RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 PPP1R37O75864 691 aa9.39□□□□□ -0.91
ECHDC1-223ENST00000534442 CERKQ8TCT0 537 aa9.39□□□□□ -0.91
ECHDC1-223ENST00000534442 CABP2Q9NPB3 220 aa9.38□□□□□ -0.91
ECHDC1-223ENST00000534442 ZRANB1Q9UGI0 708 aa9.38□□□□□ -0.91
ECHDC1-223ENST00000534442 PHF12Q96QT6 1004 aa9.37□□□□□ -0.91
ECHDC1-223ENST00000534442 SMARCA4P51532 1647 aa9.36□□□□□ -0.91
ECHDC1-223ENST00000534442 PHF8Q9UPP1 1060 aa9.36□□□□□ -0.91
ECHDC1-223ENST00000534442 SOX12O15370 315 aa9.35□□□□□ -0.91
ECHDC1-223ENST00000534442 CD44P16070 742 aaKnown RBP9.35□□□□□ -0.91
ECHDC1-223ENST00000534442 NLRP6P59044 892 aa9.35□□□□□ -0.91
ECHDC1-223ENST00000534442 GAPVD1Q14C86 1478 aa9.34□□□□□ -0.91
ECHDC1-223ENST00000534442 P3H3Q8IVL6 736 aa9.34□□□□□ -0.91
ECHDC1-223ENST00000534442 KCNV2Q8TDN2 545 aa9.34□□□□□ -0.91
ECHDC1-223ENST00000534442 WDR70Q9NW82 654 aa9.34□□□□□ -0.91
ECHDC1-223ENST00000534442 CADPSQ9ULU8 1353 aa9.33□□□□□ -0.92
ECHDC1-223ENST00000534442 BAZ1BQ9UIG0 1483 aaKnown RBP9.33□□□□□ -0.92
ECHDC1-223ENST00000534442 CLASP1Q7Z460 1538 aa9.31□□□□□ -0.92
ECHDC1-223ENST00000534442 MS4A4AQ96JQ5 239 aa9.29□□□□□ -0.92
ECHDC1-223ENST00000534442 TRPC6Q9Y210 931 aa9.29□□□□□ -0.92
ECHDC1-223ENST00000534442 URB2Q14146 1524 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-223ENST00000534442 EIF4G3O43432 1585 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-223ENST00000534442 FAM69CQ0P6D2 419 aa9.27□□□□□ -0.93
ECHDC1-223ENST00000534442 C19orf67A6NJJ6 358 aa9.26□□□□□ -0.93
ECHDC1-223ENST00000534442 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
ECHDC1-223ENST00000534442 TMEM106CQ9BVX2 250 aa9.26□□□□□ -0.93
ECHDC1-223ENST00000534442 FANCD2Q9BXW9 1451 aa9.26□□□□□ -0.93
ECHDC1-223ENST00000534442 IFT140Q96RY7 1462 aa9.24□□□□□ -0.93
ECHDC1-223ENST00000534442 NCKAP5LQ9HCH0 1330 aa9.24□□□□□ -0.93
ECHDC1-223ENST00000534442 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.23□□□□□ -0.93
ECHDC1-223ENST00000534442 E2F4Q16254 413 aa9.22□□□□□ -0.93
ECHDC1-223ENST00000534442 ARHGEF1Q92888 912 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-223ENST00000534442 DCAF1Q9Y4B6 1507 aa9.21□□□□□ -0.93
ECHDC1-223ENST00000534442 ABCC10Q5T3U5 1492 aa9.21□□□□□ -0.94
ECHDC1-223ENST00000534442 GOLGA2Q08379 1002 aa9.19□□□□□ -0.94
ECHDC1-223ENST00000534442 LMOD2Q6P5Q4 547 aa9.19□□□□□ -0.94
ECHDC1-223ENST00000534442 SRCAPQ6ZRS2 3230 aa9.18□□□□□ -0.94
ECHDC1-223ENST00000534442 TOP2BQ02880 1626 aa9.18□□□□□ -0.94
ECHDC1-223ENST00000534442 MFSD10Q14728 455 aa9.18□□□□□ -0.94
ECHDC1-223ENST00000534442 LARP6Q9BRS8 491 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-223ENST00000534442 CRISPLD2Q9H0B8 497 aa9.18□□□□□ -0.94
ECHDC1-223ENST00000534442 PDE4AP27815 886 aa9.17□□□□□ -0.94
ECHDC1-223ENST00000534442 TSPOAP1O95153 1857 aa9.17□□□□□ -0.94
ECHDC1-223ENST00000534442 SYNJ1O43426 1573 aa9.16□□□□□ -0.94
ECHDC1-223ENST00000534442 DIP2BQ9P265 1576 aa9.16□□□□□ -0.94
ECHDC1-223ENST00000534442 TTLL13PA6NNM8 815 aa9.16□□□□□ -0.94
ECHDC1-223ENST00000534442 TIE1P35590 1138 aa9.16□□□□□ -0.94
ECHDC1-223ENST00000534442 MKRN3Q13064 507 aaKnown RBP9.16□□□□□ -0.94
ECHDC1-223ENST00000534442 IFFO2Q5TF58 517 aa9.16□□□□□ -0.94
ECHDC1-223ENST00000534442 BMP2KQ9NSY1 1161 aaPredicted RBP9.15□□□□□ -0.94
ECHDC1-223ENST00000534442 SEMA3EO15041 775 aa9.14□□□□□ -0.95
ECHDC1-223ENST00000534442 AQRO60306 1485 aaKnown RBP eCLIP9.14□□□□□ -0.95
ECHDC1-223ENST00000534442 PCF11O94913 1555 aaKnown RBP9.13□□□□□ -0.95
ECHDC1-223ENST00000534442 TESPA1A2RU30 521 aaPredicted RBP9.13□□□□□ -0.95
ECHDC1-223ENST00000534442 DDX27Q96GQ7 796 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-223ENST00000534442 GALR2O43603 387 aaPredicted RBP9.11□□□□□ -0.95
ECHDC1-223ENST00000534442 CAMK2BQ13554 666 aa9.11□□□□□ -0.95
ECHDC1-223ENST00000534442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.11□□□□□ -0.953e-7■■□□□ 13.1
ECHDC1-223ENST00000534442 ARIH1Q9Y4X5 557 aaPredicted RBP9.11□□□□□ -0.95
ECHDC1-223ENST00000534442 MED1Q15648 1581 aaPredicted RBP9.11□□□□□ -0.95
ECHDC1-223ENST00000534442 SNAPC4Q5SXM2 1469 aa9.1□□□□□ -0.95
ECHDC1-223ENST00000534442 ZCCHC6Q5VYS8 1495 aaKnown RBP9.08□□□□□ -0.96
ECHDC1-223ENST00000534442 EVX2Q03828 476 aa9.08□□□□□ -0.96
ECHDC1-223ENST00000534442 DPY19L2Q6NUT2 758 aa9.08□□□□□ -0.96
ECHDC1-223ENST00000534442 TRIM35Q9UPQ4 493 aa9.08□□□□□ -0.96
ECHDC1-223ENST00000534442 TULP1O00294 542 aaPredicted RBP9.07□□□□□ -0.96
ECHDC1-223ENST00000534442 ZC3H15Q8WU90 426 aaKnown RBP9.07□□□□□ -0.96
ECHDC1-223ENST00000534442 GPHNQ9NQX3 736 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-223ENST00000534442 HSPA2P54652 639 aa9.03□□□□□ -0.96
ECHDC1-223ENST00000534442 PPP1R15BQ5SWA1 713 aa9.03□□□□□ -0.96
ECHDC1-223ENST00000534442 PDCD7Q8N8D1 485 aaKnown RBP9.03□□□□□ -0.96
ECHDC1-223ENST00000534442 CHMP7Q8WUX9 453 aaPredicted RBP9.03□□□□□ -0.96
ECHDC1-223ENST00000534442 MAPKBP1O60336 1514 aa9.03□□□□□ -0.96
ECHDC1-223ENST00000534442 PEG3Q9GZU2 1588 aa9.03□□□□□ -0.96
ECHDC1-223ENST00000534442 HAX1O00165 279 aa9.02□□□□□ -0.97
ECHDC1-223ENST00000534442 ATN1P54259 1190 aaPredicted RBP9.02□□□□□ -0.97
ECHDC1-223ENST00000534442 MICALL2Q8IY33 904 aa9.01□□□□□ -0.97
ECHDC1-223ENST00000534442 PTPRMP28827 1452 aa9.01□□□□□ -0.97
ECHDC1-223ENST00000534442 ATMINO43313 823 aaPredicted RBP9□□□□□ -0.97
ECHDC1-223ENST00000534442 CLCN6P51797 869 aa8.99□□□□□ -0.97
ECHDC1-223ENST00000534442 IRX5P78411 483 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-223ENST00000534442 DSG2Q14126 1118 aa8.99□□□□□ -0.97
ECHDC1-223ENST00000534442 SMYD5Q6GMV2 418 aa8.99□□□□□ -0.97
ECHDC1-223ENST00000534442 EMILIN3Q9NT22 766 aa8.99□□□□□ -0.97
ECHDC1-223ENST00000534442 COL17A1Q9UMD9 1497 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-223ENST00000534442 MLLT3P42568 568 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-223ENST00000534442 TMEM132AQ24JP5 1023 aa8.98□□□□□ -0.97
ECHDC1-223ENST00000534442 ZMYND10O75800 440 aa8.97□□□□□ -0.97
ECHDC1-223ENST00000534442 BRPF1P55201 1214 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-223ENST00000534442 ASTLQ6HA08 431 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-223ENST00000534442 TMEM121BQ9BXQ6 578 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-223ENST00000534442 SLC24A3Q9HC58 644 aa8.97□□□□□ -0.97
ECHDC1-223ENST00000534442 DPYSL4O14531 572 aa8.96□□□□□ -0.98
ECHDC1-223ENST00000534442 OCEL1Q9H607 264 aa8.96□□□□□ -0.98
ECHDC1-223ENST00000534442 TARBP1Q13395 1621 aaKnown RBP8.95□□□□□ -0.98
ECHDC1-223ENST00000534442 FOXK1P85037 733 aa8.95□□□□□ -0.98
ECHDC1-223ENST00000534442 GTF3C3Q9Y5Q9 886 aa8.95□□□□□ -0.98
ECHDC1-223ENST00000534442 RBM26Q5T8P6 1007 aaKnown RBP8.94□□□□□ -0.98
ECHDC1-223ENST00000534442 IER5LQ5T953 404 aa8.94□□□□□ -0.98
ECHDC1-223ENST00000534442 TMC2Q8TDI7 906 aa8.94□□□□□ -0.98
ECHDC1-223ENST00000534442 BOLA1Q9Y3E2 137 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms