RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 SAFB2Q14151 953 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTNND1-237ENST00000534579 FOXD1Q16676 465 aa11.43□□□□□ -0.58
CTNND1-237ENST00000534579 TMX4Q9H1E5 349 aaPredicted RBP11.42□□□□□ -0.58
CTNND1-237ENST00000534579 HNRNPMP52272 730 aaKnown RBP eCLIP11.42□□□□□ -0.585e-7■■■■□ 21
CTNND1-237ENST00000534579 TMF1P82094 1093 aa11.42□□□□□ -0.58
CTNND1-237ENST00000534579 ANKRD30AQ9BXX3 1397 aa11.42□□□□□ -0.58
CTNND1-237ENST00000534579 CC2D1BQ5T0F9 858 aaKnown RBP11.41□□□□□ -0.58
CTNND1-237ENST00000534579 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
CTNND1-237ENST00000534579 NEUROD2Q15784 382 aa11.41□□□□□ -0.58
CTNND1-237ENST00000534579 MAPK8IP3Q9UPT6 1336 aa11.41□□□□□ -0.58
CTNND1-237ENST00000534579 NUDCQ9Y266 331 aa11.41□□□□□ -0.58
CTNND1-237ENST00000534579 SUPT16HQ9Y5B9 1047 aaKnown RBP11.4□□□□□ -0.58
CTNND1-237ENST00000534579 NUP155O75694 1391 aa11.4□□□□□ -0.58
CTNND1-237ENST00000534579 KIF3BO15066 747 aa11.4□□□□□ -0.58
CTNND1-237ENST00000534579 PLCB2Q00722 1185 aa11.4□□□□□ -0.58
CTNND1-237ENST00000534579 STK26Q9P289 416 aa11.4□□□□□ -0.58
CTNND1-237ENST00000534579 CCDC18Q5T9S5 1454 aa11.4□□□□□ -0.59
CTNND1-237ENST00000534579 KCNJ4P48050 445 aa11.39□□□□□ -0.59
CTNND1-237ENST00000534579 FTSJ3Q8IY81 847 aaKnown RBP11.39□□□□□ -0.59
CTNND1-237ENST00000534579 SPAG9O60271 1321 aaKnown RBP11.38□□□□□ -0.59
CTNND1-237ENST00000534579 FGD5Q6ZNL6 1462 aa11.38□□□□□ -0.59
CTNND1-237ENST00000534579 CYB5RLQ6IPT4 315 aa11.37□□□□□ -0.59
CTNND1-237ENST00000534579 RUSC2Q8N2Y8 1516 aa11.37□□□□□ -0.59
CTNND1-237ENST00000534579 SOX12O15370 315 aa11.37□□□□□ -0.59
CTNND1-237ENST00000534579 OSCARQ8IYS5 282 aa11.37□□□□□ -0.59
CTNND1-237ENST00000534579 U2SURPO15042 1029 aaKnown RBP11.37□□□□□ -0.59
CTNND1-237ENST00000534579 MPHOSPH9Q99550 1183 aa11.37□□□□□ -0.59
CTNND1-237ENST00000534579 PTPRGP23470 1445 aa11.36□□□□□ -0.59
CTNND1-237ENST00000534579 GAPVD1Q14C86 1478 aa11.36□□□□□ -0.59
CTNND1-237ENST00000534579 CCDC9Q9Y3X0 531 aaKnown RBP11.36□□□□□ -0.59
CTNND1-237ENST00000534579 RAD54L2Q9Y4B4 1467 aa11.35□□□□□ -0.59
CTNND1-237ENST00000534579 RAB3GAP2Q9H2M9 1393 aa11.35□□□□□ -0.59
CTNND1-237ENST00000534579 NCAPD3P42695 1498 aa11.35□□□□□ -0.59
CTNND1-237ENST00000534579 TIMELESSQ9UNS1 1208 aa11.34□□□□□ -0.59
CTNND1-237ENST00000534579 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
CTNND1-237ENST00000534579 RSPH4AQ5TD94 716 aa11.34□□□□□ -0.59
CTNND1-237ENST00000534579 WASHC2CQ9Y4E1 1318 aa11.33□□□□□ -0.6
CTNND1-237ENST00000534579 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
CTNND1-237ENST00000534579 G3V3G9 751 aa11.32□□□□□ -0.6
CTNND1-237ENST00000534579 DCAF8Q5TAQ9 597 aa11.32□□□□□ -0.6
CTNND1-237ENST00000534579 KIAA2012Q0VF49 1180 aa11.32□□□□□ -0.6
CTNND1-237ENST00000534579 HSPA5P11021 654 aaKnown RBP11.32□□□□□ -0.6
CTNND1-237ENST00000534579 ROCK2O75116 1388 aaKnown RBP11.31□□□□□ -0.6
CTNND1-237ENST00000534579 NRDCO43847 1150 aa11.31□□□□□ -0.6
CTNND1-237ENST00000534579 GNL2Q13823 731 aaKnown RBP11.31□□□□□ -0.6
CTNND1-237ENST00000534579 MORC1Q86VD1 984 aa11.31□□□□□ -0.6
CTNND1-237ENST00000534579 PNNQ9H307 717 aaKnown RBP11.31□□□□□ -0.6
CTNND1-237ENST00000534579 PDE4CQ08493 712 aa11.31□□□□□ -0.6
CTNND1-237ENST00000534579 NOC3LQ8WTT2 800 aaKnown RBP11.3□□□□□ -0.6
CTNND1-237ENST00000534579 ZNF330Q9Y3S2 320 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-237ENST00000534579 HDGFL2Q7Z4V5 671 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-237ENST00000534579 NUTM2DQ5VT03 806 aaPredicted RBP11.29□□□□□ -0.6
CTNND1-237ENST00000534579 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.62e-9■■■□□ 18.1
CTNND1-237ENST00000534579 GOLGA6L4A6NEF3 574 aa11.29□□□□□ -0.6
CTNND1-237ENST00000534579 PAK3O75914 559 aaPredicted RBP11.29□□□□□ -0.6
CTNND1-237ENST00000534579 L1TD1Q5T7N2 865 aaKnown RBP11.28□□□□□ -0.6
CTNND1-237ENST00000534579 IGF1RP08069 1367 aa11.28□□□□□ -0.6
CTNND1-237ENST00000534579 EID1Q9Y6B2 187 aa11.28□□□□□ -0.6
CTNND1-237ENST00000534579 FRAT1Q92837 279 aaPredicted RBP11.27□□□□□ -0.61
CTNND1-237ENST00000534579 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
CTNND1-237ENST00000534579 CSB-PGBD3P0DP91 1061 aa11.26□□□□□ -0.61
CTNND1-237ENST00000534579 CHAF1AQ13111 956 aaPredicted RBP11.26□□□□□ -0.61
CTNND1-237ENST00000534579 CC2D2AQ9P2K1 1620 aa11.25□□□□□ -0.61
CTNND1-237ENST00000534579 HSP90AB1P08238 724 aaKnown RBP11.25□□□□□ -0.61
CTNND1-237ENST00000534579 EIF3AQ14152 1382 aaKnown RBP11.24□□□□□ -0.61
CTNND1-237ENST00000534579 NESP48681 1621 aa11.23□□□□□ -0.61
CTNND1-237ENST00000534579 DRC7Q8IY82 874 aa11.23□□□□□ -0.61
CTNND1-237ENST00000534579 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
CTNND1-237ENST00000534579 L3MBTL2Q969R5 705 aa11.22□□□□□ -0.61
CTNND1-237ENST00000534579 ANO8Q9HCE9 1232 aaPredicted RBP11.22□□□□□ -0.61
CTNND1-237ENST00000534579 CHMP4BQ9H444 224 aaKnown RBP11.22□□□□□ -0.61
CTNND1-237ENST00000534579 PRDM2Q13029 1718 aa11.22□□□□□ -0.61
CTNND1-237ENST00000534579 FAM69CQ0P6D2 419 aa11.21□□□□□ -0.61
CTNND1-237ENST00000534579 ERICH6BQ5W0A0 696 aa11.21□□□□□ -0.61
CTNND1-237ENST00000534579 RTF1Q92541 710 aaKnown RBP11.21□□□□□ -0.61
CTNND1-237ENST00000534579 VPS53Q5VIR6 699 aa11.2□□□□□ -0.62
CTNND1-237ENST00000534579 RBM19Q9Y4C8 960 aaKnown RBP11.2□□□□□ -0.62
CTNND1-237ENST00000534579 AEBP2Q6ZN18 517 aaPredicted RBP11.2□□□□□ -0.62
CTNND1-237ENST00000534579 GRIN2BQ13224 1484 aa11.2□□□□□ -0.62
CTNND1-237ENST00000534579 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
CTNND1-237ENST00000534579 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
CTNND1-237ENST00000534579 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
CTNND1-237ENST00000534579 A0A0U1RQG5 324 aaPredicted RBP11.19□□□□□ -0.62
CTNND1-237ENST00000534579 FBXO3Q9UK99 471 aa11.19□□□□□ -0.62
CTNND1-237ENST00000534579 CCDC144AA2RUR9 1427 aa11.19□□□□□ -0.62
CTNND1-237ENST00000534579 MCCP23508 829 aa11.19□□□□□ -0.62
CTNND1-237ENST00000534579 CFTRP13569 1480 aa11.19□□□□□ -0.62
CTNND1-237ENST00000534579 NAP1L5Q96NT1 182 aaPredicted RBP11.19□□□□□ -0.62
CTNND1-237ENST00000534579 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
CTNND1-237ENST00000534579 MS4A1P11836 297 aa11.18□□□□□ -0.62
CTNND1-237ENST00000534579 TRAK1Q9UPV9 953 aa11.18□□□□□ -0.62
CTNND1-237ENST00000534579 NUTM2FA1L443 756 aa11.18□□□□□ -0.62
CTNND1-237ENST00000534579 NGDNQ8NEJ9 315 aaKnown RBP11.18□□□□□ -0.62
CTNND1-237ENST00000534579 TERF2IPQ9NYB0 399 aa11.17□□□□□ -0.62
CTNND1-237ENST00000534579 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
CTNND1-237ENST00000534579 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.622e-10■■□□□ 12.3
CTNND1-237ENST00000534579 NOP58Q9Y2X3 529 aaKnown RBP11.17□□□□□ -0.62
CTNND1-237ENST00000534579 DCAF8L1A6NGE4 600 aa11.16□□□□□ -0.62
CTNND1-237ENST00000534579 MSH5O43196 834 aa11.16□□□□□ -0.62
CTNND1-237ENST00000534579 PPP4R2Q9NY27 417 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms