RNA–Protein interactions for RNA: ENST00000533928.1

USP33-218, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-218ENST00000533928 HS3ST6Q96QI5 342 aa9.15□□□□□ -0.94
USP33-218ENST00000533928 FBXO22Q8NEZ5 403 aa9.14□□□□□ -0.95
USP33-218ENST00000533928 RGL2O15211 777 aa9.13□□□□□ -0.95
USP33-218ENST00000533928 HOXB1P14653 301 aaPredicted RBP9.13□□□□□ -0.95
USP33-218ENST00000533928 SPNS2Q8IVW8 549 aa9.12□□□□□ -0.95
USP33-218ENST00000533928 RIMBP2O15034 1052 aa9.11□□□□□ -0.95
USP33-218ENST00000533928 MFRPQ9BY79 579 aa9.11□□□□□ -0.95
USP33-218ENST00000533928 ERBB3P21860 1342 aa9.08□□□□□ -0.96
USP33-218ENST00000533928 MMRN1Q13201 1228 aa9.08□□□□□ -0.96
USP33-218ENST00000533928 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
USP33-218ENST00000533928 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
USP33-218ENST00000533928 ZSWIM6Q9HCJ5 1215 aa9.06□□□□□ -0.96
USP33-218ENST00000533928 GPR153Q6NV75 609 aa9.03□□□□□ -0.96
USP33-218ENST00000533928 VARS2Q5ST30 1063 aaKnown RBP9.02□□□□□ -0.97
USP33-218ENST00000533928 ARSIQ5FYB1 569 aa9□□□□□ -0.97
USP33-218ENST00000533928 C2orf72A6NCS6 295 aa8.99□□□□□ -0.97
USP33-218ENST00000533928 KIF3CO14782 793 aa8.98□□□□□ -0.97
USP33-218ENST00000533928 PPP1R37O75864 691 aa8.96□□□□□ -0.98
USP33-218ENST00000533928 KHSRPQ92945 711 aaKnown RBP eCLIP8.96□□□□□ -0.984e-6■■■□□ 16.6
USP33-218ENST00000533928 ZNF687Q8N1G0 1237 aa8.95□□□□□ -0.98
USP33-218ENST00000533928 TMC2Q8TDI7 906 aa8.95□□□□□ -0.98
USP33-218ENST00000533928 ABCC9O60706 1549 aa8.95□□□□□ -0.98
USP33-218ENST00000533928 HS6ST3Q8IZP7 471 aa8.94□□□□□ -0.98
USP33-218ENST00000533928 ZNF316A6NFI3 1004 aaPredicted RBP8.91□□□□□ -0.98
USP33-218ENST00000533928 CHGAP10645 457 aaKnown RBP8.91□□□□□ -0.98
USP33-218ENST00000533928 SLC34A2O95436 690 aa8.89□□□□□ -0.99
USP33-218ENST00000533928 NUDT7P0C024 238 aa8.88□□□□□ -0.99
USP33-218ENST00000533928 PCDHGA4Q9Y5G9 962 aa8.88□□□□□ -0.99
USP33-218ENST00000533928 MYO15BQ96JP2 1530 aa8.86□□□□□ -0.99
USP33-218ENST00000533928 ANKRD13DQ6ZTN6 518 aa8.84□□□□□ -0.99
USP33-218ENST00000533928 LHX6Q9UPM6 363 aa8.84□□□□□ -0.99
USP33-218ENST00000533928 MYT1LQ9UL68 1186 aa8.83□□□□□ -1
USP33-218ENST00000533928 FOXK1P85037 733 aa8.82□□□□□ -1
USP33-218ENST00000533928 NKX1-1Q15270 411 aaPredicted RBP8.82□□□□□ -1
USP33-218ENST00000533928 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
USP33-218ENST00000533928 DNAJC5Q9H3Z4 198 aa8.82□□□□□ -1
USP33-218ENST00000533928 GPHNQ9NQX3 736 aaPredicted RBP8.82□□□□□ -1
USP33-218ENST00000533928 NACADO15069 1562 aa8.82□□□□□ -1
USP33-218ENST00000533928 PLPP6Q8IY26 295 aa8.81□□□□□ -1
USP33-218ENST00000533928 LSM11P83369 360 aaKnown RBP eCLIP8.8□□□□□ -1
USP33-218ENST00000533928 PTCD2Q8WV60 388 aaKnown RBP8.8□□□□□ -1
USP33-218ENST00000533928 RB1CC1Q8TDY2 1594 aa8.8□□□□□ -1
USP33-218ENST00000533928 DSG2Q14126 1118 aa8.79□□□□□ -1
USP33-218ENST00000533928 PBX2P40425 430 aa8.78□□□□□ -1
USP33-218ENST00000533928 PTGER2P43116 358 aa8.78□□□□□ -1
USP33-218ENST00000533928 RYDENQ9NUL5 291 aaKnown RBP8.78□□□□□ -1
USP33-218ENST00000533928 KDM4FA0A1W2PPD8 638 aa8.77□□□□□ -1.01
USP33-218ENST00000533928 POTEEQ6S8J3 1075 aa8.77□□□□□ -1.01
USP33-218ENST00000533928 AXIN2Q9Y2T1 843 aa8.77□□□□□ -1.01
USP33-218ENST00000533928 DCAF1Q9Y4B6 1507 aa8.76□□□□□ -1.01
USP33-218ENST00000533928 PSDA5PKW4 1024 aaPredicted RBP8.75□□□□□ -1.01
USP33-218ENST00000533928 TBC1D12O60347 775 aa8.75□□□□□ -1.01
USP33-218ENST00000533928 ARHGAP33O14559 1287 aa8.72□□□□□ -1.01
USP33-218ENST00000533928 CRISPLD2Q9H0B8 497 aa8.71□□□□□ -1.02
USP33-218ENST00000533928 GTPBP6O43824 516 aaPredicted RBP8.69□□□□□ -1.02
USP33-218ENST00000533928 DCAF8L2P0C7V8 631 aa8.69□□□□□ -1.02
USP33-218ENST00000533928 ZCCHC6Q5VYS8 1495 aaKnown RBP8.69□□□□□ -1.02
USP33-218ENST00000533928 PDE4AP27815 886 aa8.68□□□□□ -1.02
USP33-218ENST00000533928 PPP4R3BQ5MIZ7 849 aa8.68□□□□□ -1.02
USP33-218ENST00000533928 PPP1R15BQ5SWA1 713 aa8.68□□□□□ -1.02
USP33-218ENST00000533928 OXER1Q8TDS5 423 aa8.68□□□□□ -1.02
USP33-218ENST00000533928 UPF1Q92900 1129 aaKnown RBP eCLIP8.68□□□□□ -1.02
USP33-218ENST00000533928 ADGRD1Q6QNK2 874 aa8.67□□□□□ -1.02
USP33-218ENST00000533928 NCKAP5LQ9HCH0 1330 aa8.66□□□□□ -1.02
USP33-218ENST00000533928 PSEN2P49810 448 aa8.66□□□□□ -1.02
USP33-218ENST00000533928 DMRTA1Q5VZB9 504 aa8.65□□□□□ -1.02
USP33-218ENST00000533928 SHROOM4Q9ULL8 1493 aa8.64□□□□□ -1.03
USP33-218ENST00000533928 TK2O00142 265 aa8.63□□□□□ -1.03
USP33-218ENST00000533928 LARP6Q9BRS8 491 aaKnown RBP8.63□□□□□ -1.03
USP33-218ENST00000533928 KCNK17Q96T54 332 aa8.61□□□□□ -1.03
USP33-218ENST00000533928 HRO43593 1189 aa8.6□□□□□ -1.03
USP33-218ENST00000533928 ZNF454Q8N9F8 522 aa8.6□□□□□ -1.03
USP33-218ENST00000533928 DDX27Q96GQ7 796 aaKnown RBP8.6□□□□□ -1.03
USP33-218ENST00000533928 KCNH8Q96L42 1107 aa8.6□□□□□ -1.03
USP33-218ENST00000533928 HCSTQ9UBK5 93 aa8.59□□□□□ -1.03
USP33-218ENST00000533928 STAC3Q96MF2 364 aa8.58□□□□□ -1.04
USP33-218ENST00000533928 ANO8Q9HCE9 1232 aaPredicted RBP8.58□□□□□ -1.04
USP33-218ENST00000533928 EVI5O60447 810 aa8.57□□□□□ -1.04
USP33-218ENST00000533928 FOSBP53539 338 aa8.57□□□□□ -1.04
USP33-218ENST00000533928 AMER1Q5JTC6 1135 aaPredicted RBP8.57□□□□□ -1.04
USP33-218ENST00000533928 MAP3K9P80192 1104 aa8.56□□□□□ -1.04
USP33-218ENST00000533928 MFSD10Q14728 455 aa8.56□□□□□ -1.04
USP33-218ENST00000533928 BCL2L12Q9HB09 334 aa8.56□□□□□ -1.04
USP33-218ENST00000533928 RTN4Q9NQC3 1192 aaKnown RBP8.56□□□□□ -1.04
USP33-218ENST00000533928 VPS9D1Q9Y2B5 631 aa8.55□□□□□ -1.04
USP33-218ENST00000533928 CADPS2Q86UW7 1296 aa8.54□□□□□ -1.04
USP33-218ENST00000533928 UNC13AQ9UPW8 1703 aa8.54□□□□□ -1.04
USP33-218ENST00000533928 PTPREP23469 700 aa8.53□□□□□ -1.04
USP33-218ENST00000533928 KCTD12Q96CX2 325 aaKnown RBP8.53□□□□□ -1.04
USP33-218ENST00000533928 JPH4Q96JJ6 628 aa8.53□□□□□ -1.04
USP33-218ENST00000533928 ZDHHC16Q969W1 377 aa8.52□□□□□ -1.05
USP33-218ENST00000533928 EMILIN3Q9NT22 766 aa8.52□□□□□ -1.05
USP33-218ENST00000533928 PLA2G2EQ9NZK7 142 aa8.52□□□□□ -1.05
USP33-218ENST00000533928 SLC4A5Q9BY07 1137 aa8.51□□□□□ -1.05
USP33-218ENST00000533928 ADAM33Q9BZ11 813 aa8.5□□□□□ -1.05
USP33-218ENST00000533928 ZBED2Q9BTP6 218 aa8.48□□□□□ -1.05
USP33-218ENST00000533928 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
USP33-218ENST00000533928 BHMG1C9JSJ3 638 aaPredicted RBP8.46□□□□□ -1.06
USP33-218ENST00000533928 PCDHGA10Q9Y5H3 936 aa8.46□□□□□ -1.06
USP33-218ENST00000533928 PTPN5P54829 565 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms