RNA–Protein interactions for RNA: ENST00000533559.5

FNTA-213, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-213ENST00000533559 MADDQ8WXG6 1647 aa11.5□□□□□ -0.57
FNTA-213ENST00000533559 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
FNTA-213ENST00000533559 PTPRMP28827 1452 aa11.48□□□□□ -0.57
FNTA-213ENST00000533559 RIMS1Q86UR5 1692 aaKnown RBP11.47□□□□□ -0.57
FNTA-213ENST00000533559 ATP10BO94823 1461 aa11.47□□□□□ -0.57
FNTA-213ENST00000533559 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
FNTA-213ENST00000533559 ARID3CA6NKF2 412 aa11.47□□□□□ -0.57
FNTA-213ENST00000533559 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
FNTA-213ENST00000533559 EFCAB5A4FU69 1503 aa11.46□□□□□ -0.57
FNTA-213ENST00000533559 ARHGEF40Q8TER5 1519 aa11.46□□□□□ -0.57
FNTA-213ENST00000533559 RANGAP1P46060 587 aaPredicted RBP11.46□□□□□ -0.57
FNTA-213ENST00000533559 RICTORQ6R327 1708 aa11.46□□□□□ -0.58
FNTA-213ENST00000533559 PCF11O94913 1555 aaKnown RBP11.45□□□□□ -0.58
FNTA-213ENST00000533559 RRBP1Q9P2E9 1410 aaKnown RBP11.45□□□□□ -0.58
FNTA-213ENST00000533559 ZBTB22O15209 634 aa11.45□□□□□ -0.58
FNTA-213ENST00000533559 U3KPZ7 1027 aaPredicted RBP11.45□□□□□ -0.58
FNTA-213ENST00000533559 NEO1Q92859 1461 aa11.44□□□□□ -0.58
FNTA-213ENST00000533559 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
FNTA-213ENST00000533559 CFAP74Q9C0B2 1584 aa11.43□□□□□ -0.58
FNTA-213ENST00000533559 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
FNTA-213ENST00000533559 FBXO41Q8TF61 875 aa11.42□□□□□ -0.58
FNTA-213ENST00000533559 LMTK3Q96Q04 1460 aa11.42□□□□□ -0.58
FNTA-213ENST00000533559 PHLDB1Q86UU1 1377 aa11.41□□□□□ -0.58
FNTA-213ENST00000533559 SIGLEC1Q9BZZ2 1709 aa11.41□□□□□ -0.58
FNTA-213ENST00000533559 CCNB3Q8WWL7 1395 aa11.41□□□□□ -0.58
FNTA-213ENST00000533559 NUP153P49790 1475 aaKnown RBP11.4□□□□□ -0.58
FNTA-213ENST00000533559 ZNF316A6NFI3 1004 aaPredicted RBP11.4□□□□□ -0.58
FNTA-213ENST00000533559 RAPGEF3O95398 923 aa11.4□□□□□ -0.58
FNTA-213ENST00000533559 FER1L4A9Z1Z3 1794 aa11.39□□□□□ -0.59
FNTA-213ENST00000533559 C1QBPQ07021 282 aaKnown RBP11.39□□□□□ -0.59
FNTA-213ENST00000533559 TIAM1Q13009 1591 aa11.39□□□□□ -0.59
FNTA-213ENST00000533559 DIEXFQ68CQ4 756 aaKnown RBP11.39□□□□□ -0.59
FNTA-213ENST00000533559 TTC37Q6PGP7 1564 aa11.39□□□□□ -0.59
FNTA-213ENST00000533559 FMN1Q68DA7 1419 aa11.38□□□□□ -0.59
FNTA-213ENST00000533559 FYCO1Q9BQS8 1478 aa11.38□□□□□ -0.59
FNTA-213ENST00000533559 ZMYM4Q5VZL5 1548 aa11.37□□□□□ -0.59
FNTA-213ENST00000533559 ARID4BQ4LE39 1312 aaPredicted RBP11.36□□□□□ -0.59
FNTA-213ENST00000533559 CENPBP07199 599 aaPredicted RBP11.36□□□□□ -0.59
FNTA-213ENST00000533559 FHOD3Q2V2M9 1422 aa11.35□□□□□ -0.59
FNTA-213ENST00000533559 ZFYVE16Q7Z3T8 1539 aa11.35□□□□□ -0.59
FNTA-213ENST00000533559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.35□□□□□ -0.597e-9■■■■■ 39
FNTA-213ENST00000533559 MYCNP04198 464 aaPredicted RBP11.35□□□□□ -0.59
FNTA-213ENST00000533559 FANCAO15360 1455 aa11.35□□□□□ -0.59
FNTA-213ENST00000533559 DENND4BO75064 1496 aaPredicted RBP11.35□□□□□ -0.59
FNTA-213ENST00000533559 LRRC9Q6ZRR7 1453 aa11.35□□□□□ -0.59
FNTA-213ENST00000533559 CASKIN1Q8WXD9 1431 aa11.35□□□□□ -0.59
FNTA-213ENST00000533559 KANK4Q5T7N3 995 aaPredicted RBP11.34□□□□□ -0.59
FNTA-213ENST00000533559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.33□□□□□ -0.6
FNTA-213ENST00000533559 AKNAQ7Z591 1439 aa11.33□□□□□ -0.6
FNTA-213ENST00000533559 HECW1Q76N89 1606 aa11.32□□□□□ -0.6
FNTA-213ENST00000533559 PREX1Q8TCU6 1659 aa11.32□□□□□ -0.6
FNTA-213ENST00000533559 MYO5CQ9NQX4 1742 aa11.32□□□□□ -0.6
FNTA-213ENST00000533559 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
FNTA-213ENST00000533559 YEATS2Q9ULM3 1422 aa11.31□□□□□ -0.6
FNTA-213ENST00000533559 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
FNTA-213ENST00000533559 POGZQ7Z3K3 1410 aa11.3□□□□□ -0.6
FNTA-213ENST00000533559 HSPA2P54652 639 aa11.29□□□□□ -0.6
FNTA-213ENST00000533559 DHX57Q6P158 1386 aaKnown RBP11.28□□□□□ -0.6
FNTA-213ENST00000533559 ACIN1Q9UKV3 1341 aaKnown RBP11.28□□□□□ -0.6
FNTA-213ENST00000533559 MAGI2Q86UL8 1455 aa11.27□□□□□ -0.6
FNTA-213ENST00000533559 ARHGEF12Q9NZN5 1544 aa11.26□□□□□ -0.61
FNTA-213ENST00000533559 TIMELESSQ9UNS1 1208 aa11.26□□□□□ -0.61
FNTA-213ENST00000533559 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
FNTA-213ENST00000533559 KIF14Q15058 1648 aa11.25□□□□□ -0.61
FNTA-213ENST00000533559 PLEKHD1A6NEE1 506 aa11.25□□□□□ -0.61
FNTA-213ENST00000533559 STRCQ7RTU9 1775 aa11.24□□□□□ -0.61
FNTA-213ENST00000533559 MLECQ14165 292 aa11.24□□□□□ -0.61
FNTA-213ENST00000533559 SAMD1Q6SPF0 538 aaPredicted RBP11.24□□□□□ -0.61
FNTA-213ENST00000533559 CCDC18Q5T9S5 1454 aa11.24□□□□□ -0.61
FNTA-213ENST00000533559 LRRIQ1Q96JM4 1722 aa11.23□□□□□ -0.61
FNTA-213ENST00000533559 ATP1B4Q9UN42 357 aaPredicted RBP11.23□□□□□ -0.61
FNTA-213ENST00000533559 C9orf84Q5VXU9 1444 aa11.23□□□□□ -0.61
FNTA-213ENST00000533559 MTUS2Q5JR59 1369 aa11.22□□□□□ -0.61
FNTA-213ENST00000533559 SCAPERQ9BY12 1400 aa11.22□□□□□ -0.61
FNTA-213ENST00000533559 C3P01024 1663 aa11.21□□□□□ -0.61
FNTA-213ENST00000533559 KDM5CP41229 1560 aa11.21□□□□□ -0.61
FNTA-213ENST00000533559 ATP10AO60312 1499 aa11.21□□□□□ -0.61
FNTA-213ENST00000533559 PLCH2O75038 1416 aa11.21□□□□□ -0.61
FNTA-213ENST00000533559 ABCA6Q8N139 1617 aa11.2□□□□□ -0.62
FNTA-213ENST00000533559 DIP2CQ9Y2E4 1556 aa11.2□□□□□ -0.62
FNTA-213ENST00000533559 RAB3GAP2Q9H2M9 1393 aa11.2□□□□□ -0.62
FNTA-213ENST00000533559 FAM50AQ14320 339 aaKnown RBP11.2□□□□□ -0.62
FNTA-213ENST00000533559 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
FNTA-213ENST00000533559 ARHGAP5Q13017 1502 aa11.19□□□□□ -0.62
FNTA-213ENST00000533559 EHBP1L1Q8N3D4 1523 aa11.19□□□□□ -0.62
FNTA-213ENST00000533559 CDC42BPBQ9Y5S2 1711 aa11.19□□□□□ -0.62
FNTA-213ENST00000533559 ZNF518AQ6AHZ1 1483 aa11.19□□□□□ -0.62
FNTA-213ENST00000533559 ITSN2Q9NZM3 1697 aa11.18□□□□□ -0.62
FNTA-213ENST00000533559 PREX2Q70Z35 1606 aa11.17□□□□□ -0.62
FNTA-213ENST00000533559 SPATA31D1Q6ZQQ2 1576 aa11.17□□□□□ -0.62
FNTA-213ENST00000533559 REREQ9P2R6 1566 aa11.17□□□□□ -0.62
FNTA-213ENST00000533559 ITGAEP38570 1179 aa11.17□□□□□ -0.62
FNTA-213ENST00000533559 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
FNTA-213ENST00000533559 SUPT6HQ7KZ85 1726 aaKnown RBP11.17□□□□□ -0.62
FNTA-213ENST00000533559 UHRF1BP1Q6BDS2 1440 aa11.17□□□□□ -0.62
FNTA-213ENST00000533559 FGD6Q6ZV73 1430 aa11.17□□□□□ -0.62
FNTA-213ENST00000533559 PELP1Q8IZL8 1130 aaKnown RBP11.15□□□□□ -0.62
FNTA-213ENST00000533559 ABCC1P33527 1531 aa11.14□□□□□ -0.63
FNTA-213ENST00000533559 SETD1BQ9UPS6 1966 aaKnown RBP11.14□□□□□ -0.63
FNTA-213ENST00000533559 CEBPAP49715 358 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms