RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 ZMYM4Q5VZL5 1548 aa15.53■□□□□ 0.08
LDLRAD3-206ENST00000534091 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.08
LDLRAD3-206ENST00000534091 FRMPD1Q5SYB0 1578 aa15.52■□□□□ 0.07
LDLRAD3-206ENST00000534091 ADGRL1O94910 1474 aa15.52■□□□□ 0.07
LDLRAD3-206ENST00000534091 PREX2Q70Z35 1606 aa15.5■□□□□ 0.07
LDLRAD3-206ENST00000534091 ARHGAP5Q13017 1502 aa15.49■□□□□ 0.07
LDLRAD3-206ENST00000534091 RAPGEF3O95398 923 aa15.49■□□□□ 0.07
LDLRAD3-206ENST00000534091 MTUS2Q5JR59 1369 aa15.49■□□□□ 0.07
LDLRAD3-206ENST00000534091 CDC42BPBQ9Y5S2 1711 aa15.48■□□□□ 0.07
LDLRAD3-206ENST00000534091 KDM4FA0A1W2PPD8 638 aa15.48■□□□□ 0.07
LDLRAD3-206ENST00000534091 PPARGC1BQ86YN6 1023 aaKnown RBP15.48■□□□□ 0.07
LDLRAD3-206ENST00000534091 POGZQ7Z3K3 1410 aa15.48■□□□□ 0.07
LDLRAD3-206ENST00000534091 SCAPERQ9BY12 1400 aa15.48■□□□□ 0.07
LDLRAD3-206ENST00000534091 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
LDLRAD3-206ENST00000534091 ZNF518AQ6AHZ1 1483 aa15.46■□□□□ 0.07
LDLRAD3-206ENST00000534091 CDC42BPAQ5VT25 1732 aa15.46■□□□□ 0.07
LDLRAD3-206ENST00000534091 KANK4Q5T7N3 995 aaPredicted RBP15.46■□□□□ 0.07
LDLRAD3-206ENST00000534091 PCGF6Q9BYE7 350 aa15.46■□□□□ 0.07
LDLRAD3-206ENST00000534091 ARHGEF40Q8TER5 1519 aa15.46■□□□□ 0.07
LDLRAD3-206ENST00000534091 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
LDLRAD3-206ENST00000534091 PLEKHH2Q8IVE3 1493 aa15.43■□□□□ 0.06
LDLRAD3-206ENST00000534091 KDM5CP41229 1560 aa15.43■□□□□ 0.06
LDLRAD3-206ENST00000534091 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
LDLRAD3-206ENST00000534091 GPATCH8Q9UKJ3 1502 aaKnown RBP15.43■□□□□ 0.06
LDLRAD3-206ENST00000534091 ABCC1P33527 1531 aa15.42■□□□□ 0.06
LDLRAD3-206ENST00000534091 CCNB3Q8WWL7 1395 aa15.41■□□□□ 0.06
LDLRAD3-206ENST00000534091 RRBP1Q9P2E9 1410 aaKnown RBP15.41■□□□□ 0.06
LDLRAD3-206ENST00000534091 KIAA1107Q9UPP5 1409 aa15.41■□□□□ 0.06
LDLRAD3-206ENST00000534091 ITSN2Q9NZM3 1697 aa15.41■□□□□ 0.06
LDLRAD3-206ENST00000534091 MLH3Q9UHC1 1453 aa15.4■□□□□ 0.06
LDLRAD3-206ENST00000534091 HECW2Q9P2P5 1572 aa15.37■□□□□ 0.05
LDLRAD3-206ENST00000534091 CFDP1Q9UEE9 299 aaPredicted RBP15.37■□□□□ 0.05
LDLRAD3-206ENST00000534091 ATP10AO60312 1499 aa15.37■□□□□ 0.05
LDLRAD3-206ENST00000534091 ADAMTSL3P82987 1691 aa15.37■□□□□ 0.05
LDLRAD3-206ENST00000534091 BCORL1Q5H9F3 1711 aa15.37■□□□□ 0.05
LDLRAD3-206ENST00000534091 REREQ9P2R6 1566 aa15.36■□□□□ 0.05
LDLRAD3-206ENST00000534091 C9orf84Q5VXU9 1444 aa15.35■□□□□ 0.05
LDLRAD3-206ENST00000534091 SAMD9LQ8IVG5 1584 aa15.35■□□□□ 0.05
LDLRAD3-206ENST00000534091 YEATS2Q9ULM3 1422 aa15.34■□□□□ 0.05
LDLRAD3-206ENST00000534091 NCOA2Q15596 1464 aa15.34■□□□□ 0.05
LDLRAD3-206ENST00000534091 ARHGEF12Q9NZN5 1544 aa15.33■□□□□ 0.05
LDLRAD3-206ENST00000534091 AFAP1Q8N556 730 aa15.33■□□□□ 0.04
LDLRAD3-206ENST00000534091 RSPH4AQ5TD94 716 aa15.32■□□□□ 0.04
LDLRAD3-206ENST00000534091 ARID4BQ4LE39 1312 aaPredicted RBP15.32■□□□□ 0.04
LDLRAD3-206ENST00000534091 TRAPPC8Q9Y2L5 1435 aa15.32■□□□□ 0.04
LDLRAD3-206ENST00000534091 SYCP2Q9BX26 1530 aa15.31■□□□□ 0.04
LDLRAD3-206ENST00000534091 AGLP35573 1532 aa15.3■□□□□ 0.04
LDLRAD3-206ENST00000534091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.3■□□□□ 0.04
LDLRAD3-206ENST00000534091 DIP2CQ9Y2E4 1556 aa15.3■□□□□ 0.04
LDLRAD3-206ENST00000534091 ZNF777Q9ULD5 760 aaPredicted RBP15.29■□□□□ 0.04
LDLRAD3-206ENST00000534091 KIDINS220Q9ULH0 1771 aa15.29■□□□□ 0.04
LDLRAD3-206ENST00000534091 MYOM3Q5VTT5 1437 aa15.28■□□□□ 0.04
LDLRAD3-206ENST00000534091 RTEL1-TNFRSF6BF6WH68 1400 aa15.27■□□□□ 0.04
LDLRAD3-206ENST00000534091 MIA2Q96PC5 1412 aa15.27■□□□□ 0.04
LDLRAD3-206ENST00000534091 SPAG9O60271 1321 aaKnown RBP15.27■□□□□ 0.04
LDLRAD3-206ENST00000534091 ABCA6Q8N139 1617 aa15.27■□□□□ 0.03
LDLRAD3-206ENST00000534091 PTPRMP28827 1452 aa15.27■□□□□ 0.03
LDLRAD3-206ENST00000534091 MBD5Q9P267 1494 aa15.27■□□□□ 0.03
LDLRAD3-206ENST00000534091 FGD6Q6ZV73 1430 aa15.26■□□□□ 0.03
LDLRAD3-206ENST00000534091 MADDQ8WXG6 1647 aa15.26■□□□□ 0.03
LDLRAD3-206ENST00000534091 MYT1LQ9UL68 1186 aa15.26■□□□□ 0.03
LDLRAD3-206ENST00000534091 INO80Q9ULG1 1556 aaPredicted RBP15.26■□□□□ 0.03
LDLRAD3-206ENST00000534091 HNRNPMP52272 730 aaKnown RBP eCLIP15.25■□□□□ 0.03
LDLRAD3-206ENST00000534091 ATP7AQ04656 1500 aa15.25■□□□□ 0.03
LDLRAD3-206ENST00000534091 SIGLEC1Q9BZZ2 1709 aa15.25■□□□□ 0.03
LDLRAD3-206ENST00000534091 ARHGEF5Q12774 1597 aa15.24■□□□□ 0.03
LDLRAD3-206ENST00000534091 CAMSAP2Q08AD1 1489 aa15.23■□□□□ 0.03
LDLRAD3-206ENST00000534091 TCOF1Q13428 1488 aaKnown RBP15.23■□□□□ 0.03
LDLRAD3-206ENST00000534091 PTPN23Q9H3S7 1636 aa15.23■□□□□ 0.03
LDLRAD3-206ENST00000534091 FER1L4A9Z1Z3 1794 aa15.23■□□□□ 0.03
LDLRAD3-206ENST00000534091 CCDC141Q6ZP82 1450 aa15.22■□□□□ 0.03
LDLRAD3-206ENST00000534091 ADGBQ8N7X0 1667 aa15.22■□□□□ 0.03
LDLRAD3-206ENST00000534091 RIMS1Q86UR5 1692 aaKnown RBP15.21■□□□□ 0.03
LDLRAD3-206ENST00000534091 PLXNC1O60486 1568 aa15.19■□□□□ 0.02
LDLRAD3-206ENST00000534091 CNTLNQ9NXG0 1405 aa15.19■□□□□ 0.02
LDLRAD3-206ENST00000534091 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
LDLRAD3-206ENST00000534091 A2MP01023 1474 aa15.19■□□□□ 0.02
LDLRAD3-206ENST00000534091 ZNF644Q9H582 1327 aaPredicted RBP15.18■□□□□ 0.02
LDLRAD3-206ENST00000534091 TSPY4P0CV99 314 aa15.17■□□□□ 0.02
LDLRAD3-206ENST00000534091 TSPY10P0CW01 314 aa15.17■□□□□ 0.02
LDLRAD3-206ENST00000534091 SETD1BQ9UPS6 1966 aaKnown RBP15.16■□□□□ 0.02
LDLRAD3-206ENST00000534091 MAST1Q9Y2H9 1570 aa15.16■□□□□ 0.02
LDLRAD3-206ENST00000534091 FAM135AQ9P2D6 1515 aa15.15■□□□□ 0.02
LDLRAD3-206ENST00000534091 DHX29Q7Z478 1369 aaKnown RBP15.14■□□□□ 0.01
LDLRAD3-206ENST00000534091 MLECQ14165 292 aa15.14■□□□□ 0.01
LDLRAD3-206ENST00000534091 ESF1Q9H501 851 aaKnown RBP15.14■□□□□ 0.01
LDLRAD3-206ENST00000534091 MROH2AA6NES4 1674 aa15.13■□□□□ 0.01
LDLRAD3-206ENST00000534091 DNMT1P26358 1616 aaKnown RBP15.11■□□□□ 0.01
LDLRAD3-206ENST00000534091 SHANK2Q9UPX8 1470 aa15.11■□□□□ 0.01
LDLRAD3-206ENST00000534091 FAM50AQ14320 339 aaKnown RBP15.1■□□□□ 0.01
LDLRAD3-206ENST00000534091 CROCC2H7BZ55 1655 aa15.08■□□□□ 0
LDLRAD3-206ENST00000534091 LMTK3Q96Q04 1460 aa15.08■□□□□ 0
LDLRAD3-206ENST00000534091 EIF2AK4Q9P2K8 1649 aaKnown RBP15.07■□□□□ 0
LDLRAD3-206ENST00000534091 C3P01024 1663 aa15.07■□□□□ 0
LDLRAD3-206ENST00000534091 PREX1Q8TCU6 1659 aa15.07■□□□□ 0
LDLRAD3-206ENST00000534091 NPATQ14207 1427 aa15.07■□□□□ 0
LDLRAD3-206ENST00000534091 GCC2Q8IWJ2 1684 aa15.06■□□□□ 0
LDLRAD3-206ENST00000534091 DUOX2Q9NRD8 1548 aa15.04■□□□□ -0
LDLRAD3-206ENST00000534091 DAPK1P53355 1430 aa15.04■□□□□ -0
LDLRAD3-206ENST00000534091 PTPRKQ15262 1439 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms