L5 1435 aa23.67■■□□□ 1.38
SFSWAP-206ENST00000537582 ARHGEF5Q12774 1597 aa23.66■■□□□ 1.38
SFSWAP-206ENST00000537582 CFAP74Q9C0B2 1584 aa23.66■■□□□ 1.38
SFSWAP-206ENST00000537582 SCAPERQ9BY12 1400 aa23.66■■□□□ 1.38
SFSWAP-206ENST00000537582 NEO1Q92859 1461 aa23.65■■□□□ 1.38
SFSWAP-206ENST00000537582 CROCC2H7BZ55 1655 aa23.64■■□□□ 1.38
SFSWAP-206ENST00000537582 CCDC141Q6ZP82 1450 aa23.64■■□□□ 1.37
SFSWAP-206ENST00000537582 AFAP1Q8N556 730 aa23.61■■□□□ 1.37
SFSWAP-206ENST00000537582 TEX14Q8IWB6 1497 aa23.6■■□□□ 1.37
SFSWAP-206ENST00000537582 C9orf84Q5VXU9 1444 aa23.59■■□□□ 1.37
SFSWAP-206ENST00000537582 RRP7BPQ9NSQ0 103 aa23.57■■□□□ 1.36
SFSWAP-206ENST00000537582 SHANK2Q9UPX8 1470 aa23.57■■□□□ 1.36
SFSWAP-206ENST00000537582 POGZQ7Z3K3 1410 aa23.56■■□□□ 1.36
SFSWAP-206ENST00000537582 RAPGEF3O95398 923 aa23.56■■□□□ 1.36
SFSWAP-206ENST00000537582 TSPY4P0CV99 314 aa23.54■■□□□ 1.36
SFSWAP-206ENST00000537582 TSPY10P0CW01 314 aa23.54■■□□□ 1.36
SFSWAP-206ENST00000537582 RSPH4AQ5TD94 716 aa23.54■■□□□ 1.36
SFSWAP-206ENST00000537582 DENND4BO75064 1496 aaPredicted RBP23.53■■□□□ 1.36
SFSWAP-206ENST00000537582 ADGRL2O95490 1459 aa23.53■■□□□ 1.36
SFSWAP-206ENST00000537582 ADGBQ8N7X0 1667 aa23.52■■□□□ 1.36
SFSWAP-206ENST00000537582 MAST1Q9Y2H9 1570 aa23.52■■□□□ 1.36
SFSWAP-206ENST00000537582 COL17A1Q9UMD9 1497 aaPredicted RBP23.52■■□□□ 1.36
SFSWAP-206ENST00000537582 FRMPD1Q5SYB0 1578 aa23.51■■□□□ 1.35
SFSWAP-206ENST00000537582 ZNF518AQ6AHZ1 1483 aa23.51■■□□□ 1.35
SFSWAP-206ENST00000537582 NAIPQ13075 1403 aa23.51■■□□□ 1.35
SFSWAP-206ENST00000537582 NCOA1Q15788 1441 aa23.51■■□□□ 1.35
SFSWAP-206ENST00000537582 ROCK1Q13464 1354 aa23.51■■□□□ 1.35
SFSWAP-206ENST00000537582 HFM1A2PYH4 1435 aa23.5■■□□□ 1.35
SFSWAP-206ENST00000537582 SPAG9O60271 1321 aaKnown RBP23.5■■□□□ 1.35
SFSWAP-206ENST00000537582 ZFYVE16Q7Z3T8 1539 aa23.5■■□□□ 1.35
SFSWAP-206ENST00000537582 RICTORQ6R327 1708 aa23.5■■□□□ 1.35
SFSWAP-206ENST00000537582 KDM5CP41229 1560 aa23.49■■□□□ 1.35
SFSWAP-206ENST00000537582 INO80Q9ULG1 1556 aaPredicted RBP23.48■■□□□ 1.35
SFSWAP-206ENST00000537582 ANKRD30AQ9BXX3 1397 aa23.48■■□□□ 1.35
SFSWAP-206ENST00000537582 KDM6BO15054 1643 aa23.48■■□□□ 1.35
SFSWAP-206ENST00000537582 SETD5Q9C0A6 1442 aa23.47■■□□□ 1.35
SFSWAP-206ENST00000537582 RAB3GAP2Q9H2M9 1393 aa23.47■■□□□ 1.35
SFSWAP-206ENST00000537582 ATP7AQ04656 1500 aa23.46■■□□□ 1.35
SFSWAP-206ENST00000537582 GCC2Q8IWJ2 1684 aa23.45■■□□□ 1.34
SFSWAP-206ENST00000537582 KIF15Q9NS87 1388 aa23.45■■□□□ 1.34
SFSWAP-206ENST00000537582 MYT1LQ9UL68 1186 aa23.44■■□□□ 1.34
SFSWAP-206ENST00000537582 RTEL1-TNFRSF6BF6WH68 1400 aa23.43■■□□□ 1.34
SFSWAP-206ENST00000537582 KIDINS220Q9ULH0 1771 aa23.43■■□□□ 1.34
SFSWAP-206ENST00000537582 PLXNC1O60486 1568 aa23.43■■□□□ 1.34
SFSWAP-206ENST00000537582 HECW2Q9P2P5 1572 aa23.41■■□□□ 1.34
SFSWAP-206ENST00000537582 MLH3Q9UHC1 1453 aa23.41■■□□□ 1.34
SFSWAP-206ENST00000537582 YEATS2Q9ULM3 1422 aa23.38■■□□□ 1.33
SFSWAP-206ENST00000537582 ZMYM4Q5VZL5 1548 aa23.38■■□□□ 1.33
SFSWAP-206ENST00000537582 ABCA6Q8N139 1617 aa23.37■■□□□ 1.33
SFSWAP-206ENST00000537582 ANKRD50Q9ULJ7 1429 aa23.36■■□□□ 1.33
SFSWAP-206ENST00000537582 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
SFSWAP-206ENST00000537582 DIP2CQ9Y2E4 1556 aa23.33■■□□□ 1.33
SFSWAP-206ENST00000537582 A2MP01023 1474 aa23.28■■□□□ 1.32
SFSWAP-206ENST00000537582 MAGI2Q86UL8 1455 aa23.27■■□□□ 1.32
SFSWAP-206ENST00000537582 ERBINQ96RT1 1412 aa23.27■■□□□ 1.32
SFSWAP-206ENST00000537582 DHX29Q7Z478 1369 aaKnown RBP23.27■■□□□ 1.32
SFSWAP-206ENST00000537582 HRCP23327 699 aa23.26■■□□□ 1.31
SFSWAP-206ENST00000537582 ARHGEF40Q8TER5 1519 aa23.24■■□□□ 1.31
SFSWAP-206ENST00000537582 TRIM52Q96A61 297 aa23.24■■□□□ 1.31
SFSWAP-206ENST00000537582 DHX57Q6P158 1386 aaKnown RBP23.23■■□□□ 1.31
SFSWAP-206ENST00000537582 ATP10AO60312 1499 aa23.21■■□□□ 1.31
SFSWAP-206ENST00000537582 KIF3BO15066 747 aa23.2■■□□□ 1.3
SFSWAP-206ENST00000537582 SIGLEC1Q9BZZ2 1709 aa23.2■■□□□ 1.3
SFSWAP-206ENST00000537582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.18■■□□□ 1.37e-6■□□□□ 10.8
SFSWAP-206ENST00000537582 UNC13BO14795 1591 aa23.18■■□□□ 1.3
SFSWAP-206ENST00000537582 EIF2AK4Q9P2K8 1649 aaKnown RBP23.18■■□□□ 1.3
SFSWAP-206ENST00000537582 CCER1Q8TC90 406 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms