RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 DPY19L2Q6NUT2 758 aa14.02□□□□□ -0.17
CCDC60-203ENST00000536742 FAM163AQ96GL9 167 aaPredicted RBP14.02□□□□□ -0.17
CCDC60-203ENST00000536742 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
CCDC60-203ENST00000536742 BOLA1Q9Y3E2 137 aa13.98□□□□□ -0.17
CCDC60-203ENST00000536742 PAXIP1Q6ZW49 1069 aaPredicted RBP13.97□□□□□ -0.17
CCDC60-203ENST00000536742 CFAP44Q96MT7 982 aa13.93□□□□□ -0.18
CCDC60-203ENST00000536742 PHF8Q9UPP1 1060 aa13.93□□□□□ -0.18
CCDC60-203ENST00000536742 NLRP6P59044 892 aa13.92□□□□□ -0.18
CCDC60-203ENST00000536742 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
CCDC60-203ENST00000536742 SNPHO15079 494 aa13.91□□□□□ -0.18
CCDC60-203ENST00000536742 NKX1-1Q15270 411 aaPredicted RBP13.91□□□□□ -0.18
CCDC60-203ENST00000536742 POTEMA6NI47 508 aa13.88□□□□□ -0.19
CCDC60-203ENST00000536742 HAP1P54257 671 aaPredicted RBP13.87□□□□□ -0.19
CCDC60-203ENST00000536742 POTEGQ6S5H5 508 aa13.86□□□□□ -0.19
CCDC60-203ENST00000536742 GTPBP6O43824 516 aaPredicted RBP13.85□□□□□ -0.19
CCDC60-203ENST00000536742 MS4A4AQ96JQ5 239 aa13.85□□□□□ -0.19
CCDC60-203ENST00000536742 TMEM121BQ9BXQ6 578 aaPredicted RBP13.84□□□□□ -0.19
CCDC60-203ENST00000536742 MICALL2Q8IY33 904 aa13.82□□□□□ -0.2
CCDC60-203ENST00000536742 BAZ1AQ9NRL2 1556 aaPredicted RBP13.81□□□□□ -0.2
CCDC60-203ENST00000536742 FBXO22Q8NEZ5 403 aa13.81□□□□□ -0.2
CCDC60-203ENST00000536742 MFRPQ9BY79 579 aa13.81□□□□□ -0.2
CCDC60-203ENST00000536742 NESP48681 1621 aa13.8□□□□□ -0.2
CCDC60-203ENST00000536742 LCE2DQ5TA82 110 aaPredicted RBP13.8□□□□□ -0.2
CCDC60-203ENST00000536742 ST18O60284 1047 aa13.79□□□□□ -0.2
CCDC60-203ENST00000536742 VSIG10Q8N0Z9 540 aa13.79□□□□□ -0.2
CCDC60-203ENST00000536742 RIMBP3CA6NJZ7 1639 aa13.78□□□□□ -0.2
CCDC60-203ENST00000536742 RIMBP3BA6NNM3 1639 aa13.78□□□□□ -0.2
CCDC60-203ENST00000536742 RIMBP3Q9UFD9 1639 aa13.78□□□□□ -0.2
CCDC60-203ENST00000536742 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
CCDC60-203ENST00000536742 SMARCA2P51531 1590 aa13.7□□□□□ -0.22
CCDC60-203ENST00000536742 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
CCDC60-203ENST00000536742 PCDH10Q9P2E7 1040 aa13.69□□□□□ -0.22
CCDC60-203ENST00000536742 TSHZ2Q9NRE2 1034 aa13.68□□□□□ -0.22
CCDC60-203ENST00000536742 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
CCDC60-203ENST00000536742 DOK7Q18PE1 504 aa13.65□□□□□ -0.22
CCDC60-203ENST00000536742 TMEM92Q6UXU6 159 aa13.64□□□□□ -0.23
CCDC60-203ENST00000536742 CYB5RLQ6IPT4 315 aa13.63□□□□□ -0.23
CCDC60-203ENST00000536742 ARHGEF11O15085 1522 aa13.63□□□□□ -0.23
CCDC60-203ENST00000536742 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
CCDC60-203ENST00000536742 MARVELD3Q96A59 401 aa13.62□□□□□ -0.23
CCDC60-203ENST00000536742 RIMBP2O15034 1052 aa13.61□□□□□ -0.23
CCDC60-203ENST00000536742 PDS5BQ9NTI5 1447 aa13.61□□□□□ -0.23
CCDC60-203ENST00000536742 HOXB3P14651 431 aaPredicted RBP13.6□□□□□ -0.23
CCDC60-203ENST00000536742 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
CCDC60-203ENST00000536742 EMP3P54852 163 aa13.59□□□□□ -0.23
CCDC60-203ENST00000536742 PPP1R37O75864 691 aa13.58□□□□□ -0.24
CCDC60-203ENST00000536742 CDAN1Q8IWY9 1227 aa13.56□□□□□ -0.24
CCDC60-203ENST00000536742 PLSCR2Q9NRY7 297 aa13.56□□□□□ -0.24
CCDC60-203ENST00000536742 TMC2Q8TDI7 906 aa13.55□□□□□ -0.24
CCDC60-203ENST00000536742 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
CCDC60-203ENST00000536742 HMGXB3Q12766 1538 aa13.52□□□□□ -0.25
CCDC60-203ENST00000536742 C2orf72A6NCS6 295 aa13.51□□□□□ -0.25
CCDC60-203ENST00000536742 WDR62O43379 1518 aa13.5□□□□□ -0.25
CCDC60-203ENST00000536742 MRC2Q9UBG0 1479 aa13.5□□□□□ -0.25
CCDC60-203ENST00000536742 HOXB1P14653 301 aaPredicted RBP13.5□□□□□ -0.25
CCDC60-203ENST00000536742 ZSWIM6Q9HCJ5 1215 aa13.5□□□□□ -0.25
CCDC60-203ENST00000536742 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
CCDC60-203ENST00000536742 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
CCDC60-203ENST00000536742 FAM205CA6NFA0 338 aa13.48□□□□□ -0.25
CCDC60-203ENST00000536742 KIF3CO14782 793 aa13.47□□□□□ -0.25
CCDC60-203ENST00000536742 ERBB3P21860 1342 aa13.43□□□□□ -0.26
CCDC60-203ENST00000536742 HS3ST6Q96QI5 342 aa13.43□□□□□ -0.26
CCDC60-203ENST00000536742 WDR70Q9NW82 654 aa13.41□□□□□ -0.26
CCDC60-203ENST00000536742 ARSIQ5FYB1 569 aa13.4□□□□□ -0.26
CCDC60-203ENST00000536742 GPR153Q6NV75 609 aa13.4□□□□□ -0.26
CCDC60-203ENST00000536742 CADPS2Q86UW7 1296 aa13.4□□□□□ -0.26
CCDC60-203ENST00000536742 PDE4AP27815 886 aa13.39□□□□□ -0.27
CCDC60-203ENST00000536742 ARAP1Q96P48 1450 aa13.39□□□□□ -0.27
CCDC60-203ENST00000536742 P3H3Q8IVL6 736 aa13.37□□□□□ -0.27
CCDC60-203ENST00000536742 GPHNQ9NQX3 736 aaPredicted RBP13.37□□□□□ -0.27
CCDC60-203ENST00000536742 BCANQ96GW7 911 aa13.35□□□□□ -0.27
CCDC60-203ENST00000536742 POTEB3A0JP26 581 aa13.34□□□□□ -0.27
CCDC60-203ENST00000536742 SLC34A2O95436 690 aa13.34□□□□□ -0.27
CCDC60-203ENST00000536742 POTEBQ6S5H4 581 aa13.34□□□□□ -0.27
CCDC60-203ENST00000536742 CRISPLD2Q9H0B8 497 aa13.34□□□□□ -0.27
CCDC60-203ENST00000536742 FOXK1P85037 733 aa13.33□□□□□ -0.28
CCDC60-203ENST00000536742 VARS2Q5ST30 1063 aaKnown RBP13.33□□□□□ -0.28
CCDC60-203ENST00000536742 BAZ1BQ9UIG0 1483 aaKnown RBP13.32□□□□□ -0.28
CCDC60-203ENST00000536742 PLPP6Q8IY26 295 aa13.32□□□□□ -0.28
CCDC60-203ENST00000536742 MFSD10Q14728 455 aa13.31□□□□□ -0.28
CCDC60-203ENST00000536742 KHSRPQ92945 711 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCDC60-203ENST00000536742 PCDHGA4Q9Y5G9 962 aa13.3□□□□□ -0.28
CCDC60-203ENST00000536742 NCKAP5LQ9HCH0 1330 aa13.3□□□□□ -0.28
CCDC60-203ENST00000536742 DSG2Q14126 1118 aa13.29□□□□□ -0.28
CCDC60-203ENST00000536742 NUDT7P0C024 238 aa13.27□□□□□ -0.29
CCDC60-203ENST00000536742 DDX27Q96GQ7 796 aaKnown RBP13.27□□□□□ -0.29
CCDC60-203ENST00000536742 LARP6Q9BRS8 491 aaKnown RBP13.27□□□□□ -0.29
CCDC60-203ENST00000536742 CADPSQ9ULU8 1353 aa13.27□□□□□ -0.29
CCDC60-203ENST00000536742 ZNF316A6NFI3 1004 aaPredicted RBP13.26□□□□□ -0.29
CCDC60-203ENST00000536742 TBC1D12O60347 775 aa13.25□□□□□ -0.29
CCDC60-203ENST00000536742 RSF1Q96T23 1441 aaPredicted RBP13.24□□□□□ -0.29
CCDC60-203ENST00000536742 E2F4Q16254 413 aa13.23□□□□□ -0.29
CCDC60-203ENST00000536742 PTCD2Q8WV60 388 aaKnown RBP13.23□□□□□ -0.29
CCDC60-203ENST00000536742 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
CCDC60-203ENST00000536742 ZNF687Q8N1G0 1237 aa13.22□□□□□ -0.29
CCDC60-203ENST00000536742 NBR1Q14596 966 aa13.21□□□□□ -0.29
CCDC60-203ENST00000536742 PPP1R15BQ5SWA1 713 aa13.21□□□□□ -0.29
CCDC60-203ENST00000536742 KRTAP3-3Q9BYR6 98 aa13.21□□□□□ -0.29
CCDC60-203ENST00000536742 KRTAP3-2Q9BYR7 98 aa13.21□□□□□ -0.29
CCDC60-203ENST00000536742 SPNS2Q8IVW8 549 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms