RNA–Protein interactions for RNA: ENST00000535021.5

LPCAT3-202, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-202ENST00000535021 PREX2Q70Z35 1606 aa13.57□□□□□ -0.24
LPCAT3-202ENST00000535021 ABCA9Q8IUA7 1624 aa13.57□□□□□ -0.24
LPCAT3-202ENST00000535021 TCOF1Q13428 1488 aaKnown RBP13.57□□□□□ -0.24
LPCAT3-202ENST00000535021 PCGF6Q9BYE7 350 aa13.57□□□□□ -0.24
LPCAT3-202ENST00000535021 PTPN23Q9H3S7 1636 aa13.57□□□□□ -0.24
LPCAT3-202ENST00000535021 MYO5CQ9NQX4 1742 aa13.56□□□□□ -0.24
LPCAT3-202ENST00000535021 KCNH8Q96L42 1107 aa13.55□□□□□ -0.24
LPCAT3-202ENST00000535021 CDC42BPBQ9Y5S2 1711 aa13.55□□□□□ -0.24
LPCAT3-202ENST00000535021 ARAP3Q8WWN8 1544 aa13.54□□□□□ -0.24
LPCAT3-202ENST00000535021 GLI2P10070 1586 aa13.51□□□□□ -0.25
LPCAT3-202ENST00000535021 PLCH2O75038 1416 aa13.51□□□□□ -0.25
LPCAT3-202ENST00000535021 CFDP1Q9UEE9 299 aaPredicted RBP13.51□□□□□ -0.25
LPCAT3-202ENST00000535021 DIP2BQ9P265 1576 aa13.5□□□□□ -0.25
LPCAT3-202ENST00000535021 CAMSAP2Q08AD1 1489 aa13.5□□□□□ -0.25
LPCAT3-202ENST00000535021 MAPK8IP2Q13387 824 aaPredicted RBP13.5□□□□□ -0.25
LPCAT3-202ENST00000535021 FAM50AQ14320 339 aaKnown RBP13.5□□□□□ -0.25
LPCAT3-202ENST00000535021 ARHGAP5Q13017 1502 aa13.49□□□□□ -0.25
LPCAT3-202ENST00000535021 SAMD9LQ8IVG5 1584 aa13.49□□□□□ -0.25
LPCAT3-202ENST00000535021 MAP3K4Q9Y6R4 1608 aa13.47□□□□□ -0.25
LPCAT3-202ENST00000535021 DNMT1P26358 1616 aaKnown RBP13.46□□□□□ -0.25
LPCAT3-202ENST00000535021 ZNF644Q9H582 1327 aaPredicted RBP13.46□□□□□ -0.25
LPCAT3-202ENST00000535021 PLEKHH2Q8IVE3 1493 aa13.45□□□□□ -0.26
LPCAT3-202ENST00000535021 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
LPCAT3-202ENST00000535021 CD109Q6YHK3 1445 aa13.45□□□□□ -0.26
LPCAT3-202ENST00000535021 ARHGEF5Q12774 1597 aa13.45□□□□□ -0.26
LPCAT3-202ENST00000535021 KIF13AQ9H1H9 1805 aa13.44□□□□□ -0.26
LPCAT3-202ENST00000535021 EFCAB2Q5VUJ9 269 aa13.44□□□□□ -0.26
LPCAT3-202ENST00000535021 ABCC1P33527 1531 aa13.44□□□□□ -0.26
LPCAT3-202ENST00000535021 CROCC2H7BZ55 1655 aa13.44□□□□□ -0.26
LPCAT3-202ENST00000535021 FANCAO15360 1455 aa13.43□□□□□ -0.26
LPCAT3-202ENST00000535021 DAPK1P53355 1430 aa13.43□□□□□ -0.26
LPCAT3-202ENST00000535021 PTPRKQ15262 1439 aa13.43□□□□□ -0.26
LPCAT3-202ENST00000535021 CFAP74Q9C0B2 1584 aa13.43□□□□□ -0.26
LPCAT3-202ENST00000535021 ZNF777Q9ULD5 760 aaPredicted RBP13.43□□□□□ -0.26
LPCAT3-202ENST00000535021 KIAA1107Q9UPP5 1409 aa13.43□□□□□ -0.26
LPCAT3-202ENST00000535021 MBD5Q9P267 1494 aa13.42□□□□□ -0.26
LPCAT3-202ENST00000535021 ABCC5O15440 1437 aa13.42□□□□□ -0.26
LPCAT3-202ENST00000535021 SYCP2Q9BX26 1530 aa13.42□□□□□ -0.26
LPCAT3-202ENST00000535021 SHANK2Q9UPX8 1470 aa13.41□□□□□ -0.26
LPCAT3-202ENST00000535021 ITGAEP38570 1179 aa13.4□□□□□ -0.26
LPCAT3-202ENST00000535021 CCDC141Q6ZP82 1450 aa13.4□□□□□ -0.26
LPCAT3-202ENST00000535021 NEO1Q92859 1461 aa13.4□□□□□ -0.26
LPCAT3-202ENST00000535021 ARHGEF12Q9NZN5 1544 aa13.39□□□□□ -0.27
LPCAT3-202ENST00000535021 FAM69CQ0P6D2 419 aa13.39□□□□□ -0.27
LPCAT3-202ENST00000535021 PPRC1Q5VV67 1664 aaKnown RBP13.39□□□□□ -0.27
LPCAT3-202ENST00000535021 AKNAQ7Z591 1439 aa13.39□□□□□ -0.27
LPCAT3-202ENST00000535021 ADGBQ8N7X0 1667 aa13.38□□□□□ -0.27
LPCAT3-202ENST00000535021 ADGRL1O94910 1474 aa13.38□□□□□ -0.27
LPCAT3-202ENST00000535021 RSPH4AQ5TD94 716 aa13.38□□□□□ -0.27
LPCAT3-202ENST00000535021 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
LPCAT3-202ENST00000535021 MAST1Q9Y2H9 1570 aa13.37□□□□□ -0.27
LPCAT3-202ENST00000535021 ADGRL2O95490 1459 aa13.36□□□□□ -0.27
LPCAT3-202ENST00000535021 ROCK1Q13464 1354 aa13.36□□□□□ -0.27
LPCAT3-202ENST00000535021 HNRNPMP52272 730 aaKnown RBP eCLIP13.36□□□□□ -0.27
LPCAT3-202ENST00000535021 GCC2Q8IWJ2 1684 aa13.36□□□□□ -0.27
LPCAT3-202ENST00000535021 HFM1A2PYH4 1435 aa13.36□□□□□ -0.27
LPCAT3-202ENST00000535021 PPP4R3CPQ6ZMV5 832 aa13.35□□□□□ -0.27
LPCAT3-202ENST00000535021 C9orf84Q5VXU9 1444 aa13.35□□□□□ -0.27
LPCAT3-202ENST00000535021 TEX14Q8IWB6 1497 aa13.35□□□□□ -0.27
LPCAT3-202ENST00000535021 TSPOAP1O95153 1857 aa13.34□□□□□ -0.27
LPCAT3-202ENST00000535021 SCAPERQ9BY12 1400 aa13.34□□□□□ -0.27
LPCAT3-202ENST00000535021 TRAPPC8Q9Y2L5 1435 aa13.34□□□□□ -0.27
LPCAT3-202ENST00000535021 NAIPQ13075 1403 aa13.33□□□□□ -0.28
LPCAT3-202ENST00000535021 SETD5Q9C0A6 1442 aa13.33□□□□□ -0.28
LPCAT3-202ENST00000535021 CHIC2Q9UKJ5 165 aa13.32□□□□□ -0.28
LPCAT3-202ENST00000535021 NCOA1Q15788 1441 aa13.31□□□□□ -0.28
LPCAT3-202ENST00000535021 POGZQ7Z3K3 1410 aa13.31□□□□□ -0.28
LPCAT3-202ENST00000535021 TSPY4P0CV99 314 aa13.31□□□□□ -0.28
LPCAT3-202ENST00000535021 TSPY10P0CW01 314 aa13.31□□□□□ -0.28
LPCAT3-202ENST00000535021 PLXNC1O60486 1568 aa13.31□□□□□ -0.28
LPCAT3-202ENST00000535021 KDM5CP41229 1560 aa13.31□□□□□ -0.28
LPCAT3-202ENST00000535021 ANKRD30AQ9BXX3 1397 aa13.31□□□□□ -0.28
LPCAT3-202ENST00000535021 ZNF518AQ6AHZ1 1483 aa13.3□□□□□ -0.28
LPCAT3-202ENST00000535021 ZFYVE16Q7Z3T8 1539 aa13.3□□□□□ -0.28
LPCAT3-202ENST00000535021 INO80Q9ULG1 1556 aaPredicted RBP13.3□□□□□ -0.28
LPCAT3-202ENST00000535021 RAB3GAP2Q9H2M9 1393 aa13.3□□□□□ -0.28
LPCAT3-202ENST00000535021 RTEL1-TNFRSF6BF6WH68 1400 aa13.3□□□□□ -0.28
LPCAT3-202ENST00000535021 RICTORQ6R327 1708 aa13.29□□□□□ -0.28
LPCAT3-202ENST00000535021 DENND4BO75064 1496 aaPredicted RBP13.29□□□□□ -0.28
LPCAT3-202ENST00000535021 HRCP23327 699 aa13.28□□□□□ -0.28
LPCAT3-202ENST00000535021 RRP7BPQ9NSQ0 103 aa13.28□□□□□ -0.28
LPCAT3-202ENST00000535021 AFAP1Q8N556 730 aa13.27□□□□□ -0.29
LPCAT3-202ENST00000535021 ATP7AQ04656 1500 aa13.27□□□□□ -0.29
LPCAT3-202ENST00000535021 FRMPD1Q5SYB0 1578 aa13.27□□□□□ -0.29
LPCAT3-202ENST00000535021 KDM6BO15054 1643 aa13.26□□□□□ -0.29
LPCAT3-202ENST00000535021 SPAG9O60271 1321 aaKnown RBP13.26□□□□□ -0.29
LPCAT3-202ENST00000535021 KIDINS220Q9ULH0 1771 aa13.25□□□□□ -0.29
LPCAT3-202ENST00000535021 HECW2Q9P2P5 1572 aa13.25□□□□□ -0.29
LPCAT3-202ENST00000535021 MLH3Q9UHC1 1453 aa13.25□□□□□ -0.29
LPCAT3-202ENST00000535021 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
LPCAT3-202ENST00000535021 ZMYM4Q5VZL5 1548 aa13.24□□□□□ -0.29
LPCAT3-202ENST00000535021 DUOX2Q9NRD8 1548 aa13.23□□□□□ -0.29
LPCAT3-202ENST00000535021 ANKRD50Q9ULJ7 1429 aa13.23□□□□□ -0.29
LPCAT3-202ENST00000535021 RAPGEF3O95398 923 aa13.21□□□□□ -0.29
LPCAT3-202ENST00000535021 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
LPCAT3-202ENST00000535021 COL17A1Q9UMD9 1497 aaPredicted RBP13.21□□□□□ -0.3
LPCAT3-202ENST00000535021 ERBINQ96RT1 1412 aa13.21□□□□□ -0.3
LPCAT3-202ENST00000535021 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
LPCAT3-202ENST00000535021 ABCA6Q8N139 1617 aa13.2□□□□□ -0.3
LPCAT3-202ENST00000535021 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms