RNA–Protein interactions for RNA: ENST00000537022.5

COPS7A-206, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 4

Gene COPS7A, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-206ENST00000537022 YEATS2Q9ULM3 1422 aa22.68■■□□□ 1.22
COPS7A-206ENST00000537022 LMTK3Q96Q04 1460 aa22.67■■□□□ 1.22
COPS7A-206ENST00000537022 SCAPERQ9BY12 1400 aa22.67■■□□□ 1.22
COPS7A-206ENST00000537022 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
COPS7A-206ENST00000537022 FER1L4A9Z1Z3 1794 aa22.66■■□□□ 1.22
COPS7A-206ENST00000537022 CDK11AQ9UQ88 783 aaPredicted RBP22.66■■□□□ 1.22
COPS7A-206ENST00000537022 TROQ12816 1431 aaPredicted RBP22.64■■□□□ 1.21
COPS7A-206ENST00000537022 ATP1B4Q9UN42 357 aaPredicted RBP22.62■■□□□ 1.21
COPS7A-206ENST00000537022 EFCAB2Q5VUJ9 269 aa22.61■■□□□ 1.21
COPS7A-206ENST00000537022 EHMT2Q96KQ7 1210 aa22.61■■□□□ 1.21
COPS7A-206ENST00000537022 CLIP1P30622 1438 aa22.6■■□□□ 1.21
COPS7A-206ENST00000537022 ATP10AO60312 1499 aa22.6■■□□□ 1.21
COPS7A-206ENST00000537022 CDC42BPBQ9Y5S2 1711 aa22.59■■□□□ 1.21
COPS7A-206ENST00000537022 ZNF518AQ6AHZ1 1483 aa22.59■■□□□ 1.21
COPS7A-206ENST00000537022 KDM5CP41229 1560 aa22.59■■□□□ 1.21
COPS7A-206ENST00000537022 C9orf84Q5VXU9 1444 aa22.58■■□□□ 1.21
COPS7A-206ENST00000537022 ARHGAP5Q13017 1502 aa22.58■■□□□ 1.21
COPS7A-206ENST00000537022 ARHGEF12Q9NZN5 1544 aa22.57■■□□□ 1.2
COPS7A-206ENST00000537022 CCDC18Q5T9S5 1454 aa22.55■■□□□ 1.2
COPS7A-206ENST00000537022 PREX2Q70Z35 1606 aa22.55■■□□□ 1.2
COPS7A-206ENST00000537022 FBXO41Q8TF61 875 aa22.53■■□□□ 1.2
COPS7A-206ENST00000537022 CASKIN1Q8WXD9 1431 aa22.53■■□□□ 1.2
COPS7A-206ENST00000537022 REREQ9P2R6 1566 aa22.52■■□□□ 1.2
COPS7A-206ENST00000537022 PREX1Q8TCU6 1659 aa22.51■■□□□ 1.19
COPS7A-206ENST00000537022 DIP2CQ9Y2E4 1556 aa22.5■■□□□ 1.19
COPS7A-206ENST00000537022 ITSN2Q9NZM3 1697 aa22.49■■□□□ 1.19
COPS7A-206ENST00000537022 MLECQ14165 292 aa22.49■■□□□ 1.19
COPS7A-206ENST00000537022 CDC42BPAQ5VT25 1732 aa22.48■■□□□ 1.19
COPS7A-206ENST00000537022 ABCC1P33527 1531 aa22.48■■□□□ 1.19
COPS7A-206ENST00000537022 ABCA6Q8N139 1617 aa22.46■■□□□ 1.19
COPS7A-206ENST00000537022 FYCO1Q9BQS8 1478 aa22.46■■□□□ 1.19
COPS7A-206ENST00000537022 MLH3Q9UHC1 1453 aa22.46■■□□□ 1.19
COPS7A-206ENST00000537022 AFAP1Q8N556 730 aa22.44■■□□□ 1.18
COPS7A-206ENST00000537022 HSPA2P54652 639 aa22.43■■□□□ 1.18
COPS7A-206ENST00000537022 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
COPS7A-206ENST00000537022 SETD1BQ9UPS6 1966 aaKnown RBP22.43■■□□□ 1.18
COPS7A-206ENST00000537022 AGLP35573 1532 aa22.41■■□□□ 1.18
COPS7A-206ENST00000537022 KIDINS220Q9ULH0 1771 aa22.4■■□□□ 1.18
COPS7A-206ENST00000537022 TRAPPC8Q9Y2L5 1435 aa22.39■■□□□ 1.17
COPS7A-206ENST00000537022 C3P01024 1663 aa22.37■■□□□ 1.17
COPS7A-206ENST00000537022 MYT1LQ9UL68 1186 aa22.35■■□□□ 1.17
COPS7A-206ENST00000537022 SAMD9LQ8IVG5 1584 aa22.34■■□□□ 1.17
COPS7A-206ENST00000537022 STRCQ7RTU9 1775 aa22.33■■□□□ 1.17
COPS7A-206ENST00000537022 UHRF1BP1Q6BDS2 1440 aa22.31■■□□□ 1.16
COPS7A-206ENST00000537022 CEBPAP49715 358 aaPredicted RBP22.31■■□□□ 1.16
COPS7A-206ENST00000537022 GPATCH8Q9UKJ3 1502 aaKnown RBP22.3■■□□□ 1.16
COPS7A-206ENST00000537022 SYCP2Q9BX26 1530 aa22.29■■□□□ 1.16
COPS7A-206ENST00000537022 MROH2AA6NES4 1674 aa22.28■■□□□ 1.16
COPS7A-206ENST00000537022 CNTLNQ9NXG0 1405 aa22.27■■□□□ 1.16
COPS7A-206ENST00000537022 PLEKHH2Q8IVE3 1493 aa22.26■■□□□ 1.15
COPS7A-206ENST00000537022 INO80Q9ULG1 1556 aaPredicted RBP22.25■■□□□ 1.15
COPS7A-206ENST00000537022 KIAA1107Q9UPP5 1409 aa22.24■■□□□ 1.15
COPS7A-206ENST00000537022 CERKQ8TCT0 537 aa22.24■■□□□ 1.15
COPS7A-206ENST00000537022 SUPT6HQ7KZ85 1726 aaKnown RBP22.23■■□□□ 1.15
COPS7A-206ENST00000537022 ATP7AQ04656 1500 aa22.23■■□□□ 1.15
COPS7A-206ENST00000537022 ESF1Q9H501 851 aaKnown RBP22.23■■□□□ 1.15
COPS7A-206ENST00000537022 DMRT2Q9Y5R5 561 aa22.23■■□□□ 1.15
COPS7A-206ENST00000537022 PLXNC1O60486 1568 aa22.21■■□□□ 1.15
COPS7A-206ENST00000537022 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
COPS7A-206ENST00000537022 SPAG9O60271 1321 aaKnown RBP22.2■■□□□ 1.14
COPS7A-206ENST00000537022 CCNB3Q8WWL7 1395 aa22.19■■□□□ 1.14
COPS7A-206ENST00000537022 ADGBQ8N7X0 1667 aa22.18■■□□□ 1.14
COPS7A-206ENST00000537022 TIAM1Q13009 1591 aa22.17■■□□□ 1.14
COPS7A-206ENST00000537022 EHBP1L1Q8N3D4 1523 aa22.17■■□□□ 1.14
COPS7A-206ENST00000537022 PTPRTO14522 1441 aa22.17■■□□□ 1.14
COPS7A-206ENST00000537022 NPATQ14207 1427 aa22.17■■□□□ 1.14
COPS7A-206ENST00000537022 MTUS2Q5JR59 1369 aa22.17■■□□□ 1.14
COPS7A-206ENST00000537022 CFDP1Q9UEE9 299 aaPredicted RBP22.17■■□□□ 1.14
COPS7A-206ENST00000537022 HNRNPMP52272 730 aaKnown RBP eCLIP22.16■■□□□ 1.14
COPS7A-206ENST00000537022 CLTCQ00610 1675 aaKnown RBP22.15■■□□□ 1.14
COPS7A-206ENST00000537022 A2MP01023 1474 aa22.14■■□□□ 1.13
COPS7A-206ENST00000537022 ZNF142P52746 1687 aaPredicted RBP22.12■■□□□ 1.13
COPS7A-206ENST00000537022 NCOA1Q15788 1441 aa22.11■■□□□ 1.13
COPS7A-206ENST00000537022 CEP162Q5TB80 1403 aa22.1■■□□□ 1.13
COPS7A-206ENST00000537022 ZMYM3Q14202 1370 aa22.1■■□□□ 1.13
COPS7A-206ENST00000537022 MYO3AQ8NEV4 1616 aa22.09■■□□□ 1.13
COPS7A-206ENST00000537022 CAMSAP1Q5T5Y3 1602 aa22.08■■□□□ 1.13
COPS7A-206ENST00000537022 MBD5Q9P267 1494 aa22.08■■□□□ 1.12
COPS7A-206ENST00000537022 LTBP4Q8N2S1 1624 aa22.06■■□□□ 1.12
COPS7A-206ENST00000537022 RTEL1-TNFRSF6BF6WH68 1400 aa22.06■■□□□ 1.12
COPS7A-206ENST00000537022 PPP6R1Q9UPN7 881 aa22.04■■□□□ 1.12
COPS7A-206ENST00000537022 IQSEC2Q5JU85 1478 aa22.03■■□□□ 1.12
COPS7A-206ENST00000537022 PTPRKQ15262 1439 aa22.03■■□□□ 1.12
COPS7A-206ENST00000537022 CEP170BQ9Y4F5 1589 aaPredicted RBP22.03■■□□□ 1.12
COPS7A-206ENST00000537022 ZNF644Q9H582 1327 aaPredicted RBP22.02■■□□□ 1.12
COPS7A-206ENST00000537022 PLA2R1Q13018 1463 aa22.01■■□□□ 1.11
COPS7A-206ENST00000537022 NCOA2Q15596 1464 aa21.99■■□□□ 1.11
COPS7A-206ENST00000537022 FAM135AQ9P2D6 1515 aa21.99■■□□□ 1.11
COPS7A-206ENST00000537022 CCDC141Q6ZP82 1450 aa21.98■■□□□ 1.11
COPS7A-206ENST00000537022 GGT6Q6P531 493 aa21.98■■□□□ 1.11
COPS7A-206ENST00000537022 CAMSAP2Q08AD1 1489 aa21.97■■□□□ 1.11
COPS7A-206ENST00000537022 DHX29Q7Z478 1369 aaKnown RBP21.97■■□□□ 1.11
COPS7A-206ENST00000537022 ARHGEF5Q12774 1597 aa21.95■■□□□ 1.11
COPS7A-206ENST00000537022 TCOF1Q13428 1488 aaKnown RBP21.95■■□□□ 1.1
COPS7A-206ENST00000537022 RSPH4AQ5TD94 716 aa21.93■■□□□ 1.1
COPS7A-206ENST00000537022 KDM5DQ9BY66 1539 aa21.92■■□□□ 1.1
COPS7A-206ENST00000537022 A2ML1A8K2U0 1454 aa21.92■■□□□ 1.1
COPS7A-206ENST00000537022 PKD2Q13563 968 aa21.92■■□□□ 1.1
COPS7A-206ENST00000537022 DNMT1P26358 1616 aaKnown RBP21.91■■□□□ 1.1
COPS7A-206ENST00000537022 POLR1AO95602 1720 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms