RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 ZNF777Q9ULD5 760 aaPredicted RBP20.09■□□□□ 0.81
VPS37C-203ENST00000536000 CCNB3Q8WWL7 1395 aa20.08■□□□□ 0.81
VPS37C-203ENST00000536000 APLP2Q06481 763 aa20.08■□□□□ 0.81
VPS37C-203ENST00000536000 CFDP1Q9UEE9 299 aaPredicted RBP20.07■□□□□ 0.8
VPS37C-203ENST00000536000 CDC42BPBQ9Y5S2 1711 aa20.05■□□□□ 0.8
VPS37C-203ENST00000536000 AFAP1Q8N556 730 aa20.05■□□□□ 0.8
VPS37C-203ENST00000536000 MYT1LQ9UL68 1186 aa20.05■□□□□ 0.8
VPS37C-203ENST00000536000 GPATCH8Q9UKJ3 1502 aaKnown RBP20.04■□□□□ 0.8
VPS37C-203ENST00000536000 EHBP1L1Q8N3D4 1523 aa20.03■□□□□ 0.8
VPS37C-203ENST00000536000 FRMPD1Q5SYB0 1578 aa20.03■□□□□ 0.8
VPS37C-203ENST00000536000 ARID4BQ4LE39 1312 aaPredicted RBP20.02■□□□□ 0.8
VPS37C-203ENST00000536000 RICTORQ6R327 1708 aa20.02■□□□□ 0.8
VPS37C-203ENST00000536000 PREX2Q70Z35 1606 aa20.02■□□□□ 0.79
VPS37C-203ENST00000536000 POGZQ7Z3K3 1410 aa20.02■□□□□ 0.79
VPS37C-203ENST00000536000 CDC42BPAQ5VT25 1732 aa20.01■□□□□ 0.79
VPS37C-203ENST00000536000 TIAM1Q13009 1591 aa20■□□□□ 0.79
VPS37C-203ENST00000536000 KANK4Q5T7N3 995 aaPredicted RBP20■□□□□ 0.79
VPS37C-203ENST00000536000 MAGI2Q86UL8 1455 aa19.99■□□□□ 0.79
VPS37C-203ENST00000536000 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.794e-7■■■■□ 24.4
VPS37C-203ENST00000536000 ZNF518AQ6AHZ1 1483 aa19.98■□□□□ 0.79
VPS37C-203ENST00000536000 MAP3K1Q13233 1512 aa19.97■□□□□ 0.79
VPS37C-203ENST00000536000 LRRC9Q6ZRR7 1453 aa19.97■□□□□ 0.79
VPS37C-203ENST00000536000 YEATS2Q9ULM3 1422 aa19.96■□□□□ 0.79
VPS37C-203ENST00000536000 ZMYM4Q5VZL5 1548 aa19.96■□□□□ 0.79
VPS37C-203ENST00000536000 TRAPPC8Q9Y2L5 1435 aa19.95■□□□□ 0.78
VPS37C-203ENST00000536000 NCOA2Q15596 1464 aa19.95■□□□□ 0.78
VPS37C-203ENST00000536000 ARHGEF12Q9NZN5 1544 aa19.95■□□□□ 0.78
VPS37C-203ENST00000536000 ZFYVE16Q7Z3T8 1539 aa19.94■□□□□ 0.78
VPS37C-203ENST00000536000 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
VPS37C-203ENST00000536000 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
VPS37C-203ENST00000536000 PLEKHH2Q8IVE3 1493 aa19.92■□□□□ 0.78
VPS37C-203ENST00000536000 ABCC1P33527 1531 aa19.92■□□□□ 0.78
VPS37C-203ENST00000536000 KIAA1107Q9UPP5 1409 aa19.92■□□□□ 0.78
VPS37C-203ENST00000536000 ATP10AO60312 1499 aa19.91■□□□□ 0.78
VPS37C-203ENST00000536000 ARHGEF40Q8TER5 1519 aa19.91■□□□□ 0.78
VPS37C-203ENST00000536000 SAMD9LQ8IVG5 1584 aa19.91■□□□□ 0.78
VPS37C-203ENST00000536000 SPAG9O60271 1321 aaKnown RBP19.9■□□□□ 0.78
VPS37C-203ENST00000536000 ITSN2Q9NZM3 1697 aa19.88■□□□□ 0.77
VPS37C-203ENST00000536000 KDM5CP41229 1560 aa19.88■□□□□ 0.77
VPS37C-203ENST00000536000 MLH3Q9UHC1 1453 aa19.88■□□□□ 0.77
VPS37C-203ENST00000536000 MLECQ14165 292 aa19.88■□□□□ 0.77
VPS37C-203ENST00000536000 SYCP2Q9BX26 1530 aa19.86■□□□□ 0.77
VPS37C-203ENST00000536000 RSPH4AQ5TD94 716 aa19.86■□□□□ 0.77
VPS37C-203ENST00000536000 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
VPS37C-203ENST00000536000 HECW2Q9P2P5 1572 aa19.84■□□□□ 0.77
VPS37C-203ENST00000536000 BCORL1Q5H9F3 1711 aa19.81■□□□□ 0.76
VPS37C-203ENST00000536000 MBD5Q9P267 1494 aa19.8■□□□□ 0.76
VPS37C-203ENST00000536000 TSPY4P0CV99 314 aa19.8■□□□□ 0.76
VPS37C-203ENST00000536000 TSPY10P0CW01 314 aa19.8■□□□□ 0.76
VPS37C-203ENST00000536000 MYOM3Q5VTT5 1437 aa19.79■□□□□ 0.76
VPS37C-203ENST00000536000 ADAMTSL3P82987 1691 aa19.79■□□□□ 0.76
VPS37C-203ENST00000536000 CAMSAP2Q08AD1 1489 aa19.79■□□□□ 0.76
VPS37C-203ENST00000536000 MIA2Q96PC5 1412 aa19.78■□□□□ 0.76
VPS37C-203ENST00000536000 KIDINS220Q9ULH0 1771 aa19.78■□□□□ 0.76
VPS37C-203ENST00000536000 DIP2CQ9Y2E4 1556 aa19.78■□□□□ 0.76
VPS37C-203ENST00000536000 ABCA6Q8N139 1617 aa19.76■□□□□ 0.75
VPS37C-203ENST00000536000 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
VPS37C-203ENST00000536000 SIGLEC1Q9BZZ2 1709 aa19.75■□□□□ 0.75
VPS37C-203ENST00000536000 PTPRMP28827 1452 aa19.74■□□□□ 0.75
VPS37C-203ENST00000536000 ESF1Q9H501 851 aaKnown RBP19.74■□□□□ 0.75
VPS37C-203ENST00000536000 ATP7AQ04656 1500 aa19.74■□□□□ 0.75
VPS37C-203ENST00000536000 RTEL1-TNFRSF6BF6WH68 1400 aa19.74■□□□□ 0.75
VPS37C-203ENST00000536000 CCDC141Q6ZP82 1450 aa19.73■□□□□ 0.75
VPS37C-203ENST00000536000 MADDQ8WXG6 1647 aa19.73■□□□□ 0.75
VPS37C-203ENST00000536000 REREQ9P2R6 1566 aa19.72■□□□□ 0.75
VPS37C-203ENST00000536000 AGLP35573 1532 aa19.71■□□□□ 0.75
VPS37C-203ENST00000536000 A2MP01023 1474 aa19.69■□□□□ 0.74
VPS37C-203ENST00000536000 PPARGC1BQ86YN6 1023 aaKnown RBP19.68■□□□□ 0.74
VPS37C-203ENST00000536000 ARHGEF5Q12774 1597 aa19.68■□□□□ 0.74
VPS37C-203ENST00000536000 INO80Q9ULG1 1556 aaPredicted RBP19.68■□□□□ 0.74
VPS37C-203ENST00000536000 RIMS1Q86UR5 1692 aaKnown RBP19.68■□□□□ 0.74
VPS37C-203ENST00000536000 GGT6Q6P531 493 aa19.67■□□□□ 0.74
VPS37C-203ENST00000536000 DHX29Q7Z478 1369 aaKnown RBP19.67■□□□□ 0.74
VPS37C-203ENST00000536000 FGD6Q6ZV73 1430 aa19.66■□□□□ 0.74
VPS37C-203ENST00000536000 CEBPAP49715 358 aaPredicted RBP19.65■□□□□ 0.74
VPS37C-203ENST00000536000 KIF3BO15066 747 aa19.64■□□□□ 0.73
VPS37C-203ENST00000536000 FAM50AQ14320 339 aaKnown RBP19.64■□□□□ 0.73
VPS37C-203ENST00000536000 FER1L4A9Z1Z3 1794 aa19.63■□□□□ 0.73
VPS37C-203ENST00000536000 PTPN23Q9H3S7 1636 aa19.63■□□□□ 0.73
VPS37C-203ENST00000536000 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
VPS37C-203ENST00000536000 ADGBQ8N7X0 1667 aa19.62■□□□□ 0.73
VPS37C-203ENST00000536000 TCOF1Q13428 1488 aaKnown RBP19.6■□□□□ 0.73
VPS37C-203ENST00000536000 ABCC5O15440 1437 aa19.59■□□□□ 0.73
VPS37C-203ENST00000536000 CHIC2Q9UKJ5 165 aa19.58■□□□□ 0.72
VPS37C-203ENST00000536000 CNTLNQ9NXG0 1405 aa19.58■□□□□ 0.72
VPS37C-203ENST00000536000 PLXNC1O60486 1568 aa19.57■□□□□ 0.72
VPS37C-203ENST00000536000 RRP7BPQ9NSQ0 103 aa19.57■□□□□ 0.72
VPS37C-203ENST00000536000 MAST1Q9Y2H9 1570 aa19.57■□□□□ 0.72
VPS37C-203ENST00000536000 DAPK1P53355 1430 aa19.56■□□□□ 0.72
VPS37C-203ENST00000536000 ZMYM3Q14202 1370 aa19.55■□□□□ 0.72
VPS37C-203ENST00000536000 SETD1BQ9UPS6 1966 aaKnown RBP19.53■□□□□ 0.72
VPS37C-203ENST00000536000 WASHC2CQ9Y4E1 1318 aa19.51■□□□□ 0.71
VPS37C-203ENST00000536000 ANKRD30AQ9BXX3 1397 aa19.51■□□□□ 0.71
VPS37C-203ENST00000536000 SHANK2Q9UPX8 1470 aa19.51■□□□□ 0.71
VPS37C-203ENST00000536000 DNMT1P26358 1616 aaKnown RBP19.51■□□□□ 0.71
VPS37C-203ENST00000536000 KIF15Q9NS87 1388 aa19.5■□□□□ 0.71
VPS37C-203ENST00000536000 HSPA2P54652 639 aa19.48■□□□□ 0.71
VPS37C-203ENST00000536000 DUOX2Q9NRD8 1548 aa19.47■□□□□ 0.71
VPS37C-203ENST00000536000 C3P01024 1663 aa19.46■□□□□ 0.71
VPS37C-203ENST00000536000 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms