RNA–Protein interactions for RNA: ENST00000534044.5

MYB-238, Transcript of MYB proto-oncogene, transcription factor, human

TSL 1 (best) BASIC

Gene MYB, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MYB-238	ENST00000534044	PLPPR3	Q6T4P5	718 aa		11.94	□□□□□ -0.5
MYB-238	ENST00000534044	PLCH2	O75038	1416 aa		11.94	□□□□□ -0.5
MYB-238	ENST00000534044	TCOF1	Q13428	1488 aa	Known RBP	11.94	□□□□□ -0.5
MYB-238	ENST00000534044	CDC42BPB	Q9Y5S2	1711 aa		11.94	□□□□□ -0.5
MYB-238	ENST00000534044	EFCAB2	Q5VUJ9	269 aa		11.93	□□□□□ -0.5
MYB-238	ENST00000534044	ABCA9	Q8IUA7	1624 aa		11.92	□□□□□ -0.5
MYB-238	ENST00000534044	MYO5C	Q9NQX4	1742 aa		11.92	□□□□□ -0.5
MYB-238	ENST00000534044	PREX2	Q70Z35	1606 aa		11.92	□□□□□ -0.5
MYB-238	ENST00000534044	ARHGAP5	Q13017	1502 aa		11.92	□□□□□ -0.5
MYB-238	ENST00000534044	FAM69C	Q0P6D2	419 aa		11.91	□□□□□ -0.5
MYB-238	ENST00000534044	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
MYB-238	ENST00000534044	CAMSAP2	Q08AD1	1489 aa		11.9	□□□□□ -0.5
MYB-238	ENST00000534044	CD109	Q6YHK3	1445 aa		11.9	□□□□□ -0.5
MYB-238	ENST00000534044	CHIC2	Q9UKJ5	165 aa		11.9	□□□□□ -0.5
MYB-238	ENST00000534044	PTPRK	Q15262	1439 aa		11.89	□□□□□ -0.51
MYB-238	ENST00000534044	ARAP3	Q8WWN8	1544 aa		11.87	□□□□□ -0.51
MYB-238	ENST00000534044	FANCA	O15360	1455 aa		11.87	□□□□□ -0.51
MYB-238	ENST00000534044	SAMD9L	Q8IVG5	1584 aa		11.87	□□□□□ -0.51
MYB-238	ENST00000534044	ABCC5	O15440	1437 aa		11.86	□□□□□ -0.51
MYB-238	ENST00000534044	DAPK1	P53355	1430 aa		11.86	□□□□□ -0.51
MYB-238	ENST00000534044	TSPY4	P0CV99	314 aa		11.86	□□□□□ -0.51
MYB-238	ENST00000534044	TSPY10	P0CW01	314 aa		11.86	□□□□□ -0.51
MYB-238	ENST00000534044	RSPH4A	Q5TD94	716 aa		11.86	□□□□□ -0.51
MYB-238	ENST00000534044	RRP7BP	Q9NSQ0	103 aa		11.85	□□□□□ -0.51
MYB-238	ENST00000534044	MBD5	Q9P267	1494 aa		11.85	□□□□□ -0.51
MYB-238	ENST00000534044	GLI2	P10070	1586 aa		11.85	□□□□□ -0.51
MYB-238	ENST00000534044	DIP2B	Q9P265	1576 aa		11.85	□□□□□ -0.51
MYB-238	ENST00000534044	DNMT1	P26358	1616 aa	Known RBP	11.85	□□□□□ -0.51
MYB-238	ENST00000534044	KIAA1107	Q9UPP5	1409 aa		11.85	□□□□□ -0.51
MYB-238	ENST00000534044	PLEKHH2	Q8IVE3	1493 aa		11.84	□□□□□ -0.51
MYB-238	ENST00000534044	SYCP2	Q9BX26	1530 aa		11.83	□□□□□ -0.52
MYB-238	ENST00000534044	ARHGEF12	Q9NZN5	1544 aa		11.83	□□□□□ -0.52
MYB-238	ENST00000534044	AKNA	Q7Z591	1439 aa		11.83	□□□□□ -0.52
MYB-238	ENST00000534044	MAP3K4	Q9Y6R4	1608 aa		11.82	□□□□□ -0.52
MYB-238	ENST00000534044	AFAP1	Q8N556	730 aa		11.82	□□□□□ -0.52
MYB-238	ENST00000534044	SCAPER	Q9BY12	1400 aa		11.81	□□□□□ -0.52
MYB-238	ENST00000534044	SETD5	Q9C0A6	1442 aa		11.81	□□□□□ -0.52
MYB-238	ENST00000534044	ARHGEF5	Q12774	1597 aa		11.81	□□□□□ -0.52
MYB-238	ENST00000534044	KIF13A	Q9H1H9	1805 aa		11.81	□□□□□ -0.52
MYB-238	ENST00000534044	ADGRL1	O94910	1474 aa		11.81	□□□□□ -0.52
MYB-238	ENST00000534044	CCDC141	Q6ZP82	1450 aa		11.81	□□□□□ -0.52
MYB-238	ENST00000534044	TSPOAP1	O95153	1857 aa		11.81	□□□□□ -0.52
MYB-238	ENST00000534044	TRAPPC8	Q9Y2L5	1435 aa		11.8	□□□□□ -0.52
MYB-238	ENST00000534044	ABCC1	P33527	1531 aa		11.8	□□□□□ -0.52
MYB-238	ENST00000534044	ROCK1	Q13464	1354 aa		11.8	□□□□□ -0.52
MYB-238	ENST00000534044	RAB3GAP2	Q9H2M9	1393 aa		11.8	□□□□□ -0.52
MYB-238	ENST00000534044	HFM1	A2PYH4	1435 aa		11.8	□□□□□ -0.52
MYB-238	ENST00000534044	TRH	P20396	242 aa	Predicted RBP	11.79	□□□□□ -0.52
MYB-238	ENST00000534044	NAIP	Q13075	1403 aa		11.79	□□□□□ -0.52
MYB-238	ENST00000534044	NCOA1	Q15788	1441 aa		11.79	□□□□□ -0.52
MYB-238	ENST00000534044	C9orf84	Q5VXU9	1444 aa		11.79	□□□□□ -0.52
MYB-238	ENST00000534044	ANKRD30A	Q9BXX3	1397 aa		11.78	□□□□□ -0.52
MYB-238	ENST00000534044	NEO1	Q92859	1461 aa		11.78	□□□□□ -0.52
MYB-238	ENST00000534044	CROCC2	H7BZ55	1655 aa		11.78	□□□□□ -0.52
MYB-238	ENST00000534044	HRC	P23327	699 aa		11.77	□□□□□ -0.52
MYB-238	ENST00000534044	SHANK2	Q9UPX8	1470 aa		11.77	□□□□□ -0.53
MYB-238	ENST00000534044	SPAG9	O60271	1321 aa	Known RBP	11.76	□□□□□ -0.53
MYB-238	ENST00000534044	CFAP74	Q9C0B2	1584 aa		11.76	□□□□□ -0.53
MYB-238	ENST00000534044	RAPGEF3	O95398	923 aa		11.76	□□□□□ -0.53
MYB-238	ENST00000534044	CCER1	Q8TC90	406 aa	Predicted RBP	11.76	□□□□□ -0.53
MYB-238	ENST00000534044	MYT1L	Q9UL68	1186 aa		11.76	□□□□□ -0.53
MYB-238	ENST00000534044	ADGRL2	O95490	1459 aa		11.75	□□□□□ -0.53
MYB-238	ENST00000534044	PPRC1	Q5VV67	1664 aa	Known RBP	11.75	□□□□□ -0.53
MYB-238	ENST00000534044	TEX14	Q8IWB6	1497 aa		11.75	□□□□□ -0.53
MYB-238	ENST00000534044	ADGB	Q8N7X0	1667 aa		11.74	□□□□□ -0.53
MYB-238	ENST00000534044	ZNF518A	Q6AHZ1	1483 aa		11.73	□□□□□ -0.53
MYB-238	ENST00000534044	DENND4B	O75064	1496 aa	Predicted RBP	11.73	□□□□□ -0.53
MYB-238	ENST00000534044	KIF15	Q9NS87	1388 aa		11.73	□□□□□ -0.53
MYB-238	ENST00000534044	MAST1	Q9Y2H9	1570 aa		11.72	□□□□□ -0.53
MYB-238	ENST00000534044	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.72	□□□□□ -0.53
MYB-238	ENST00000534044	TRIM52	Q96A61	297 aa		11.72	□□□□□ -0.53
MYB-238	ENST00000534044	GCC2	Q8IWJ2	1684 aa		11.72	□□□□□ -0.53
MYB-238	ENST00000534044	POGZ	Q7Z3K3	1410 aa		11.71	□□□□□ -0.53
MYB-238	ENST00000534044	ANKRD50	Q9ULJ7	1429 aa		11.71	□□□□□ -0.53
MYB-238	ENST00000534044	KDM6B	O15054	1643 aa		11.71	□□□□□ -0.54
MYB-238	ENST00000534044	SENP3	Q9H4L4	574 aa	Predicted RBP	11.7	□□□□□ -0.54
MYB-238	ENST00000534044	DHX57	Q6P158	1386 aa	Known RBP	11.69	□□□□□ -0.54
MYB-238	ENST00000534044	ATP7A	Q04656	1500 aa		11.69	□□□□□ -0.54
MYB-238	ENST00000534044	ZFYVE16	Q7Z3T8	1539 aa		11.68	□□□□□ -0.54
MYB-238	ENST00000534044	PLXNC1	O60486	1568 aa		11.68	□□□□□ -0.54
MYB-238	ENST00000534044	KDM5C	P41229	1560 aa		11.68	□□□□□ -0.54
MYB-238	ENST00000534044	ACIN1	Q9UKV3	1341 aa	Known RBP	11.68	□□□□□ -0.54
MYB-238	ENST00000534044	MLH3	Q9UHC1	1453 aa		11.67	□□□□□ -0.54
MYB-238	ENST00000534044	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.67	□□□□□ -0.54
MYB-238	ENST00000534044	KIDINS220	Q9ULH0	1771 aa		11.67	□□□□□ -0.54
MYB-238	ENST00000534044	RICTOR	Q6R327	1708 aa		11.67	□□□□□ -0.54
MYB-238	ENST00000534044	INO80	Q9ULG1	1556 aa	Predicted RBP	11.67	□□□□□ -0.54
MYB-238	ENST00000534044	DUOX2	Q9NRD8	1548 aa		11.66	□□□□□ -0.54
MYB-238	ENST00000534044	DHX29	Q7Z478	1369 aa	Known RBP	11.65	□□□□□ -0.54
MYB-238	ENST00000534044	MPHOSPH9	Q99550	1183 aa		11.65	□□□□□ -0.55
MYB-238	ENST00000534044	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.64	□□□□□ -0.55	4e-8	■□□□□ 9.4
MYB-238	ENST00000534044	HECW2	Q9P2P5	1572 aa		11.64	□□□□□ -0.55
MYB-238	ENST00000534044	FRMPD1	Q5SYB0	1578 aa		11.63	□□□□□ -0.55
MYB-238	ENST00000534044	ERBIN	Q96RT1	1412 aa		11.63	□□□□□ -0.55
MYB-238	ENST00000534044	KIF3B	O15066	747 aa		11.63	□□□□□ -0.55
MYB-238	ENST00000534044	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.63	□□□□□ -0.55
MYB-238	ENST00000534044	NUP155	O75694	1391 aa		11.63	□□□□□ -0.55
MYB-238	ENST00000534044	YEATS2	Q9ULM3	1422 aa		11.62	□□□□□ -0.55
MYB-238	ENST00000534044	A2M	P01023	1474 aa		11.61	□□□□□ -0.55
MYB-238	ENST00000534044	CLSPN	Q9HAW4	1339 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms