RNA–Protein interactions for RNA: ENST00000533328.5

SERGEF-223, Transcript of secretion regulating guanine nucleotide exchange factor, human

TSL 5

Gene SERGEF, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERGEF-223	ENST00000533328	EHBP1L1	Q8N3D4	1523 aa		33.58	■■■□□ 2.97
SERGEF-223	ENST00000533328	ARHGAP5	Q13017	1502 aa		33.56	■■■□□ 2.96
SERGEF-223	ENST00000533328	DENND4B	O75064	1496 aa	Predicted RBP	33.56	■■■□□ 2.96
SERGEF-223	ENST00000533328	MAP3K1	Q13233	1512 aa		33.53	■■■□□ 2.96
SERGEF-223	ENST00000533328	ADGRL1	O94910	1474 aa		33.53	■■■□□ 2.96
SERGEF-223	ENST00000533328	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.53	■■■□□ 2.96
SERGEF-223	ENST00000533328	SCAPER	Q9BY12	1400 aa		33.5	■■■□□ 2.95
SERGEF-223	ENST00000533328	LRRC9	Q6ZRR7	1453 aa		33.46	■■■□□ 2.95
SERGEF-223	ENST00000533328	POGZ	Q7Z3K3	1410 aa		33.44	■■■□□ 2.94
SERGEF-223	ENST00000533328	ZMYM4	Q5VZL5	1548 aa		33.43	■■■□□ 2.94
SERGEF-223	ENST00000533328	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.43	■■■□□ 2.94
SERGEF-223	ENST00000533328	CCNB3	Q8WWL7	1395 aa		33.41	■■■□□ 2.94
SERGEF-223	ENST00000533328	ABCC1	P33527	1531 aa		33.4	■■■□□ 2.94
SERGEF-223	ENST00000533328	KANK4	Q5T7N3	995 aa	Predicted RBP	33.4	■■■□□ 2.94
SERGEF-223	ENST00000533328	ARHGEF12	Q9NZN5	1544 aa		33.39	■■■□□ 2.94
SERGEF-223	ENST00000533328	NCOA2	Q15596	1464 aa		33.39	■■■□□ 2.94
SERGEF-223	ENST00000533328	SAMD9L	Q8IVG5	1584 aa		33.38	■■■□□ 2.93
SERGEF-223	ENST00000533328	ITSN2	Q9NZM3	1697 aa		33.36	■■■□□ 2.93
SERGEF-223	ENST00000533328	KDM5C	P41229	1560 aa		33.34	■■■□□ 2.93
SERGEF-223	ENST00000533328	ARHGEF40	Q8TER5	1519 aa		33.33	■■■□□ 2.93
SERGEF-223	ENST00000533328	KDM4F	A0A1W2PPD8	638 aa		33.33	■■■□□ 2.93
SERGEF-223	ENST00000533328	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.33	■■■□□ 2.93
SERGEF-223	ENST00000533328	ZNF518A	Q6AHZ1	1483 aa		33.32	■■■□□ 2.92
SERGEF-223	ENST00000533328	MAGI2	Q86UL8	1455 aa		33.32	■■■□□ 2.92
SERGEF-223	ENST00000533328	TRAPPC8	Q9Y2L5	1435 aa		33.3	■■■□□ 2.92
SERGEF-223	ENST00000533328	AFAP1	Q8N556	730 aa		33.3	■■■□□ 2.92
SERGEF-223	ENST00000533328	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.29	■■■□□ 2.92
SERGEF-223	ENST00000533328	YEATS2	Q9ULM3	1422 aa		33.28	■■■□□ 2.92
SERGEF-223	ENST00000533328	ZFYVE16	Q7Z3T8	1539 aa		33.28	■■■□□ 2.92
SERGEF-223	ENST00000533328	KIAA1107	Q9UPP5	1409 aa		33.26	■■■□□ 2.91
SERGEF-223	ENST00000533328	SYCP2	Q9BX26	1530 aa		33.25	■■■□□ 2.91
SERGEF-223	ENST00000533328	APLP2	Q06481	763 aa		33.25	■■■□□ 2.91
SERGEF-223	ENST00000533328	PLEKHH2	Q8IVE3	1493 aa		33.24	■■■□□ 2.91
SERGEF-223	ENST00000533328	ZNF644	Q9H582	1327 aa	Predicted RBP	33.22	■■■□□ 2.91
SERGEF-223	ENST00000533328	MLH3	Q9UHC1	1453 aa		33.21	■■■□□ 2.91
SERGEF-223	ENST00000533328	HECW2	Q9P2P5	1572 aa		33.21	■■■□□ 2.91
SERGEF-223	ENST00000533328	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.2	■■■□□ 2.91	7e-7	■■■□□ 17
SERGEF-223	ENST00000533328	SIGLEC1	Q9BZZ2	1709 aa		33.19	■■■□□ 2.9
SERGEF-223	ENST00000533328	MBD5	Q9P267	1494 aa		33.16	■■■□□ 2.9
SERGEF-223	ENST00000533328	KIDINS220	Q9ULH0	1771 aa		33.16	■■■□□ 2.9
SERGEF-223	ENST00000533328	ATP10A	O60312	1499 aa		33.14	■■■□□ 2.9
SERGEF-223	ENST00000533328	DIP2C	Q9Y2E4	1556 aa		33.13	■■■□□ 2.89
SERGEF-223	ENST00000533328	ABCA6	Q8N139	1617 aa		33.12	■■■□□ 2.89
SERGEF-223	ENST00000533328	CAMSAP2	Q08AD1	1489 aa		33.12	■■■□□ 2.89
SERGEF-223	ENST00000533328	MYOM3	Q5VTT5	1437 aa		33.11	■■■□□ 2.89
SERGEF-223	ENST00000533328	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.11	■■■□□ 2.89
SERGEF-223	ENST00000533328	BCORL1	Q5H9F3	1711 aa		33.1	■■■□□ 2.89
SERGEF-223	ENST00000533328	ADAMTSL3	P82987	1691 aa		33.09	■■■□□ 2.89
SERGEF-223	ENST00000533328	C9orf84	Q5VXU9	1444 aa		33.08	■■■□□ 2.89
SERGEF-223	ENST00000533328	MIA2	Q96PC5	1412 aa		33.07	■■■□□ 2.88
SERGEF-223	ENST00000533328	INO80	Q9ULG1	1556 aa	Predicted RBP	33.06	■■■□□ 2.88
SERGEF-223	ENST00000533328	RERE	Q9P2R6	1566 aa		33.05	■■■□□ 2.88
SERGEF-223	ENST00000533328	SPAG9	O60271	1321 aa	Known RBP	33.03	■■■□□ 2.88
SERGEF-223	ENST00000533328	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.02	■■■□□ 2.88
SERGEF-223	ENST00000533328	MYT1L	Q9UL68	1186 aa		33.02	■■■□□ 2.88
SERGEF-223	ENST00000533328	ATP7A	Q04656	1500 aa		33.02	■■■□□ 2.88
SERGEF-223	ENST00000533328	ARHGEF5	Q12774	1597 aa		33.01	■■■□□ 2.88
SERGEF-223	ENST00000533328	CCDC141	Q6ZP82	1450 aa		32.99	■■■□□ 2.87
SERGEF-223	ENST00000533328	RSPH4A	Q5TD94	716 aa		32.97	■■■□□ 2.87
SERGEF-223	ENST00000533328	MADD	Q8WXG6	1647 aa		32.95	■■■□□ 2.86
SERGEF-223	ENST00000533328	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.94	■■■□□ 2.86
SERGEF-223	ENST00000533328	AGL	P35573	1532 aa		32.93	■■■□□ 2.86
SERGEF-223	ENST00000533328	PTPN23	Q9H3S7	1636 aa		32.93	■■■□□ 2.86
SERGEF-223	ENST00000533328	FGD6	Q6ZV73	1430 aa		32.93	■■■□□ 2.86
SERGEF-223	ENST00000533328	TCOF1	Q13428	1488 aa	Known RBP	32.89	■■■□□ 2.86
SERGEF-223	ENST00000533328	ADGB	Q8N7X0	1667 aa		32.88	■■■□□ 2.85
SERGEF-223	ENST00000533328	PLXNC1	O60486	1568 aa		32.87	■■■□□ 2.85
SERGEF-223	ENST00000533328	MLEC	Q14165	292 aa		32.86	■■■□□ 2.85
SERGEF-223	ENST00000533328	MAST1	Q9Y2H9	1570 aa		32.85	■■■□□ 2.85
SERGEF-223	ENST00000533328	A2M	P01023	1474 aa		32.85	■■■□□ 2.85
SERGEF-223	ENST00000533328	PTPRM	P28827	1452 aa		32.85	■■■□□ 2.85
SERGEF-223	ENST00000533328	RIMS1	Q86UR5	1692 aa	Known RBP	32.85	■■■□□ 2.85
SERGEF-223	ENST00000533328	FER1L4	A9Z1Z3	1794 aa		32.83	■■■□□ 2.85
SERGEF-223	ENST00000533328	TSPY4	P0CV99	314 aa		32.8	■■■□□ 2.84
SERGEF-223	ENST00000533328	TSPY10	P0CW01	314 aa		32.8	■■■□□ 2.84
SERGEF-223	ENST00000533328	ABCC5	O15440	1437 aa		32.78	■■■□□ 2.84
SERGEF-223	ENST00000533328	CROCC2	H7BZ55	1655 aa		32.78	■■■□□ 2.84
SERGEF-223	ENST00000533328	DNMT1	P26358	1616 aa	Known RBP	32.77	■■■□□ 2.84
SERGEF-223	ENST00000533328	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.77	■■■□□ 2.84
SERGEF-223	ENST00000533328	DHX29	Q7Z478	1369 aa	Known RBP	32.75	■■■□□ 2.83
SERGEF-223	ENST00000533328	DAPK1	P53355	1430 aa		32.73	■■■□□ 2.83
SERGEF-223	ENST00000533328	SHANK2	Q9UPX8	1470 aa		32.72	■■■□□ 2.83
SERGEF-223	ENST00000533328	FAM50A	Q14320	339 aa	Known RBP	32.62	■■■□□ 2.81
SERGEF-223	ENST00000533328	C3	P01024	1663 aa		32.58	■■■□□ 2.81
SERGEF-223	ENST00000533328	GGT6	Q6P531	493 aa		32.57	■■■□□ 2.8
SERGEF-223	ENST00000533328	CNTLN	Q9NXG0	1405 aa		32.57	■■■□□ 2.8
SERGEF-223	ENST00000533328	DUOX2	Q9NRD8	1548 aa		32.56	■■■□□ 2.8
SERGEF-223	ENST00000533328	MROH2A	A6NES4	1674 aa		32.56	■■■□□ 2.8
SERGEF-223	ENST00000533328	KIF3B	O15066	747 aa		32.56	■■■□□ 2.8
SERGEF-223	ENST00000533328	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.55	■■■□□ 2.8
SERGEF-223	ENST00000533328	CEBPA	P49715	358 aa	Predicted RBP	32.55	■■■□□ 2.8
SERGEF-223	ENST00000533328	CLTC	Q00610	1675 aa	Known RBP	32.55	■■■□□ 2.8
SERGEF-223	ENST00000533328	PPP6R1	Q9UPN7	881 aa		32.54	■■■□□ 2.8
SERGEF-223	ENST00000533328	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.54	■■■□□ 2.8	2e-9	■■■■■ 39.6
SERGEF-223	ENST00000533328	KIF15	Q9NS87	1388 aa		32.54	■■■□□ 2.8
SERGEF-223	ENST00000533328	ADGRL2	O95490	1459 aa		32.54	■■■□□ 2.8
SERGEF-223	ENST00000533328	PTPRK	Q15262	1439 aa		32.52	■■■□□ 2.8
SERGEF-223	ENST00000533328	NCOA1	Q15788	1441 aa		32.52	■■■□□ 2.8
SERGEF-223	ENST00000533328	PLPPR3	Q6T4P5	718 aa		32.52	■■■□□ 2.8
SERGEF-223	ENST00000533328	CHIC2	Q9UKJ5	165 aa		32.52	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms