RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 LRRIQ1Q96JM4 1722 aa17.01■□□□□ 0.31
UBE3B-205ENST00000535900 POGZQ7Z3K3 1410 aa16.99■□□□□ 0.31
UBE3B-205ENST00000535900 PLCH2O75038 1416 aa16.98■□□□□ 0.31
UBE3B-205ENST00000535900 CDK11AQ9UQ88 783 aaPredicted RBP16.98■□□□□ 0.31
UBE3B-205ENST00000535900 TROQ12816 1431 aaPredicted RBP16.97■□□□□ 0.31
UBE3B-205ENST00000535900 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
UBE3B-205ENST00000535900 MAGI2Q86UL8 1455 aa16.97■□□□□ 0.31
UBE3B-205ENST00000535900 SCAPERQ9BY12 1400 aa16.96■□□□□ 0.31
UBE3B-205ENST00000535900 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.31
UBE3B-205ENST00000535900 ARHGAP5Q13017 1502 aa16.96■□□□□ 0.31
UBE3B-205ENST00000535900 CCDC18Q5T9S5 1454 aa16.95■□□□□ 0.3
UBE3B-205ENST00000535900 ILDR1Q86SU0 546 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-205ENST00000535900 SIGLEC1Q9BZZ2 1709 aa16.95■□□□□ 0.3
UBE3B-205ENST00000535900 FER1L4A9Z1Z3 1794 aa16.94■□□□□ 0.3
UBE3B-205ENST00000535900 PREX2Q70Z35 1606 aa16.92■□□□□ 0.3
UBE3B-205ENST00000535900 CASKIN1Q8WXD9 1431 aa16.91■□□□□ 0.3
UBE3B-205ENST00000535900 ZNF518AQ6AHZ1 1483 aa16.91■□□□□ 0.3
UBE3B-205ENST00000535900 EFCAB2Q5VUJ9 269 aa16.9■□□□□ 0.3
UBE3B-205ENST00000535900 C9orf84Q5VXU9 1444 aa16.89■□□□□ 0.29
UBE3B-205ENST00000535900 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.29
UBE3B-205ENST00000535900 CDC42BPBQ9Y5S2 1711 aa16.89■□□□□ 0.29
UBE3B-205ENST00000535900 KDM5CP41229 1560 aa16.89■□□□□ 0.29
UBE3B-205ENST00000535900 LMTK3Q96Q04 1460 aa16.87■□□□□ 0.29
UBE3B-205ENST00000535900 ABCC1P33527 1531 aa16.86■□□□□ 0.29
UBE3B-205ENST00000535900 ITSN2Q9NZM3 1697 aa16.86■□□□□ 0.29
UBE3B-205ENST00000535900 ATP10AO60312 1499 aa16.86■□□□□ 0.29
UBE3B-205ENST00000535900 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
UBE3B-205ENST00000535900 MLECQ14165 292 aa16.84■□□□□ 0.29
UBE3B-205ENST00000535900 ARHGEF12Q9NZN5 1544 aa16.84■□□□□ 0.29
UBE3B-205ENST00000535900 DIP2CQ9Y2E4 1556 aa16.84■□□□□ 0.29
UBE3B-205ENST00000535900 CDC42BPAQ5VT25 1732 aa16.84■□□□□ 0.29
UBE3B-205ENST00000535900 ABCA6Q8N139 1617 aa16.83■□□□□ 0.28
UBE3B-205ENST00000535900 APLP2Q06481 763 aa16.82■□□□□ 0.28
UBE3B-205ENST00000535900 MYT1LQ9UL68 1186 aa16.82■□□□□ 0.28
UBE3B-205ENST00000535900 MAP3K1Q13233 1512 aa16.81■□□□□ 0.28
UBE3B-205ENST00000535900 REREQ9P2R6 1566 aa16.8■□□□□ 0.28
UBE3B-205ENST00000535900 PREX1Q8TCU6 1659 aa16.78■□□□□ 0.28
UBE3B-205ENST00000535900 MLH3Q9UHC1 1453 aa16.77■□□□□ 0.28
UBE3B-205ENST00000535900 AFAP1Q8N556 730 aa16.76■□□□□ 0.27
UBE3B-205ENST00000535900 TRAPPC8Q9Y2L5 1435 aa16.76■□□□□ 0.27
UBE3B-205ENST00000535900 SAMD9LQ8IVG5 1584 aa16.76■□□□□ 0.27
UBE3B-205ENST00000535900 SYCP2Q9BX26 1530 aa16.75■□□□□ 0.27
UBE3B-205ENST00000535900 KIDINS220Q9ULH0 1771 aa16.74■□□□□ 0.27
UBE3B-205ENST00000535900 HSPA2P54652 639 aa16.73■□□□□ 0.27
UBE3B-205ENST00000535900 AGLP35573 1532 aa16.71■□□□□ 0.27
UBE3B-205ENST00000535900 MTUS2Q5JR59 1369 aa16.71■□□□□ 0.27
UBE3B-205ENST00000535900 EHBP1L1Q8N3D4 1523 aa16.7■□□□□ 0.26
UBE3B-205ENST00000535900 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
UBE3B-205ENST00000535900 ZNF777Q9ULD5 760 aaPredicted RBP16.7■□□□□ 0.26
UBE3B-205ENST00000535900 GPATCH8Q9UKJ3 1502 aaKnown RBP16.7■□□□□ 0.26
UBE3B-205ENST00000535900 C3P01024 1663 aa16.69■□□□□ 0.26
UBE3B-205ENST00000535900 FBXO41Q8TF61 875 aa16.69■□□□□ 0.26
UBE3B-205ENST00000535900 PLEKHH2Q8IVE3 1493 aa16.68■□□□□ 0.26
UBE3B-205ENST00000535900 CCNB3Q8WWL7 1395 aa16.68■□□□□ 0.26
UBE3B-205ENST00000535900 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
UBE3B-205ENST00000535900 ATP7AQ04656 1500 aa16.67■□□□□ 0.26
UBE3B-205ENST00000535900 UHRF1BP1Q6BDS2 1440 aa16.67■□□□□ 0.26
UBE3B-205ENST00000535900 ESF1Q9H501 851 aaKnown RBP16.66■□□□□ 0.26
UBE3B-205ENST00000535900 SUPT6HQ7KZ85 1726 aaKnown RBP16.65■□□□□ 0.26
UBE3B-205ENST00000535900 CEBPAP49715 358 aaPredicted RBP16.65■□□□□ 0.26
UBE3B-205ENST00000535900 LRRC9Q6ZRR7 1453 aa16.64■□□□□ 0.25
UBE3B-205ENST00000535900 CNTLNQ9NXG0 1405 aa16.63■□□□□ 0.25
UBE3B-205ENST00000535900 CFDP1Q9UEE9 299 aaPredicted RBP16.63■□□□□ 0.25
UBE3B-205ENST00000535900 SPAG9O60271 1321 aaKnown RBP16.63■□□□□ 0.25
UBE3B-205ENST00000535900 MROH2AA6NES4 1674 aa16.62■□□□□ 0.25
UBE3B-205ENST00000535900 PLXNC1O60486 1568 aa16.62■□□□□ 0.25
UBE3B-205ENST00000535900 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
UBE3B-205ENST00000535900 ADGBQ8N7X0 1667 aa16.6■□□□□ 0.25
UBE3B-205ENST00000535900 HNRNPMP52272 730 aaKnown RBP eCLIP16.6■□□□□ 0.25
UBE3B-205ENST00000535900 CLTCQ00610 1675 aaKnown RBP16.59■□□□□ 0.25
UBE3B-205ENST00000535900 KANK4Q5T7N3 995 aaPredicted RBP16.58■□□□□ 0.24
UBE3B-205ENST00000535900 A2MP01023 1474 aa16.58■□□□□ 0.24
UBE3B-205ENST00000535900 STRCQ7RTU9 1775 aa16.58■□□□□ 0.24
UBE3B-205ENST00000535900 SETD1BQ9UPS6 1966 aaKnown RBP16.57■□□□□ 0.24
UBE3B-205ENST00000535900 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
UBE3B-205ENST00000535900 MYO3AQ8NEV4 1616 aa16.53■□□□□ 0.24
UBE3B-205ENST00000535900 CAMSAP2Q08AD1 1489 aa16.53■□□□□ 0.24
UBE3B-205ENST00000535900 NPATQ14207 1427 aa16.53■□□□□ 0.24
UBE3B-205ENST00000535900 CCDC141Q6ZP82 1450 aa16.52■□□□□ 0.23
UBE3B-205ENST00000535900 ZNF142P52746 1687 aaPredicted RBP16.52■□□□□ 0.23
UBE3B-205ENST00000535900 MBD5Q9P267 1494 aa16.51■□□□□ 0.23
UBE3B-205ENST00000535900 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
UBE3B-205ENST00000535900 ZNF644Q9H582 1327 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-205ENST00000535900 CERKQ8TCT0 537 aa16.5■□□□□ 0.23
UBE3B-205ENST00000535900 RTEL1-TNFRSF6BF6WH68 1400 aa16.49■□□□□ 0.23
UBE3B-205ENST00000535900 CAMSAP1Q5T5Y3 1602 aa16.48■□□□□ 0.23
UBE3B-205ENST00000535900 NCOA1Q15788 1441 aa16.48■□□□□ 0.23
UBE3B-205ENST00000535900 PPARGC1BQ86YN6 1023 aaKnown RBP16.48■□□□□ 0.23
UBE3B-205ENST00000535900 ZMYM3Q14202 1370 aa16.48■□□□□ 0.23
UBE3B-205ENST00000535900 CEP170BQ9Y4F5 1589 aaPredicted RBP16.47■□□□□ 0.23
UBE3B-205ENST00000535900 PTPRTO14522 1441 aa16.47■□□□□ 0.23
UBE3B-205ENST00000535900 GGT6Q6P531 493 aa16.47■□□□□ 0.23
UBE3B-205ENST00000535900 ARHGEF5Q12774 1597 aa16.46■□□□□ 0.23
UBE3B-205ENST00000535900 TRIM26Q12899 539 aaPredicted RBP16.45■□□□□ 0.22
UBE3B-205ENST00000535900 KDM5DQ9BY66 1539 aa16.44■□□□□ 0.22
UBE3B-205ENST00000535900 PTPRKQ15262 1439 aa16.44■□□□□ 0.22
UBE3B-205ENST00000535900 FAM135AQ9P2D6 1515 aa16.43■□□□□ 0.22
UBE3B-205ENST00000535900 MYOM3Q5VTT5 1437 aa16.43■□□□□ 0.22
UBE3B-205ENST00000535900 DHX29Q7Z478 1369 aaKnown RBP16.42■□□□□ 0.22
UBE3B-205ENST00000535900 MIA2Q96PC5 1412 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms