RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 YEATS2Q9ULM3 1422 aa29.07■■■□□ 2.24
RECQL4-207ENST00000534538 TROQ12816 1431 aaPredicted RBP29.03■■■□□ 2.24
RECQL4-207ENST00000534538 MYO5CQ9NQX4 1742 aa28.98■■■□□ 2.23
RECQL4-207ENST00000534538 PCF11O94913 1555 aaKnown RBP28.98■■■□□ 2.23
RECQL4-207ENST00000534538 CLIP1P30622 1438 aa28.97■■■□□ 2.23
RECQL4-207ENST00000534538 RIMS1Q86UR5 1692 aaKnown RBP28.97■■■□□ 2.23
RECQL4-207ENST00000534538 KIF14Q15058 1648 aa28.96■■■□□ 2.23
RECQL4-207ENST00000534538 LMTK3Q96Q04 1460 aa28.96■■■□□ 2.23
RECQL4-207ENST00000534538 ATP10AO60312 1499 aa28.95■■■□□ 2.22
RECQL4-207ENST00000534538 SIGLEC1Q9BZZ2 1709 aa28.94■■■□□ 2.22
RECQL4-207ENST00000534538 MLECQ14165 292 aa28.91■■■□□ 2.22
RECQL4-207ENST00000534538 CASKIN1Q8WXD9 1431 aa28.91■■■□□ 2.22
RECQL4-207ENST00000534538 ZNF518AQ6AHZ1 1483 aa28.9■■■□□ 2.22
RECQL4-207ENST00000534538 ARHGAP5Q13017 1502 aa28.89■■■□□ 2.22
RECQL4-207ENST00000534538 LRRIQ1Q96JM4 1722 aa28.89■■■□□ 2.22
RECQL4-207ENST00000534538 C9orf84Q5VXU9 1444 aa28.89■■■□□ 2.22
RECQL4-207ENST00000534538 AFAP1Q8N556 730 aa28.88■■■□□ 2.21
RECQL4-207ENST00000534538 CCDC18Q5T9S5 1454 aa28.86■■■□□ 2.21
RECQL4-207ENST00000534538 FBXO41Q8TF61 875 aa28.85■■■□□ 2.21
RECQL4-207ENST00000534538 PLPPR3Q6T4P5 718 aa28.84■■■□□ 2.21
RECQL4-207ENST00000534538 KDM5CP41229 1560 aa28.84■■■□□ 2.21
RECQL4-207ENST00000534538 ARHGEF12Q9NZN5 1544 aa28.83■■■□□ 2.21
RECQL4-207ENST00000534538 HSPA2P54652 639 aa28.81■■■□□ 2.2
RECQL4-207ENST00000534538 FER1L4A9Z1Z3 1794 aa28.8■■■□□ 2.2
RECQL4-207ENST00000534538 CDC42BPBQ9Y5S2 1711 aa28.79■■■□□ 2.2
RECQL4-207ENST00000534538 MYT1LQ9UL68 1186 aa28.77■■■□□ 2.2
RECQL4-207ENST00000534538 MLH3Q9UHC1 1453 aa28.77■■■□□ 2.2
RECQL4-207ENST00000534538 FYCO1Q9BQS8 1478 aa28.75■■■□□ 2.19
RECQL4-207ENST00000534538 PREX2Q70Z35 1606 aa28.74■■■□□ 2.19
RECQL4-207ENST00000534538 REREQ9P2R6 1566 aa28.72■■■□□ 2.19
RECQL4-207ENST00000534538 DIP2CQ9Y2E4 1556 aa28.71■■■□□ 2.19
RECQL4-207ENST00000534538 TRAPPC8Q9Y2L5 1435 aa28.71■■■□□ 2.19
RECQL4-207ENST00000534538 ABCC1P33527 1531 aa28.7■■■□□ 2.19
RECQL4-207ENST00000534538 CEBPAP49715 358 aaPredicted RBP28.7■■■□□ 2.18
RECQL4-207ENST00000534538 AGLP35573 1532 aa28.65■■■□□ 2.18
RECQL4-207ENST00000534538 ABCA6Q8N139 1617 aa28.65■■■□□ 2.18
RECQL4-207ENST00000534538 CDC42BPAQ5VT25 1732 aa28.64■■■□□ 2.18
RECQL4-207ENST00000534538 ITSN2Q9NZM3 1697 aa28.64■■■□□ 2.17
RECQL4-207ENST00000534538 PREX1Q8TCU6 1659 aa28.61■■■□□ 2.17
RECQL4-207ENST00000534538 SETD1BQ9UPS6 1966 aaKnown RBP28.61■■■□□ 2.17
RECQL4-207ENST00000534538 GPATCH8Q9UKJ3 1502 aaKnown RBP28.61■■■□□ 2.17
RECQL4-207ENST00000534538 ZNF777Q9ULD5 760 aaPredicted RBP28.59■■■□□ 2.17
RECQL4-207ENST00000534538 KIDINS220Q9ULH0 1771 aa28.58■■■□□ 2.17
RECQL4-207ENST00000534538 ESF1Q9H501 851 aaKnown RBP28.58■■■□□ 2.17
RECQL4-207ENST00000534538 UHRF1BP1Q6BDS2 1440 aa28.56■■■□□ 2.16
RECQL4-207ENST00000534538 SAMD9LQ8IVG5 1584 aa28.54■■■□□ 2.16
RECQL4-207ENST00000534538 KIAA1107Q9UPP5 1409 aa28.54■■■□□ 2.16
RECQL4-207ENST00000534538 HNRNPMP52272 730 aaKnown RBP eCLIP28.54■■■□□ 2.16
RECQL4-207ENST00000534538 CERKQ8TCT0 537 aa28.54■■■□□ 2.16
RECQL4-207ENST00000534538 CFDP1Q9UEE9 299 aaPredicted RBP28.54■■■□□ 2.16
RECQL4-207ENST00000534538 DMRT2Q9Y5R5 561 aa28.54■■■□□ 2.16
RECQL4-207ENST00000534538 SPAG9O60271 1321 aaKnown RBP28.53■■■□□ 2.16
RECQL4-207ENST00000534538 CCNB3Q8WWL7 1395 aa28.51■■■□□ 2.16
RECQL4-207ENST00000534538 PLEKHH2Q8IVE3 1493 aa28.51■■■□□ 2.15
RECQL4-207ENST00000534538 CNTLNQ9NXG0 1405 aa28.51■■■□□ 2.15
RECQL4-207ENST00000534538 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
RECQL4-207ENST00000534538 SYCP2Q9BX26 1530 aa28.49■■■□□ 2.15
RECQL4-207ENST00000534538 C3P01024 1663 aa28.48■■■□□ 2.15
RECQL4-207ENST00000534538 STRCQ7RTU9 1775 aa28.44■■■□□ 2.14
RECQL4-207ENST00000534538 ATP7AQ04656 1500 aa28.41■■■□□ 2.14
RECQL4-207ENST00000534538 ZMYM3Q14202 1370 aa28.38■■■□□ 2.13
RECQL4-207ENST00000534538 NPATQ14207 1427 aa28.38■■■□□ 2.13
RECQL4-207ENST00000534538 INO80Q9ULG1 1556 aaPredicted RBP28.37■■■□□ 2.13
RECQL4-207ENST00000534538 PTPRTO14522 1441 aa28.37■■■□□ 2.13
RECQL4-207ENST00000534538 A2MP01023 1474 aa28.37■■■□□ 2.13
RECQL4-207ENST00000534538 ZNF644Q9H582 1327 aaPredicted RBP28.36■■■□□ 2.13
RECQL4-207ENST00000534538 MROH2AA6NES4 1674 aa28.35■■■□□ 2.13
RECQL4-207ENST00000534538 SUPT6HQ7KZ85 1726 aaKnown RBP28.35■■■□□ 2.13
RECQL4-207ENST00000534538 CEP162Q5TB80 1403 aa28.35■■■□□ 2.13
RECQL4-207ENST00000534538 EHBP1L1Q8N3D4 1523 aa28.34■■■□□ 2.13
RECQL4-207ENST00000534538 PLXNC1O60486 1568 aa28.34■■■□□ 2.13
RECQL4-207ENST00000534538 PPP6R1Q9UPN7 881 aa28.34■■■□□ 2.13
RECQL4-207ENST00000534538 TIAM1Q13009 1591 aa28.33■■■□□ 2.13
RECQL4-207ENST00000534538 MBD5Q9P267 1494 aa28.33■■■□□ 2.13
RECQL4-207ENST00000534538 RTEL1-TNFRSF6BF6WH68 1400 aa28.29■■■□□ 2.12
RECQL4-207ENST00000534538 GGT6Q6P531 493 aa28.29■■■□□ 2.12
RECQL4-207ENST00000534538 NCOA1Q15788 1441 aa28.28■■■□□ 2.12
RECQL4-207ENST00000534538 ADGBQ8N7X0 1667 aa28.25■■■□□ 2.11
RECQL4-207ENST00000534538 RSPH4AQ5TD94 716 aa28.24■■■□□ 2.11
RECQL4-207ENST00000534538 DHX29Q7Z478 1369 aaKnown RBP28.23■■■□□ 2.11
RECQL4-207ENST00000534538 CLTCQ00610 1675 aaKnown RBP28.23■■■□□ 2.11
RECQL4-207ENST00000534538 PTPRKQ15262 1439 aa28.22■■■□□ 2.11
RECQL4-207ENST00000534538 CAMSAP1Q5T5Y3 1602 aa28.2■■■□□ 2.1
RECQL4-207ENST00000534538 NCOA2Q15596 1464 aa28.2■■■□□ 2.1
RECQL4-207ENST00000534538 LTBP4Q8N2S1 1624 aa28.16■■■□□ 2.1
RECQL4-207ENST00000534538 CCDC141Q6ZP82 1450 aa28.15■■■□□ 2.1
RECQL4-207ENST00000534538 PKD2Q13563 968 aa28.15■■■□□ 2.1
RECQL4-207ENST00000534538 NCKAP5LQ9HCH0 1330 aa28.14■■■□□ 2.09
RECQL4-207ENST00000534538 CAMSAP2Q08AD1 1489 aa28.13■■■□□ 2.09
RECQL4-207ENST00000534538 PLA2R1Q13018 1463 aa28.13■■■□□ 2.09
RECQL4-207ENST00000534538 KIF3BO15066 747 aa28.12■■■□□ 2.09
RECQL4-207ENST00000534538 ZNF142P52746 1687 aaPredicted RBP28.12■■■□□ 2.09
RECQL4-207ENST00000534538 MYO3AQ8NEV4 1616 aa28.11■■■□□ 2.09
RECQL4-207ENST00000534538 IQSEC2Q5JU85 1478 aa28.11■■■□□ 2.09
RECQL4-207ENST00000534538 CEP170BQ9Y4F5 1589 aaPredicted RBP28.1■■■□□ 2.09
RECQL4-207ENST00000534538 VPS8Q8N3P4 1428 aa28.09■■■□□ 2.09
RECQL4-207ENST00000534538 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
RECQL4-207ENST00000534538 TSPY4P0CV99 314 aa28.08■■■□□ 2.09
RECQL4-207ENST00000534538 TSPY10P0CW01 314 aa28.08■■■□□ 2.09
RECQL4-207ENST00000534538 TCOF1Q13428 1488 aaKnown RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms