RNA–Protein interactions for RNA: ENST00000534903.1

NPIPB3-206, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-206ENST00000534903 MAGI3Q5TCQ9 1506 aa8.33□□□□□ -1.08
NPIPB3-206ENST00000534903 DISP3Q9P2K9 1392 aa8.33□□□□□ -1.08
NPIPB3-206ENST00000534903 PTPRMP28827 1452 aa8.32□□□□□ -1.08
NPIPB3-206ENST00000534903 TTBK1Q5TCY1 1321 aaPredicted RBP8.32□□□□□ -1.08
NPIPB3-206ENST00000534903 P3H3Q8IVL6 736 aa8.32□□□□□ -1.08
NPIPB3-206ENST00000534903 CERKQ8TCT0 537 aa8.32□□□□□ -1.08
NPIPB3-206ENST00000534903 KANK4Q5T7N3 995 aaPredicted RBP8.31□□□□□ -1.08
NPIPB3-206ENST00000534903 RAPGEF6Q8TEU7 1601 aa8.31□□□□□ -1.08
NPIPB3-206ENST00000534903 CD109Q6YHK3 1445 aa8.3□□□□□ -1.08
NPIPB3-206ENST00000534903 WDR7Q9Y4E6 1490 aa8.3□□□□□ -1.08
NPIPB3-206ENST00000534903 SUPT6HQ7KZ85 1726 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-206ENST00000534903 CCNB3Q8WWL7 1395 aa8.29□□□□□ -1.08
NPIPB3-206ENST00000534903 PHLDB1Q86UU1 1377 aa8.28□□□□□ -1.08
NPIPB3-206ENST00000534903 ZEB1P37275 1124 aaPredicted RBP8.28□□□□□ -1.08
NPIPB3-206ENST00000534903 ARAP3Q8WWN8 1544 aa8.28□□□□□ -1.08
NPIPB3-206ENST00000534903 MTUS2Q5JR59 1369 aa8.27□□□□□ -1.09
NPIPB3-206ENST00000534903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.26□□□□□ -1.09
NPIPB3-206ENST00000534903 ABCA8O94911 1581 aa8.26□□□□□ -1.09
NPIPB3-206ENST00000534903 NUP153P49790 1475 aaKnown RBP8.26□□□□□ -1.09
NPIPB3-206ENST00000534903 CDK13Q14004 1512 aaKnown RBP8.25□□□□□ -1.09
NPIPB3-206ENST00000534903 ADAMTSL3P82987 1691 aa8.25□□□□□ -1.09
NPIPB3-206ENST00000534903 NCOA2Q15596 1464 aa8.25□□□□□ -1.09
NPIPB3-206ENST00000534903 ATP1B4Q9UN42 357 aaPredicted RBP8.24□□□□□ -1.09
NPIPB3-206ENST00000534903 ZCCHC11Q5TAX3 1644 aaKnown RBP8.24□□□□□ -1.09
NPIPB3-206ENST00000534903 FGD6Q6ZV73 1430 aa8.23□□□□□ -1.09
NPIPB3-206ENST00000534903 KCNH8Q96L42 1107 aa8.23□□□□□ -1.09
NPIPB3-206ENST00000534903 MYOM3Q5VTT5 1437 aa8.22□□□□□ -1.09
NPIPB3-206ENST00000534903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.22□□□□□ -1.09
NPIPB3-206ENST00000534903 HSPA2P54652 639 aa8.21□□□□□ -1.1
NPIPB3-206ENST00000534903 ARID4BQ4LE39 1312 aaPredicted RBP8.21□□□□□ -1.1
NPIPB3-206ENST00000534903 TCOF1Q13428 1488 aaKnown RBP8.2□□□□□ -1.1
NPIPB3-206ENST00000534903 PTPN23Q9H3S7 1636 aa8.2□□□□□ -1.1
NPIPB3-206ENST00000534903 ITSN2Q9NZM3 1697 aa8.2□□□□□ -1.1
NPIPB3-206ENST00000534903 TROQ12816 1431 aaPredicted RBP8.2□□□□□ -1.1
NPIPB3-206ENST00000534903 HNRNPUL2Q1KMD3 747 aaKnown RBP8.19□□□□□ -1.1
NPIPB3-206ENST00000534903 MIA2Q96PC5 1412 aa8.19□□□□□ -1.1
NPIPB3-206ENST00000534903 RAPGEF3O95398 923 aa8.18□□□□□ -1.1
NPIPB3-206ENST00000534903 CCER1Q8TC90 406 aaPredicted RBP8.18□□□□□ -1.1
NPIPB3-206ENST00000534903 CDK11AQ9UQ88 783 aaPredicted RBP8.18□□□□□ -1.1
NPIPB3-206ENST00000534903 KIF14Q15058 1648 aa8.18□□□□□ -1.1
NPIPB3-206ENST00000534903 BCORL1Q5H9F3 1711 aa8.17□□□□□ -1.1
NPIPB3-206ENST00000534903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.17□□□□□ -1.1
NPIPB3-206ENST00000534903 NEO1Q92859 1461 aa8.17□□□□□ -1.1
NPIPB3-206ENST00000534903 SPATA31D1Q6ZQQ2 1576 aa8.17□□□□□ -1.1
NPIPB3-206ENST00000534903 POGZQ7Z3K3 1410 aa8.16□□□□□ -1.1
NPIPB3-206ENST00000534903 MADDQ8WXG6 1647 aa8.16□□□□□ -1.1
NPIPB3-206ENST00000534903 ATP10BO94823 1461 aa8.15□□□□□ -1.1
NPIPB3-206ENST00000534903 AKNAQ7Z591 1439 aa8.15□□□□□ -1.1
NPIPB3-206ENST00000534903 YEATS2Q9ULM3 1422 aa8.15□□□□□ -1.1
NPIPB3-206ENST00000534903 CLSPNQ9HAW4 1339 aa8.15□□□□□ -1.1
NPIPB3-206ENST00000534903 DSG3P32926 999 aa8.15□□□□□ -1.1
NPIPB3-206ENST00000534903 SETD5Q9C0A6 1442 aa8.14□□□□□ -1.11
NPIPB3-206ENST00000534903 FAM50AQ14320 339 aaKnown RBP8.14□□□□□ -1.11
NPIPB3-206ENST00000534903 GCC2Q8IWJ2 1684 aa8.14□□□□□ -1.11
NPIPB3-206ENST00000534903 DNMT1P26358 1616 aaKnown RBP8.13□□□□□ -1.11
NPIPB3-206ENST00000534903 HFM1A2PYH4 1435 aa8.12□□□□□ -1.11
NPIPB3-206ENST00000534903 DHX57Q6P158 1386 aaKnown RBP8.12□□□□□ -1.11
NPIPB3-206ENST00000534903 IQSEC2Q5JU85 1478 aa8.12□□□□□ -1.11
NPIPB3-206ENST00000534903 CDC42BPAQ5VT25 1732 aa8.12□□□□□ -1.11
NPIPB3-206ENST00000534903 CROCC2H7BZ55 1655 aa8.11□□□□□ -1.11
NPIPB3-206ENST00000534903 RAB3GAP2Q9H2M9 1393 aa8.11□□□□□ -1.11
NPIPB3-206ENST00000534903 FANCAO15360 1455 aa8.11□□□□□ -1.11
NPIPB3-206ENST00000534903 PREX2Q70Z35 1606 aa8.11□□□□□ -1.11
NPIPB3-206ENST00000534903 ABCA9Q8IUA7 1624 aa8.11□□□□□ -1.11
NPIPB3-206ENST00000534903 GPATCH8Q9UKJ3 1502 aaKnown RBP8.1□□□□□ -1.11
NPIPB3-206ENST00000534903 DENND4BO75064 1496 aaPredicted RBP8.1□□□□□ -1.11
NPIPB3-206ENST00000534903 CAMSAP2Q08AD1 1489 aa8.1□□□□□ -1.11
NPIPB3-206ENST00000534903 PTPRTO14522 1441 aa8.1□□□□□ -1.11
NPIPB3-206ENST00000534903 ARHGEF40Q8TER5 1519 aa8.09□□□□□ -1.11
NPIPB3-206ENST00000534903 RIMS1Q86UR5 1692 aaKnown RBP8.09□□□□□ -1.11
NPIPB3-206ENST00000534903 ADGBQ8N7X0 1667 aa8.09□□□□□ -1.11
NPIPB3-206ENST00000534903 ARID3CA6NKF2 412 aa8.09□□□□□ -1.11
NPIPB3-206ENST00000534903 ITGAEP38570 1179 aa8.09□□□□□ -1.11
NPIPB3-206ENST00000534903 SPINK5Q9NQ38 1064 aaPredicted RBP8.09□□□□□ -1.11
NPIPB3-206ENST00000534903 DAPK1P53355 1430 aa8.09□□□□□ -1.11
NPIPB3-206ENST00000534903 PTPRKQ15262 1439 aa8.09□□□□□ -1.11
NPIPB3-206ENST00000534903 FRMPD1Q5SYB0 1578 aa8.09□□□□□ -1.11
NPIPB3-206ENST00000534903 MAGI2Q86UL8 1455 aa8.08□□□□□ -1.12
NPIPB3-206ENST00000534903 PLEKHD1A6NEE1 506 aa8.08□□□□□ -1.12
NPIPB3-206ENST00000534903 ROCK1Q13464 1354 aa8.08□□□□□ -1.12
NPIPB3-206ENST00000534903 SHANK2Q9UPX8 1470 aa8.07□□□□□ -1.12
NPIPB3-206ENST00000534903 NAIPQ13075 1403 aa8.07□□□□□ -1.12
NPIPB3-206ENST00000534903 ADGRL2O95490 1459 aa8.06□□□□□ -1.12
NPIPB3-206ENST00000534903 MYO5CQ9NQX4 1742 aa8.06□□□□□ -1.12
NPIPB3-206ENST00000534903 ARHGEF5Q12774 1597 aa8.06□□□□□ -1.12
NPIPB3-206ENST00000534903 TTC37Q6PGP7 1564 aa8.06□□□□□ -1.12
NPIPB3-206ENST00000534903 U3KPZ7 1027 aaPredicted RBP8.06□□□□□ -1.12
NPIPB3-206ENST00000534903 ACIN1Q9UKV3 1341 aaKnown RBP8.05□□□□□ -1.12
NPIPB3-206ENST00000534903 ABCC5O15440 1437 aa8.05□□□□□ -1.12
NPIPB3-206ENST00000534903 UHRF1BP1Q6BDS2 1440 aa8.05□□□□□ -1.12
NPIPB3-206ENST00000534903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.05□□□□□ -1.12
NPIPB3-206ENST00000534903 CDC42BPBQ9Y5S2 1711 aa8.05□□□□□ -1.12
NPIPB3-206ENST00000534903 ZMYM4Q5VZL5 1548 aa8.04□□□□□ -1.12
NPIPB3-206ENST00000534903 MLECQ14165 292 aa8.04□□□□□ -1.12
NPIPB3-206ENST00000534903 CFDP1Q9UEE9 299 aaPredicted RBP8.04□□□□□ -1.12
NPIPB3-206ENST00000534903 SAMD9LQ8IVG5 1584 aa8.04□□□□□ -1.12
NPIPB3-206ENST00000534903 ZFYVE16Q7Z3T8 1539 aa8.03□□□□□ -1.12
NPIPB3-206ENST00000534903 ARHGEF12Q9NZN5 1544 aa8.03□□□□□ -1.12
NPIPB3-206ENST00000534903 LTBP4Q8N2S1 1624 aa8.03□□□□□ -1.12
NPIPB3-206ENST00000534903 PLEKHH2Q8IVE3 1493 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms