RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 HTATSF1O43719 755 aaKnown RBP22.39■■□□□ 1.17
PAX6-228ENST00000533333 HDGFP51858 240 aaKnown RBP22.39■■□□□ 1.17
PAX6-228ENST00000533333 CCDC9Q9Y3X0 531 aaKnown RBP22.39■■□□□ 1.17
PAX6-228ENST00000533333 GOLGA6L1Q8N7Z2 621 aa22.38■■□□□ 1.17
PAX6-228ENST00000533333 GORABQ5T7V8 394 aa22.37■■□□□ 1.17
PAX6-228ENST00000533333 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
PAX6-228ENST00000533333 CREBRFQ8IUR6 639 aa22.37■■□□□ 1.17
PAX6-228ENST00000533333 VPS53Q5VIR6 699 aa22.34■■□□□ 1.17
PAX6-228ENST00000533333 PAK3O75914 559 aaPredicted RBP22.34■■□□□ 1.17
PAX6-228ENST00000533333 CHMP3Q9Y3E7 222 aa22.33■■□□□ 1.17
PAX6-228ENST00000533333 SAFB2Q14151 953 aaKnown RBP eCLIP22.33■■□□□ 1.17
PAX6-228ENST00000533333 CCDC34Q96HJ3 373 aa22.33■■□□□ 1.16
PAX6-228ENST00000533333 TAF7LQ5H9L4 462 aa22.32■■□□□ 1.16
PAX6-228ENST00000533333 MORC1Q86VD1 984 aa22.31■■□□□ 1.16
PAX6-228ENST00000533333 FBXO3Q9UK99 471 aa22.31■■□□□ 1.16
PAX6-228ENST00000533333 TMF1P82094 1093 aa22.29■■□□□ 1.16
PAX6-228ENST00000533333 MARCH6O60337 910 aa22.29■■□□□ 1.16
PAX6-228ENST00000533333 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.28■■□□□ 1.16
PAX6-228ENST00000533333 B4GALNT3Q6L9W6 998 aa22.27■■□□□ 1.16
PAX6-228ENST00000533333 GBP4Q96PP9 640 aa22.27■■□□□ 1.16
PAX6-228ENST00000533333 WWC1Q8IX03 1113 aa22.26■■□□□ 1.15
PAX6-228ENST00000533333 CCDC180Q9P1Z9 1646 aa22.25■■□□□ 1.15
PAX6-228ENST00000533333 PTMSP20962 102 aa22.25■■□□□ 1.15
PAX6-228ENST00000533333 SYAP1Q96A49 352 aaPredicted RBP22.24■■□□□ 1.15
PAX6-228ENST00000533333 IPO8O15397 1037 aaKnown RBP22.23■■□□□ 1.15
PAX6-228ENST00000533333 TPM3P06753 285 aa22.22■■□□□ 1.15
PAX6-228ENST00000533333 GZF1Q9H116 711 aaPredicted RBP22.22■■□□□ 1.15
PAX6-228ENST00000533333 GPATCH3Q96I76 525 aa22.21■■□□□ 1.15
PAX6-228ENST00000533333 TOMM22Q9NS69 142 aa22.21■■□□□ 1.15
PAX6-228ENST00000533333 KANK1Q14678 1352 aa22.21■■□□□ 1.15
PAX6-228ENST00000533333 STK26Q9P289 416 aa22.2■■□□□ 1.15
PAX6-228ENST00000533333 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
PAX6-228ENST00000533333 FRAT2O75474 233 aaPredicted RBP22.2■■□□□ 1.14
PAX6-228ENST00000533333 HDGFL2Q7Z4V5 671 aaPredicted RBP22.2■■□□□ 1.14
PAX6-228ENST00000533333 CLIP1P30622 1438 aa22.2■■□□□ 1.14
PAX6-228ENST00000533333 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
PAX6-228ENST00000533333 ITPRIPQ8IWB1 547 aa22.18■■□□□ 1.14
PAX6-228ENST00000533333 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
PAX6-228ENST00000533333 PES1O00541 588 aaKnown RBP22.16■■□□□ 1.14
PAX6-228ENST00000533333 TRIM6-TRIM34B2RNG4 842 aa22.16■■□□□ 1.14
PAX6-228ENST00000533333 DCAF11Q8TEB1 546 aa22.16■■□□□ 1.14
PAX6-228ENST00000533333 GTF2E1P29083 439 aaPredicted RBP22.14■■□□□ 1.14
PAX6-228ENST00000533333 CNKSR2Q8WXI2 1034 aa22.14■■□□□ 1.13
PAX6-228ENST00000533333 CALD1Q05682 793 aaKnown RBP22.14■■□□□ 1.13
PAX6-228ENST00000533333 STK31Q9BXU1 1019 aa22.13■■□□□ 1.13
PAX6-228ENST00000533333 CSPP1Q1MSJ5 1256 aa22.12■■□□□ 1.13
PAX6-228ENST00000533333 PATL2C9JE40 543 aaKnown RBP22.11■■□□□ 1.13
PAX6-228ENST00000533333 NOL8Q76FK4 1167 aaKnown RBP22.11■■□□□ 1.13
PAX6-228ENST00000533333 DEKP35659 375 aaKnown RBP22.1■■□□□ 1.13
PAX6-228ENST00000533333 TPD52L1Q16890 204 aaPredicted RBP22.1■■□□□ 1.13
PAX6-228ENST00000533333 SETQ01105 290 aaPredicted RBP22.1■■□□□ 1.13
PAX6-228ENST00000533333 SLKQ9H2G2 1235 aaPredicted RBP22.1■■□□□ 1.13
PAX6-228ENST00000533333 RWDD1Q9H446 243 aaPredicted RBP22.08■■□□□ 1.13
PAX6-228ENST00000533333 SPAG9O60271 1321 aaKnown RBP22.08■■□□□ 1.13
PAX6-228ENST00000533333 CHMP4AQ9BY43 222 aa22.08■■□□□ 1.12
PAX6-228ENST00000533333 TCEAL9Q9UHQ7 104 aa22.07■■□□□ 1.12
PAX6-228ENST00000533333 SF3A1Q15459 793 aaKnown RBP22.07■■□□□ 1.12
PAX6-228ENST00000533333 U2AF1L5P0DN76 240 aaPredicted RBP22.07■■□□□ 1.12
PAX6-228ENST00000533333 U2AF1Q01081 240 aaKnown RBP eCLIP22.07■■□□□ 1.12
PAX6-228ENST00000533333 TSR1Q2NL82 804 aaKnown RBP22.05■■□□□ 1.12
PAX6-228ENST00000533333 HDAC5Q9UQL6 1122 aa22.05■■□□□ 1.12
PAX6-228ENST00000533333 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
PAX6-228ENST00000533333 MFAP1P55081 439 aaKnown RBP22.05■■□□□ 1.12
PAX6-228ENST00000533333 SIN3AQ96ST3 1273 aa22.04■■□□□ 1.12
PAX6-228ENST00000533333 CTDP1Q9Y5B0 961 aaPredicted RBP22.04■■□□□ 1.12
PAX6-228ENST00000533333 SLC4A10Q6U841 1118 aa22.03■■□□□ 1.12
PAX6-228ENST00000533333 GGT6Q6P531 493 aa22.03■■□□□ 1.12
PAX6-228ENST00000533333 RAD21O60216 631 aa22.01■■□□□ 1.11
PAX6-228ENST00000533333 HMMRO75330 724 aa22.01■■□□□ 1.11
PAX6-228ENST00000533333 TPM2P07951 284 aa22.01■■□□□ 1.11
PAX6-228ENST00000533333 FOXD4L1Q9NU39 408 aa22.01■■□□□ 1.11
PAX6-228ENST00000533333 MSH5O43196 834 aa22■■□□□ 1.11
PAX6-228ENST00000533333 CCAR2Q8N163 923 aaKnown RBP22■■□□□ 1.11
PAX6-228ENST00000533333 KIF16BQ96L93 1317 aa21.99■■□□□ 1.11
PAX6-228ENST00000533333 GOLGA6L3A6NEY3 463 aa21.99■■□□□ 1.11
PAX6-228ENST00000533333 TRIM34Q9BYJ4 488 aa21.98■■□□□ 1.11
PAX6-228ENST00000533333 KIF3AQ9Y496 699 aa21.98■■□□□ 1.11
PAX6-228ENST00000533333 AKAP17AQ02040 695 aaKnown RBP21.97■■□□□ 1.11
PAX6-228ENST00000533333 FOXD4L5Q5VV16 416 aaPredicted RBP21.96■■□□□ 1.11
PAX6-228ENST00000533333 FOXD4L4Q8WXT5 416 aaPredicted RBP21.96■■□□□ 1.11
PAX6-228ENST00000533333 CCNB3Q8WWL7 1395 aa21.95■■□□□ 1.11
PAX6-228ENST00000533333 H3BQV1 296 aa21.95■■□□□ 1.11
PAX6-228ENST00000533333 IFFO2Q5TF58 517 aa21.95■■□□□ 1.11
PAX6-228ENST00000533333 PHF14O94880 888 aa21.94■■□□□ 1.1
PAX6-228ENST00000533333 CCDC70Q6NSX1 233 aa21.94■■□□□ 1.1
PAX6-228ENST00000533333 TCERG1O14776 1098 aaKnown RBP21.94■■□□□ 1.1
PAX6-228ENST00000533333 PMFBP1Q8TBY8 1022 aa21.94■■□□□ 1.1
PAX6-228ENST00000533333 KTN1Q86UP2 1357 aaKnown RBP21.94■■□□□ 1.1
PAX6-228ENST00000533333 CWC22Q9HCG8 908 aaKnown RBP21.94■■□□□ 1.1
PAX6-228ENST00000533333 SMC4Q9NTJ3 1288 aa21.93■■□□□ 1.1
PAX6-228ENST00000533333 TPM1P09493 284 aa21.93■■□□□ 1.1
PAX6-228ENST00000533333 CALRP27797 417 aaKnown RBP21.92■■□□□ 1.1
PAX6-228ENST00000533333 PCMTD1Q96MG8 357 aaPredicted RBP21.92■■□□□ 1.1
PAX6-228ENST00000533333 LTV1Q96GA3 475 aaPredicted RBP21.91■■□□□ 1.1
PAX6-228ENST00000533333 NOL10Q9BSC4 688 aaKnown RBP21.9■■□□□ 1.1
PAX6-228ENST00000533333 FAM184AQ8NB25 1140 aa21.89■■□□□ 1.1
PAX6-228ENST00000533333 AMOTL1Q8IY63 956 aa21.89■■□□□ 1.09
PAX6-228ENST00000533333 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.88■■□□□ 1.09
PAX6-228ENST00000533333 RRP12Q5JTH9 1297 aaKnown RBP21.88■■□□□ 1.09
PAX6-228ENST00000533333 NGDNQ8NEJ9 315 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms