RNA–Protein interactions for RNA: ENST00000534098.1

TTC39A-218, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2

Gene TTC39A, Length 930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-218ENST00000534098 SCAPERQ9BY12 1400 aa19.55■□□□□ 0.72
TTC39A-218ENST00000534098 HSPA2P54652 639 aa19.54■□□□□ 0.72
TTC39A-218ENST00000534098 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
TTC39A-218ENST00000534098 ARHGEF12Q9NZN5 1544 aa19.51■□□□□ 0.71
TTC39A-218ENST00000534098 MLECQ14165 292 aa19.5■□□□□ 0.71
TTC39A-218ENST00000534098 ATP10AO60312 1499 aa19.49■□□□□ 0.71
TTC39A-218ENST00000534098 KIF14Q15058 1648 aa19.49■□□□□ 0.71
TTC39A-218ENST00000534098 FMN1Q68DA7 1419 aa19.49■□□□□ 0.71
TTC39A-218ENST00000534098 PREX1Q8TCU6 1659 aa19.48■□□□□ 0.71
TTC39A-218ENST00000534098 C9orf84Q5VXU9 1444 aa19.48■□□□□ 0.71
TTC39A-218ENST00000534098 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
TTC39A-218ENST00000534098 LRRIQ1Q96JM4 1722 aa19.47■□□□□ 0.71
TTC39A-218ENST00000534098 EFCAB2Q5VUJ9 269 aa19.45■□□□□ 0.7
TTC39A-218ENST00000534098 KDM5CP41229 1560 aa19.44■□□□□ 0.7
TTC39A-218ENST00000534098 ZNF518AQ6AHZ1 1483 aa19.43■□□□□ 0.7
TTC39A-218ENST00000534098 ATP1B4Q9UN42 357 aaPredicted RBP19.43■□□□□ 0.7
TTC39A-218ENST00000534098 TROQ12816 1431 aaPredicted RBP19.42■□□□□ 0.7
TTC39A-218ENST00000534098 ARHGAP5Q13017 1502 aa19.41■□□□□ 0.7
TTC39A-218ENST00000534098 UBTFP17480 764 aaKnown RBP19.41■□□□□ 0.7
TTC39A-218ENST00000534098 CDK11AQ9UQ88 783 aaPredicted RBP19.41■□□□□ 0.7
TTC39A-218ENST00000534098 CDC42BPBQ9Y5S2 1711 aa19.41■□□□□ 0.7
TTC39A-218ENST00000534098 SETD1BQ9UPS6 1966 aaKnown RBP19.41■□□□□ 0.7
TTC39A-218ENST00000534098 CERKQ8TCT0 537 aa19.4■□□□□ 0.7
TTC39A-218ENST00000534098 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
TTC39A-218ENST00000534098 DIP2CQ9Y2E4 1556 aa19.4■□□□□ 0.7
TTC39A-218ENST00000534098 STRCQ7RTU9 1775 aa19.39■□□□□ 0.69
TTC39A-218ENST00000534098 REREQ9P2R6 1566 aa19.38■□□□□ 0.69
TTC39A-218ENST00000534098 CLIP1P30622 1438 aa19.37■□□□□ 0.69
TTC39A-218ENST00000534098 CEBPAP49715 358 aaPredicted RBP19.37■□□□□ 0.69
TTC39A-218ENST00000534098 ABCA6Q8N139 1617 aa19.36■□□□□ 0.69
TTC39A-218ENST00000534098 AFAP1Q8N556 730 aa19.36■□□□□ 0.69
TTC39A-218ENST00000534098 PREX2Q70Z35 1606 aa19.36■□□□□ 0.69
TTC39A-218ENST00000534098 C3P01024 1663 aa19.33■□□□□ 0.69
TTC39A-218ENST00000534098 MLH3Q9UHC1 1453 aa19.33■□□□□ 0.68
TTC39A-218ENST00000534098 ITSN2Q9NZM3 1697 aa19.33■□□□□ 0.68
TTC39A-218ENST00000534098 ABCC1P33527 1531 aa19.32■□□□□ 0.68
TTC39A-218ENST00000534098 UHRF1BP1Q6BDS2 1440 aa19.32■□□□□ 0.68
TTC39A-218ENST00000534098 AGLP35573 1532 aa19.3■□□□□ 0.68
TTC39A-218ENST00000534098 CDC42BPAQ5VT25 1732 aa19.3■□□□□ 0.68
TTC39A-218ENST00000534098 TRAPPC8Q9Y2L5 1435 aa19.29■□□□□ 0.68
TTC39A-218ENST00000534098 MYT1LQ9UL68 1186 aa19.29■□□□□ 0.68
TTC39A-218ENST00000534098 KIDINS220Q9ULH0 1771 aa19.29■□□□□ 0.68
TTC39A-218ENST00000534098 CCDC18Q5T9S5 1454 aa19.28■□□□□ 0.68
TTC39A-218ENST00000534098 CASKIN1Q8WXD9 1431 aa19.26■□□□□ 0.67
TTC39A-218ENST00000534098 DMRT2Q9Y5R5 561 aa19.26■□□□□ 0.67
TTC39A-218ENST00000534098 PTPRTO14522 1441 aa19.22■□□□□ 0.67
TTC39A-218ENST00000534098 SAMD9LQ8IVG5 1584 aa19.2■□□□□ 0.66
TTC39A-218ENST00000534098 MROH2AA6NES4 1674 aa19.2■□□□□ 0.66
TTC39A-218ENST00000534098 CNTLNQ9NXG0 1405 aa19.19■□□□□ 0.66
TTC39A-218ENST00000534098 FYCO1Q9BQS8 1478 aa19.18■□□□□ 0.66
TTC39A-218ENST00000534098 ESF1Q9H501 851 aaKnown RBP19.18■□□□□ 0.66
TTC39A-218ENST00000534098 LTBP4Q8N2S1 1624 aa19.17■□□□□ 0.66
TTC39A-218ENST00000534098 SYCP2Q9BX26 1530 aa19.16■□□□□ 0.66
TTC39A-218ENST00000534098 SUPT6HQ7KZ85 1726 aaKnown RBP19.16■□□□□ 0.66
TTC39A-218ENST00000534098 NCOA1Q15788 1441 aa19.15■□□□□ 0.66
TTC39A-218ENST00000534098 NPATQ14207 1427 aa19.13■□□□□ 0.65
TTC39A-218ENST00000534098 GPATCH8Q9UKJ3 1502 aaKnown RBP19.13■□□□□ 0.65
TTC39A-218ENST00000534098 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
TTC39A-218ENST00000534098 CAMSAP1Q5T5Y3 1602 aa19.11■□□□□ 0.65
TTC39A-218ENST00000534098 INO80Q9ULG1 1556 aaPredicted RBP19.11■□□□□ 0.65
TTC39A-218ENST00000534098 ATP7AQ04656 1500 aa19.11■□□□□ 0.65
TTC39A-218ENST00000534098 DISP3Q9P2K9 1392 aa19.11■□□□□ 0.65
TTC39A-218ENST00000534098 CLTCQ00610 1675 aaKnown RBP19.11■□□□□ 0.65
TTC39A-218ENST00000534098 PLXNC1O60486 1568 aa19.1■□□□□ 0.65
TTC39A-218ENST00000534098 IQSEC2Q5JU85 1478 aa19.1■□□□□ 0.65
TTC39A-218ENST00000534098 ZNF777Q9ULD5 760 aaPredicted RBP19.1■□□□□ 0.65
TTC39A-218ENST00000534098 SPAG9O60271 1321 aaKnown RBP19.09■□□□□ 0.65
TTC39A-218ENST00000534098 ZNF142P52746 1687 aaPredicted RBP19.09■□□□□ 0.65
TTC39A-218ENST00000534098 ZMYM3Q14202 1370 aa19.08■□□□□ 0.65
TTC39A-218ENST00000534098 ILDR2Q71H61 639 aa19.08■□□□□ 0.64
TTC39A-218ENST00000534098 KIAA1107Q9UPP5 1409 aa19.08■□□□□ 0.64
TTC39A-218ENST00000534098 MYO3AQ8NEV4 1616 aa19.07■□□□□ 0.64
TTC39A-218ENST00000534098 HNRNPMP52272 730 aaKnown RBP eCLIP19.07■□□□□ 0.64
TTC39A-218ENST00000534098 PLEKHH2Q8IVE3 1493 aa19.07■□□□□ 0.64
TTC39A-218ENST00000534098 SPATA31D1Q6ZQQ2 1576 aa19.06■□□□□ 0.64
TTC39A-218ENST00000534098 A2MP01023 1474 aa19.05■□□□□ 0.64
TTC39A-218ENST00000534098 ADGBQ8N7X0 1667 aa19.05■□□□□ 0.64
TTC39A-218ENST00000534098 CEP170BQ9Y4F5 1589 aaPredicted RBP19.02■□□□□ 0.64
TTC39A-218ENST00000534098 CFDP1Q9UEE9 299 aaPredicted RBP19.02■□□□□ 0.64
TTC39A-218ENST00000534098 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
TTC39A-218ENST00000534098 PLA2R1Q13018 1463 aa19.02■□□□□ 0.63
TTC39A-218ENST00000534098 PTPRKQ15262 1439 aa19.01■□□□□ 0.63
TTC39A-218ENST00000534098 NCKAP5LQ9HCH0 1330 aa19■□□□□ 0.63
TTC39A-218ENST00000534098 TIAM1Q13009 1591 aa18.99■□□□□ 0.63
TTC39A-218ENST00000534098 SOCS7O14512 581 aa18.99■□□□□ 0.63
TTC39A-218ENST00000534098 TCOF1Q13428 1488 aaKnown RBP18.98■□□□□ 0.63
TTC39A-218ENST00000534098 MTUS2Q5JR59 1369 aa18.97■□□□□ 0.63
TTC39A-218ENST00000534098 ZNF335Q9H4Z2 1342 aaPredicted RBP18.97■□□□□ 0.63
TTC39A-218ENST00000534098 GGT6Q6P531 493 aa18.96■□□□□ 0.63
TTC39A-218ENST00000534098 PKD2Q13563 968 aa18.95■□□□□ 0.62
TTC39A-218ENST00000534098 MBD5Q9P267 1494 aa18.95■□□□□ 0.62
TTC39A-218ENST00000534098 EHBP1L1Q8N3D4 1523 aa18.95■□□□□ 0.62
TTC39A-218ENST00000534098 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
TTC39A-218ENST00000534098 DNMT1P26358 1616 aaKnown RBP18.93■□□□□ 0.62
TTC39A-218ENST00000534098 ZNF644Q9H582 1327 aaPredicted RBP18.93■□□□□ 0.62
TTC39A-218ENST00000534098 A2ML1A8K2U0 1454 aa18.92■□□□□ 0.62
TTC39A-218ENST00000534098 RTEL1-TNFRSF6BF6WH68 1400 aa18.91■□□□□ 0.62
TTC39A-218ENST00000534098 POLR1AO95602 1720 aaPredicted RBP18.91■□□□□ 0.62
TTC39A-218ENST00000534098 UBAP1LF5GYI3 381 aa18.89■□□□□ 0.61
TTC39A-218ENST00000534098 CEP162Q5TB80 1403 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms