RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 GSE1Q14687 1217 aa9.1□□□□□ -0.95
VPS33A-203ENST00000536212 PSEN1P49768 467 aa9.09□□□□□ -0.95
VPS33A-203ENST00000536212 PLCB2Q00722 1185 aa9.09□□□□□ -0.95
VPS33A-203ENST00000536212 PPARGC1BQ86YN6 1023 aaKnown RBP9.08□□□□□ -0.96
VPS33A-203ENST00000536212 HOXB1P14653 301 aaPredicted RBP9.07□□□□□ -0.96
VPS33A-203ENST00000536212 BAZ1AQ9NRL2 1556 aaPredicted RBP9.07□□□□□ -0.96
VPS33A-203ENST00000536212 WIZO95785 1651 aa9.05□□□□□ -0.96
VPS33A-203ENST00000536212 EIF4G1Q04637 1599 aaKnown RBP9.05□□□□□ -0.96
VPS33A-203ENST00000536212 ZEB1P37275 1124 aaPredicted RBP9.05□□□□□ -0.96
VPS33A-203ENST00000536212 DPY19L2Q6NUT2 758 aa9.05□□□□□ -0.96
VPS33A-203ENST00000536212 BOLA1Q9Y3E2 137 aa9.04□□□□□ -0.96
VPS33A-203ENST00000536212 RNF166Q96A37 237 aaPredicted RBP9.03□□□□□ -0.96
VPS33A-203ENST00000536212 ERBB3P21860 1342 aa9.03□□□□□ -0.96
VPS33A-203ENST00000536212 PDAP1Q13442 181 aaKnown RBP9.02□□□□□ -0.97
VPS33A-203ENST00000536212 DOK7Q18PE1 504 aa9.02□□□□□ -0.97
VPS33A-203ENST00000536212 ZNF710Q8N1W2 664 aa9.02□□□□□ -0.97
VPS33A-203ENST00000536212 G3V3G9 751 aa9.01□□□□□ -0.97
VPS33A-203ENST00000536212 CIZ1Q9ULV3 898 aaPredicted RBP9□□□□□ -0.97
VPS33A-203ENST00000536212 TOP2AP11388 1531 aaKnown RBP8.99□□□□□ -0.97
VPS33A-203ENST00000536212 RGL2O15211 777 aa8.97□□□□□ -0.97
VPS33A-203ENST00000536212 HAP1P54257 671 aaPredicted RBP8.97□□□□□ -0.97
VPS33A-203ENST00000536212 FAM9AQ8IZU1 332 aaPredicted RBP8.97□□□□□ -0.97
VPS33A-203ENST00000536212 MYT1LQ9UL68 1186 aa8.97□□□□□ -0.97
VPS33A-203ENST00000536212 RIMBP2O15034 1052 aa8.96□□□□□ -0.98
VPS33A-203ENST00000536212 CABP2Q9NPB3 220 aa8.96□□□□□ -0.98
VPS33A-203ENST00000536212 SMARCA4P51532 1647 aa8.95□□□□□ -0.98
VPS33A-203ENST00000536212 VARS2Q5ST30 1063 aaKnown RBP8.95□□□□□ -0.98
VPS33A-203ENST00000536212 BBXQ8WY36 941 aaPredicted RBP8.95□□□□□ -0.98
VPS33A-203ENST00000536212 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.95□□□□□ -0.98
VPS33A-203ENST00000536212 PRKCSHP14314 528 aaPredicted RBP8.93□□□□□ -0.98
VPS33A-203ENST00000536212 ZNF687Q8N1G0 1237 aa8.93□□□□□ -0.98
VPS33A-203ENST00000536212 ZSWIM6Q9HCJ5 1215 aa8.93□□□□□ -0.98
VPS33A-203ENST00000536212 SMARCA2P51531 1590 aa8.92□□□□□ -0.98
VPS33A-203ENST00000536212 CCDC88BA6NC98 1476 aa8.92□□□□□ -0.98
VPS33A-203ENST00000536212 PTGER2P43116 358 aa8.92□□□□□ -0.98
VPS33A-203ENST00000536212 WRNQ14191 1432 aaPredicted RBP eCLIP8.89□□□□□ -0.99
VPS33A-203ENST00000536212 TTBK1Q5TCY1 1321 aaPredicted RBP8.88□□□□□ -0.99
VPS33A-203ENST00000536212 EEA1Q15075 1411 aa8.88□□□□□ -0.99
VPS33A-203ENST00000536212 GPR153Q6NV75 609 aa8.87□□□□□ -0.99
VPS33A-203ENST00000536212 CHGAP10645 457 aaKnown RBP8.86□□□□□ -0.99
VPS33A-203ENST00000536212 PAXIP1Q6ZW49 1069 aaPredicted RBP8.86□□□□□ -0.99
VPS33A-203ENST00000536212 UNC13AQ9UPW8 1703 aa8.85□□□□□ -0.99
VPS33A-203ENST00000536212 BCANQ96GW7 911 aa8.85□□□□□ -0.99
VPS33A-203ENST00000536212 CFAP44Q96MT7 982 aa8.85□□□□□ -0.99
VPS33A-203ENST00000536212 PEG3Q9GZU2 1588 aa8.85□□□□□ -0.99
VPS33A-203ENST00000536212 TNIKQ9UKE5 1360 aa8.85□□□□□ -0.99
VPS33A-203ENST00000536212 TMEM92Q6UXU6 159 aa8.84□□□□□ -0.99
VPS33A-203ENST00000536212 VSIG10Q8N0Z9 540 aa8.84□□□□□ -0.99
VPS33A-203ENST00000536212 ABCC8Q09428 1581 aa8.83□□□□□ -1
VPS33A-203ENST00000536212 MICALL2Q8IY33 904 aa8.83□□□□□ -1
VPS33A-203ENST00000536212 BICRAQ9NZM4 1560 aa8.82□□□□□ -1
VPS33A-203ENST00000536212 SPRYD3Q8NCJ5 442 aa8.82□□□□□ -1
VPS33A-203ENST00000536212 TAOK2Q9UL54 1235 aa8.82□□□□□ -1
VPS33A-203ENST00000536212 EFCAB3Q8N7B9 438 aa8.81□□□□□ -1
VPS33A-203ENST00000536212 RNF25Q96BH1 459 aaPredicted RBP8.8□□□□□ -1
VPS33A-203ENST00000536212 SOGA1O94964 1423 aa8.8□□□□□ -1
VPS33A-203ENST00000536212 CEP162Q5TB80 1403 aa8.8□□□□□ -1
VPS33A-203ENST00000536212 HS6ST3Q8IZP7 471 aa8.79□□□□□ -1
VPS33A-203ENST00000536212 RIOK3O14730 519 aaKnown RBP8.78□□□□□ -1
VPS33A-203ENST00000536212 ANKRD13DQ6ZTN6 518 aa8.78□□□□□ -1
VPS33A-203ENST00000536212 GOLGA3Q08378 1498 aa8.76□□□□□ -1.01
VPS33A-203ENST00000536212 LSM11P83369 360 aaKnown RBP eCLIP8.75□□□□□ -1.01
VPS33A-203ENST00000536212 ARSIQ5FYB1 569 aa8.75□□□□□ -1.01
VPS33A-203ENST00000536212 RUSC2Q8N2Y8 1516 aa8.75□□□□□ -1.01
VPS33A-203ENST00000536212 ZNF316A6NFI3 1004 aaPredicted RBP8.74□□□□□ -1.01
VPS33A-203ENST00000536212 ATAD2BQ9ULI0 1458 aa8.73□□□□□ -1.01
VPS33A-203ENST00000536212 SOX12O15370 315 aa8.73□□□□□ -1.01
VPS33A-203ENST00000536212 VGFO15240 615 aaPredicted RBP8.72□□□□□ -1.01
VPS33A-203ENST00000536212 MS4A4AQ96JQ5 239 aa8.72□□□□□ -1.01
VPS33A-203ENST00000536212 DNAJC5Q9H3Z4 198 aa8.72□□□□□ -1.01
VPS33A-203ENST00000536212 KIF21BO75037 1637 aa8.72□□□□□ -1.01
VPS33A-203ENST00000536212 CCER1Q8TC90 406 aaPredicted RBP8.71□□□□□ -1.02
VPS33A-203ENST00000536212 KDM2AQ9Y2K7 1162 aa8.71□□□□□ -1.02
VPS33A-203ENST00000536212 CEP164Q9UPV0 1460 aa8.7□□□□□ -1.02
VPS33A-203ENST00000536212 PBX2P40425 430 aa8.69□□□□□ -1.02
VPS33A-203ENST00000536212 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
VPS33A-203ENST00000536212 PLA2G2EQ9NZK7 142 aa8.69□□□□□ -1.02
VPS33A-203ENST00000536212 SYNJ1O43426 1573 aa8.69□□□□□ -1.02
VPS33A-203ENST00000536212 STK25O00506 426 aa8.68□□□□□ -1.02
VPS33A-203ENST00000536212 TPRNQ4KMQ1 711 aa8.68□□□□□ -1.02
VPS33A-203ENST00000536212 KHSRPQ92945 711 aaKnown RBP eCLIP8.68□□□□□ -1.02
VPS33A-203ENST00000536212 BAZ1BQ9UIG0 1483 aaKnown RBP8.68□□□□□ -1.02
VPS33A-203ENST00000536212 UBTFP17480 764 aaKnown RBP8.67□□□□□ -1.02
VPS33A-203ENST00000536212 HCSTQ9UBK5 93 aa8.66□□□□□ -1.02
VPS33A-203ENST00000536212 PHF8Q9UPP1 1060 aa8.65□□□□□ -1.02
VPS33A-203ENST00000536212 NKX1-1Q15270 411 aaPredicted RBP8.64□□□□□ -1.03
VPS33A-203ENST00000536212 VPS8Q8N3P4 1428 aa8.63□□□□□ -1.03
VPS33A-203ENST00000536212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.63□□□□□ -1.03
VPS33A-203ENST00000536212 POTEEQ6S8J3 1075 aa8.63□□□□□ -1.03
VPS33A-203ENST00000536212 ZFP91Q96JP5 570 aaPredicted RBP8.63□□□□□ -1.03
VPS33A-203ENST00000536212 CLIP1P30622 1438 aa8.63□□□□□ -1.03
VPS33A-203ENST00000536212 BCL11BQ9C0K0 894 aaPredicted RBP8.62□□□□□ -1.03
VPS33A-203ENST00000536212 STK24Q9Y6E0 443 aa8.62□□□□□ -1.03
VPS33A-203ENST00000536212 TOP2BQ02880 1626 aa8.62□□□□□ -1.03
VPS33A-203ENST00000536212 GTPBP6O43824 516 aaPredicted RBP8.6□□□□□ -1.03
VPS33A-203ENST00000536212 NCAPD3P42695 1498 aa8.59□□□□□ -1.03
VPS33A-203ENST00000536212 RAPGEF2Q9Y4G8 1499 aa8.59□□□□□ -1.03
VPS33A-203ENST00000536212 BIVM-ERCC5R4GMW8 1640 aa8.59□□□□□ -1.03
VPS33A-203ENST00000536212 KIF3CO14782 793 aa8.59□□□□□ -1.03
VPS33A-203ENST00000536212 NUDT7P0C024 238 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms