RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 ARHGAP5Q13017 1502 aa30.98■■■□□ 2.55
CHEK1-215ENST00000533778 GPATCH8Q9UKJ3 1502 aaKnown RBP30.95■■■□□ 2.55
CHEK1-215ENST00000533778 CFDP1Q9UEE9 299 aaPredicted RBP30.94■■■□□ 2.54
CHEK1-215ENST00000533778 NCOA2Q15596 1464 aa30.92■■■□□ 2.54
CHEK1-215ENST00000533778 DENND4BO75064 1496 aaPredicted RBP30.91■■■□□ 2.54
CHEK1-215ENST00000533778 SUPT6HQ7KZ85 1726 aaKnown RBP30.91■■■□□ 2.54
CHEK1-215ENST00000533778 ADGRL1O94910 1474 aa30.9■■■□□ 2.54
CHEK1-215ENST00000533778 RAPGEF3O95398 923 aa30.9■■■□□ 2.54
CHEK1-215ENST00000533778 PREX2Q70Z35 1606 aa30.9■■■□□ 2.54
CHEK1-215ENST00000533778 SCAPERQ9BY12 1400 aa30.89■■■□□ 2.53
CHEK1-215ENST00000533778 ZNF777Q9ULD5 760 aaPredicted RBP30.87■■■□□ 2.53
CHEK1-215ENST00000533778 CDC42BPAQ5VT25 1732 aa30.84■■■□□ 2.53
CHEK1-215ENST00000533778 CDC42BPBQ9Y5S2 1711 aa30.84■■■□□ 2.53
CHEK1-215ENST00000533778 PLEKHH2Q8IVE3 1493 aa30.79■■■□□ 2.52
CHEK1-215ENST00000533778 POGZQ7Z3K3 1410 aa30.79■■■□□ 2.52
CHEK1-215ENST00000533778 ITSN2Q9NZM3 1697 aa30.78■■■□□ 2.52
CHEK1-215ENST00000533778 KIAA1107Q9UPP5 1409 aa30.75■■■□□ 2.51
CHEK1-215ENST00000533778 ABCC1P33527 1531 aa30.74■■■□□ 2.51
CHEK1-215ENST00000533778 ZNF518AQ6AHZ1 1483 aa30.74■■■□□ 2.51
CHEK1-215ENST00000533778 MYOM3Q5VTT5 1437 aa30.73■■■□□ 2.51
CHEK1-215ENST00000533778 AFAP1Q8N556 730 aa30.72■■■□□ 2.51
CHEK1-215ENST00000533778 FRMPD1Q5SYB0 1578 aa30.71■■■□□ 2.51
CHEK1-215ENST00000533778 SAMD9LQ8IVG5 1584 aa30.71■■■□□ 2.51
CHEK1-215ENST00000533778 MIA2Q96PC5 1412 aa30.71■■■□□ 2.51
CHEK1-215ENST00000533778 HNRNPMP52272 730 aaKnown RBP eCLIP30.7■■■□□ 2.51
CHEK1-215ENST00000533778 ZNF644Q9H582 1327 aaPredicted RBP30.7■■■□□ 2.5
CHEK1-215ENST00000533778 MAGI2Q86UL8 1455 aa30.7■■■□□ 2.5
CHEK1-215ENST00000533778 RICTORQ6R327 1708 aa30.69■■■□□ 2.5
CHEK1-215ENST00000533778 ARHGEF12Q9NZN5 1544 aa30.68■■■□□ 2.5
CHEK1-215ENST00000533778 ZMYM4Q5VZL5 1548 aa30.67■■■□□ 2.5
CHEK1-215ENST00000533778 TRAPPC8Q9Y2L5 1435 aa30.66■■■□□ 2.5
CHEK1-215ENST00000533778 RSPH4AQ5TD94 716 aa30.66■■■□□ 2.5
CHEK1-215ENST00000533778 MYT1LQ9UL68 1186 aa30.66■■■□□ 2.5
CHEK1-215ENST00000533778 SYCP2Q9BX26 1530 aa30.64■■■□□ 2.5
CHEK1-215ENST00000533778 CAMSAP2Q08AD1 1489 aa30.62■■■□□ 2.49
CHEK1-215ENST00000533778 KDM5CP41229 1560 aa30.61■■■□□ 2.49
CHEK1-215ENST00000533778 ZFYVE16Q7Z3T8 1539 aa30.59■■■□□ 2.49
CHEK1-215ENST00000533778 MLH3Q9UHC1 1453 aa30.59■■■□□ 2.49
CHEK1-215ENST00000533778 SPAG9O60271 1321 aaKnown RBP30.59■■■□□ 2.49
CHEK1-215ENST00000533778 MBD5Q9P267 1494 aa30.58■■■□□ 2.49
CHEK1-215ENST00000533778 PPARGC1BQ86YN6 1023 aaKnown RBP30.57■■■□□ 2.48
CHEK1-215ENST00000533778 FGD6Q6ZV73 1430 aa30.56■■■□□ 2.48
CHEK1-215ENST00000533778 YEATS2Q9ULM3 1422 aa30.55■■■□□ 2.48
CHEK1-215ENST00000533778 ARHGEF40Q8TER5 1519 aa30.54■■■□□ 2.48
CHEK1-215ENST00000533778 TSPY4P0CV99 314 aa30.52■■■□□ 2.48
CHEK1-215ENST00000533778 TSPY10P0CW01 314 aa30.52■■■□□ 2.48
CHEK1-215ENST00000533778 HECW2Q9P2P5 1572 aa30.52■■■□□ 2.48
CHEK1-215ENST00000533778 CCDC141Q6ZP82 1450 aa30.51■■■□□ 2.48
CHEK1-215ENST00000533778 ATP10AO60312 1499 aa30.5■■■□□ 2.47
CHEK1-215ENST00000533778 ARID4BQ4LE39 1312 aaPredicted RBP30.48■■■□□ 2.47
CHEK1-215ENST00000533778 ARHGEF5Q12774 1597 aa30.47■■■□□ 2.47
CHEK1-215ENST00000533778 TCOF1Q13428 1488 aaKnown RBP30.46■■■□□ 2.47
CHEK1-215ENST00000533778 PTPN23Q9H3S7 1636 aa30.46■■■□□ 2.47
CHEK1-215ENST00000533778 RTEL1-TNFRSF6BF6WH68 1400 aa30.46■■■□□ 2.47
CHEK1-215ENST00000533778 C9orf84Q5VXU9 1444 aa30.46■■■□□ 2.47
CHEK1-215ENST00000533778 FAM50AQ14320 339 aaKnown RBP30.42■■■□□ 2.46
CHEK1-215ENST00000533778 ATP7AQ04656 1500 aa30.42■■■□□ 2.46
CHEK1-215ENST00000533778 DIP2CQ9Y2E4 1556 aa30.39■■■□□ 2.46
CHEK1-215ENST00000533778 KIDINS220Q9ULH0 1771 aa30.38■■■□□ 2.45
CHEK1-215ENST00000533778 INO80Q9ULG1 1556 aaPredicted RBP30.37■■■□□ 2.45
CHEK1-215ENST00000533778 KDM4FA0A1W2PPD8 638 aa30.36■■■□□ 2.45
CHEK1-215ENST00000533778 ABCA6Q8N139 1617 aa30.35■■■□□ 2.45
CHEK1-215ENST00000533778 REREQ9P2R6 1566 aa30.34■■■□□ 2.45
CHEK1-215ENST00000533778 ABCC5O15440 1437 aa30.34■■■□□ 2.45
CHEK1-215ENST00000533778 DAPK1P53355 1430 aa30.32■■■□□ 2.44
CHEK1-215ENST00000533778 A2MP01023 1474 aa30.31■■■□□ 2.44
CHEK1-215ENST00000533778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.3■■■□□ 2.44
CHEK1-215ENST00000533778 SHANK2Q9UPX8 1470 aa30.3■■■□□ 2.44
CHEK1-215ENST00000533778 MAST1Q9Y2H9 1570 aa30.29■■■□□ 2.44
CHEK1-215ENST00000533778 AGLP35573 1532 aa30.28■■■□□ 2.44
CHEK1-215ENST00000533778 DNMT1P26358 1616 aaKnown RBP30.27■■■□□ 2.44
CHEK1-215ENST00000533778 DHX29Q7Z478 1369 aaKnown RBP30.27■■■□□ 2.44
CHEK1-215ENST00000533778 MLECQ14165 292 aa30.26■■■□□ 2.43
CHEK1-215ENST00000533778 RRBP1Q9P2E9 1410 aaKnown RBP30.24■■■□□ 2.43
CHEK1-215ENST00000533778 AEBP2Q6ZN18 517 aaPredicted RBP30.24■■■□□ 2.43
CHEK1-215ENST00000533778 ADGBQ8N7X0 1667 aa30.21■■■□□ 2.43
CHEK1-215ENST00000533778 ANKRD30AQ9BXX3 1397 aa30.21■■■□□ 2.43
CHEK1-215ENST00000533778 BCORL1Q5H9F3 1711 aa30.21■■■□□ 2.43
CHEK1-215ENST00000533778 CHIC2Q9UKJ5 165 aa30.2■■■□□ 2.43
CHEK1-215ENST00000533778 PLXNC1O60486 1568 aa30.19■■■□□ 2.42
CHEK1-215ENST00000533778 SIGLEC1Q9BZZ2 1709 aa30.19■■■□□ 2.42
CHEK1-215ENST00000533778 RRP7BPQ9NSQ0 103 aa30.18■■■□□ 2.42
CHEK1-215ENST00000533778 CROCC2H7BZ55 1655 aa30.17■■■□□ 2.42
CHEK1-215ENST00000533778 KIF15Q9NS87 1388 aa30.16■■■□□ 2.42
CHEK1-215ENST00000533778 ADAMTSL3P82987 1691 aa30.15■■■□□ 2.42
CHEK1-215ENST00000533778 ESF1Q9H501 851 aaKnown RBP30.15■■■□□ 2.42
CHEK1-215ENST00000533778 KIF3BO15066 747 aa30.14■■■□□ 2.42
CHEK1-215ENST00000533778 ITGAEP38570 1179 aa30.14■■■□□ 2.42
CHEK1-215ENST00000533778 NCOA1Q15788 1441 aa30.13■■■□□ 2.41
CHEK1-215ENST00000533778 PPP6R1Q9UPN7 881 aa30.13■■■□□ 2.41
CHEK1-215ENST00000533778 GGT6Q6P531 493 aa30.12■■■□□ 2.41
CHEK1-215ENST00000533778 ADGRL2O95490 1459 aa30.12■■■□□ 2.41
CHEK1-215ENST00000533778 DUOX2Q9NRD8 1548 aa30.12■■■□□ 2.41
CHEK1-215ENST00000533778 PTPRKQ15262 1439 aa30.08■■■□□ 2.41
CHEK1-215ENST00000533778 ROCK1Q13464 1354 aa30.08■■■□□ 2.41
CHEK1-215ENST00000533778 MADDQ8WXG6 1647 aa30.07■■■□□ 2.4
CHEK1-215ENST00000533778 ERBINQ96RT1 1412 aa30.05■■■□□ 2.4
CHEK1-215ENST00000533778 PTPRMP28827 1452 aa30.05■■■□□ 2.4
CHEK1-215ENST00000533778 CNTLNQ9NXG0 1405 aa30.05■■■□□ 2.4
CHEK1-215ENST00000533778 EIF2AK4Q9P2K8 1649 aaKnown RBP29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms