RNA–Protein interactions for RNA: ENST00000533688.5

PDZD3-213, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 573 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-213ENST00000533688 PLCH2O75038 1416 aa27.18■■□□□ 1.94
PDZD3-213ENST00000533688 SCAPERQ9BY12 1400 aa27.17■■□□□ 1.94
PDZD3-213ENST00000533688 MAGI2Q86UL8 1455 aa27.17■■□□□ 1.94
PDZD3-213ENST00000533688 MYO5CQ9NQX4 1742 aa27.15■■□□□ 1.94
PDZD3-213ENST00000533688 KIF14Q15058 1648 aa27.14■■□□□ 1.94
PDZD3-213ENST00000533688 MLECQ14165 292 aa27.12■■□□□ 1.93
PDZD3-213ENST00000533688 FBXO41Q8TF61 875 aa27.11■■□□□ 1.93
PDZD3-213ENST00000533688 FER1L4A9Z1Z3 1794 aa27.09■■□□□ 1.93
PDZD3-213ENST00000533688 CDK11AQ9UQ88 783 aaPredicted RBP27.08■■□□□ 1.93
PDZD3-213ENST00000533688 HSPA2P54652 639 aa27.07■■□□□ 1.92
PDZD3-213ENST00000533688 EFCAB2Q5VUJ9 269 aa27.06■■□□□ 1.92
PDZD3-213ENST00000533688 ARHGAP5Q13017 1502 aa27.06■■□□□ 1.92
PDZD3-213ENST00000533688 TROQ12816 1431 aaPredicted RBP27.05■■□□□ 1.92
PDZD3-213ENST00000533688 C9orf84Q5VXU9 1444 aa27.05■■□□□ 1.92
PDZD3-213ENST00000533688 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
PDZD3-213ENST00000533688 CLIP1P30622 1438 aa27.04■■□□□ 1.92
PDZD3-213ENST00000533688 ATP10AO60312 1499 aa27.04■■□□□ 1.92
PDZD3-213ENST00000533688 LRRIQ1Q96JM4 1722 aa27.03■■□□□ 1.92
PDZD3-213ENST00000533688 ZNF518AQ6AHZ1 1483 aa27.01■■□□□ 1.91
PDZD3-213ENST00000533688 ARHGEF12Q9NZN5 1544 aa27■■□□□ 1.91
PDZD3-213ENST00000533688 KDM5CP41229 1560 aa26.97■■□□□ 1.91
PDZD3-213ENST00000533688 MYT1LQ9UL68 1186 aa26.94■■□□□ 1.9
PDZD3-213ENST00000533688 AFAP1Q8N556 730 aa26.93■■□□□ 1.9
PDZD3-213ENST00000533688 DIP2CQ9Y2E4 1556 aa26.92■■□□□ 1.9
PDZD3-213ENST00000533688 PREX2Q70Z35 1606 aa26.9■■□□□ 1.9
PDZD3-213ENST00000533688 CDC42BPBQ9Y5S2 1711 aa26.9■■□□□ 1.9
PDZD3-213ENST00000533688 CCDC18Q5T9S5 1454 aa26.9■■□□□ 1.9
PDZD3-213ENST00000533688 PREX1Q8TCU6 1659 aa26.89■■□□□ 1.9
PDZD3-213ENST00000533688 ABCA6Q8N139 1617 aa26.88■■□□□ 1.89
PDZD3-213ENST00000533688 CEBPAP49715 358 aaPredicted RBP26.88■■□□□ 1.89
PDZD3-213ENST00000533688 CASKIN1Q8WXD9 1431 aa26.88■■□□□ 1.89
PDZD3-213ENST00000533688 ABCC1P33527 1531 aa26.87■■□□□ 1.89
PDZD3-213ENST00000533688 REREQ9P2R6 1566 aa26.84■■□□□ 1.89
PDZD3-213ENST00000533688 TRAPPC8Q9Y2L5 1435 aa26.83■■□□□ 1.89
PDZD3-213ENST00000533688 ITSN2Q9NZM3 1697 aa26.83■■□□□ 1.89
PDZD3-213ENST00000533688 MLH3Q9UHC1 1453 aa26.82■■□□□ 1.88
PDZD3-213ENST00000533688 FYCO1Q9BQS8 1478 aa26.8■■□□□ 1.88
PDZD3-213ENST00000533688 UHRF1BP1Q6BDS2 1440 aa26.78■■□□□ 1.88
PDZD3-213ENST00000533688 CDC42BPAQ5VT25 1732 aa26.78■■□□□ 1.88
PDZD3-213ENST00000533688 CERKQ8TCT0 537 aa26.76■■□□□ 1.87
PDZD3-213ENST00000533688 AGLP35573 1532 aa26.74■■□□□ 1.87
PDZD3-213ENST00000533688 C3P01024 1663 aa26.73■■□□□ 1.87
PDZD3-213ENST00000533688 KIDINS220Q9ULH0 1771 aa26.73■■□□□ 1.87
PDZD3-213ENST00000533688 ESF1Q9H501 851 aaKnown RBP26.71■■□□□ 1.87
PDZD3-213ENST00000533688 ZNF777Q9ULD5 760 aaPredicted RBP26.71■■□□□ 1.87
PDZD3-213ENST00000533688 SAMD9LQ8IVG5 1584 aa26.71■■□□□ 1.87
PDZD3-213ENST00000533688 SYCP2Q9BX26 1530 aa26.7■■□□□ 1.87
PDZD3-213ENST00000533688 STRCQ7RTU9 1775 aa26.7■■□□□ 1.86
PDZD3-213ENST00000533688 GPATCH8Q9UKJ3 1502 aaKnown RBP26.65■■□□□ 1.86
PDZD3-213ENST00000533688 DMRT2Q9Y5R5 561 aa26.63■■□□□ 1.85
PDZD3-213ENST00000533688 CNTLNQ9NXG0 1405 aa26.62■■□□□ 1.85
PDZD3-213ENST00000533688 SETD1BQ9UPS6 1966 aaKnown RBP26.6■■□□□ 1.85
PDZD3-213ENST00000533688 SPAG9O60271 1321 aaKnown RBP26.6■■□□□ 1.85
PDZD3-213ENST00000533688 HNRNPMP52272 730 aaKnown RBP eCLIP26.59■■□□□ 1.85
PDZD3-213ENST00000533688 ATP7AQ04656 1500 aa26.59■■□□□ 1.85
PDZD3-213ENST00000533688 SUPT6HQ7KZ85 1726 aaKnown RBP26.58■■□□□ 1.85
PDZD3-213ENST00000533688 INO80Q9ULG1 1556 aaPredicted RBP26.57■■□□□ 1.84
PDZD3-213ENST00000533688 CCNB3Q8WWL7 1395 aa26.57■■□□□ 1.84
PDZD3-213ENST00000533688 MROH2AA6NES4 1674 aa26.55■■□□□ 1.84
PDZD3-213ENST00000533688 CFDP1Q9UEE9 299 aaPredicted RBP26.55■■□□□ 1.84
PDZD3-213ENST00000533688 MTUS2Q5JR59 1369 aa26.55■■□□□ 1.84
PDZD3-213ENST00000533688 PLEKHH2Q8IVE3 1493 aa26.55■■□□□ 1.84
PDZD3-213ENST00000533688 PTPRTO14522 1441 aa26.54■■□□□ 1.84
PDZD3-213ENST00000533688 KIAA1107Q9UPP5 1409 aa26.53■■□□□ 1.84
PDZD3-213ENST00000533688 PLXNC1O60486 1568 aa26.53■■□□□ 1.84
PDZD3-213ENST00000533688 NCOA1Q15788 1441 aa26.51■■□□□ 1.83
PDZD3-213ENST00000533688 A2MP01023 1474 aa26.5■■□□□ 1.83
PDZD3-213ENST00000533688 NPATQ14207 1427 aa26.5■■□□□ 1.83
PDZD3-213ENST00000533688 CLTCQ00610 1675 aaKnown RBP26.5■■□□□ 1.83
PDZD3-213ENST00000533688 TIAM1Q13009 1591 aa26.49■■□□□ 1.83
PDZD3-213ENST00000533688 ZMYM3Q14202 1370 aa26.48■■□□□ 1.83
PDZD3-213ENST00000533688 CAMSAP1Q5T5Y3 1602 aa26.48■■□□□ 1.83
PDZD3-213ENST00000533688 EHBP1L1Q8N3D4 1523 aa26.46■■□□□ 1.83
PDZD3-213ENST00000533688 MYO3AQ8NEV4 1616 aa26.44■■□□□ 1.82
PDZD3-213ENST00000533688 LTBP4Q8N2S1 1624 aa26.43■■□□□ 1.82
PDZD3-213ENST00000533688 ZNF644Q9H582 1327 aaPredicted RBP26.42■■□□□ 1.82
PDZD3-213ENST00000533688 ADGBQ8N7X0 1667 aa26.42■■□□□ 1.82
PDZD3-213ENST00000533688 GGT6Q6P531 493 aa26.42■■□□□ 1.82
PDZD3-213ENST00000533688 ZNF142P52746 1687 aaPredicted RBP26.4■■□□□ 1.82
PDZD3-213ENST00000533688 PTPRKQ15262 1439 aa26.38■■□□□ 1.81
PDZD3-213ENST00000533688 CEP170BQ9Y4F5 1589 aaPredicted RBP26.37■■□□□ 1.81
PDZD3-213ENST00000533688 MBD5Q9P267 1494 aa26.37■■□□□ 1.81
PDZD3-213ENST00000533688 CEP162Q5TB80 1403 aa26.37■■□□□ 1.81
PDZD3-213ENST00000533688 NCKAP5LQ9HCH0 1330 aa26.36■■□□□ 1.81
PDZD3-213ENST00000533688 DISP3Q9P2K9 1392 aa26.34■■□□□ 1.81
PDZD3-213ENST00000533688 IQSEC2Q5JU85 1478 aa26.33■■□□□ 1.81
PDZD3-213ENST00000533688 PLA2R1Q13018 1463 aa26.31■■□□□ 1.8
PDZD3-213ENST00000533688 RTEL1-TNFRSF6BF6WH68 1400 aa26.31■■□□□ 1.8
PDZD3-213ENST00000533688 ZNF335Q9H4Z2 1342 aaPredicted RBP26.29■■□□□ 1.8
PDZD3-213ENST00000533688 CAMSAP2Q08AD1 1489 aa26.29■■□□□ 1.8
PDZD3-213ENST00000533688 NCOA2Q15596 1464 aa26.29■■□□□ 1.8
PDZD3-213ENST00000533688 TCOF1Q13428 1488 aaKnown RBP26.28■■□□□ 1.8
PDZD3-213ENST00000533688 CCDC141Q6ZP82 1450 aa26.28■■□□□ 1.8
PDZD3-213ENST00000533688 DHX29Q7Z478 1369 aaKnown RBP26.27■■□□□ 1.8
PDZD3-213ENST00000533688 SPATA31D1Q6ZQQ2 1576 aa26.26■■□□□ 1.79
PDZD3-213ENST00000533688 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
PDZD3-213ENST00000533688 PKD2Q13563 968 aa26.25■■□□□ 1.79
PDZD3-213ENST00000533688 A2ML1A8K2U0 1454 aa26.23■■□□□ 1.79
PDZD3-213ENST00000533688 KDM5DQ9BY66 1539 aa26.23■■□□□ 1.79
PDZD3-213ENST00000533688 DNMT1P26358 1616 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms