RNA–Protein interactions for RNA: ENST00000532781.1

ARID1A-208, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 1 (best)

Gene ARID1A, Length 2,583 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-208ENST00000532781 GCC2Q8IWJ2 1684 aa20.39■□□□□ 0.85
ARID1A-208ENST00000532781 FOXD1Q16676 465 aa20.39■□□□□ 0.85
ARID1A-208ENST00000532781 DNMT1P26358 1616 aaKnown RBP20.37■□□□□ 0.85
ARID1A-208ENST00000532781 UACAQ9BZF9 1416 aa20.37■□□□□ 0.85
ARID1A-208ENST00000532781 CLASP1Q7Z460 1538 aa20.36■□□□□ 0.85
ARID1A-208ENST00000532781 ITSN2Q9NZM3 1697 aa20.36■□□□□ 0.85
ARID1A-208ENST00000532781 ABCC10Q5T3U5 1492 aa20.33■□□□□ 0.85
ARID1A-208ENST00000532781 DENND4BO75064 1496 aaPredicted RBP20.33■□□□□ 0.84
ARID1A-208ENST00000532781 KCNH8Q96L42 1107 aa20.32■□□□□ 0.84
ARID1A-208ENST00000532781 HIRIP3Q9BW71 556 aaPredicted RBP20.31■□□□□ 0.84
ARID1A-208ENST00000532781 HNRNPMP52272 730 aaKnown RBP eCLIP20.29■□□□□ 0.84
ARID1A-208ENST00000532781 MIER1Q8N108 512 aa20.28■□□□□ 0.84
ARID1A-208ENST00000532781 ABCC2Q92887 1545 aa20.26■□□□□ 0.83
ARID1A-208ENST00000532781 TTC37Q6PGP7 1564 aa20.26■□□□□ 0.83
ARID1A-208ENST00000532781 CDC42BPBQ9Y5S2 1711 aa20.26■□□□□ 0.83
ARID1A-208ENST00000532781 AKNAQ7Z591 1439 aa20.26■□□□□ 0.83
ARID1A-208ENST00000532781 MPHOSPH9Q99550 1183 aa20.24■□□□□ 0.83
ARID1A-208ENST00000532781 CROCC2H7BZ55 1655 aa20.24■□□□□ 0.83
ARID1A-208ENST00000532781 ZCCHC11Q5TAX3 1644 aaKnown RBP20.22■□□□□ 0.83
ARID1A-208ENST00000532781 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
ARID1A-208ENST00000532781 NCOA1Q15788 1441 aa20.21■□□□□ 0.83
ARID1A-208ENST00000532781 ROCK1Q13464 1354 aa20.2■□□□□ 0.82
ARID1A-208ENST00000532781 ADGBQ8N7X0 1667 aa20.2■□□□□ 0.82
ARID1A-208ENST00000532781 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.2■□□□□ 0.82
ARID1A-208ENST00000532781 SAMD9LQ8IVG5 1584 aa20.19■□□□□ 0.82
ARID1A-208ENST00000532781 PPP1R15AO75807 674 aaPredicted RBP20.19■□□□□ 0.82
ARID1A-208ENST00000532781 YTHDC1Q96MU7 727 aaKnown RBP20.18■□□□□ 0.82
ARID1A-208ENST00000532781 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
ARID1A-208ENST00000532781 SLC4A1APQ9BWU0 796 aaKnown RBP20.16■□□□□ 0.82
ARID1A-208ENST00000532781 C9orf84Q5VXU9 1444 aa20.15■□□□□ 0.82
ARID1A-208ENST00000532781 ARHGAP5Q13017 1502 aa20.15■□□□□ 0.82
ARID1A-208ENST00000532781 SYCP2Q9BX26 1530 aa20.13■□□□□ 0.81
ARID1A-208ENST00000532781 MBD5Q9P267 1494 aa20.12■□□□□ 0.81
ARID1A-208ENST00000532781 KDM5BQ9UGL1 1544 aa20.12■□□□□ 0.81
ARID1A-208ENST00000532781 ANKRD30AQ9BXX3 1397 aa20.11■□□□□ 0.81
ARID1A-208ENST00000532781 MYO5CQ9NQX4 1742 aa20.1■□□□□ 0.81
ARID1A-208ENST00000532781 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
ARID1A-208ENST00000532781 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
ARID1A-208ENST00000532781 PZPP20742 1482 aa20.1■□□□□ 0.81
ARID1A-208ENST00000532781 ADGRL2O95490 1459 aa20.09■□□□□ 0.81
ARID1A-208ENST00000532781 ANKRD50Q9ULJ7 1429 aa20.09■□□□□ 0.81
ARID1A-208ENST00000532781 OSCARQ8IYS5 282 aa20.07■□□□□ 0.8
ARID1A-208ENST00000532781 KIF15Q9NS87 1388 aa20.06■□□□□ 0.8
ARID1A-208ENST00000532781 L3MBTL2Q969R5 705 aa20.05■□□□□ 0.8
ARID1A-208ENST00000532781 ARHGEF12Q9NZN5 1544 aa20.05■□□□□ 0.8
ARID1A-208ENST00000532781 TIMELESSQ9UNS1 1208 aa20.05■□□□□ 0.8
ARID1A-208ENST00000532781 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
ARID1A-208ENST00000532781 ANKRD30BQ9BXX2 1392 aa20.05■□□□□ 0.8
ARID1A-208ENST00000532781 CCDC141Q6ZP82 1450 aa20.04■□□□□ 0.8
ARID1A-208ENST00000532781 DDX10Q13206 875 aaKnown RBP20.03■□□□□ 0.8
ARID1A-208ENST00000532781 PKD2Q13563 968 aa20.03■□□□□ 0.8
ARID1A-208ENST00000532781 ARHGEF5Q12774 1597 aa20.03■□□□□ 0.8
ARID1A-208ENST00000532781 NUP155O75694 1391 aa20.02■□□□□ 0.8
ARID1A-208ENST00000532781 SHANK2Q9UPX8 1470 aa20.02■□□□□ 0.8
ARID1A-208ENST00000532781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.98■□□□□ 0.79
ARID1A-208ENST00000532781 PLCH2O75038 1416 aa19.97■□□□□ 0.79
ARID1A-208ENST00000532781 NBPF8Q3BBV2 869 aa19.96■□□□□ 0.79
ARID1A-208ENST00000532781 TRAPPC8Q9Y2L5 1435 aa19.96■□□□□ 0.79
ARID1A-208ENST00000532781 RPRD2Q5VT52 1461 aaKnown RBP19.96■□□□□ 0.79
ARID1A-208ENST00000532781 AFAP1Q8N556 730 aa19.95■□□□□ 0.78
ARID1A-208ENST00000532781 WDR7Q9Y4E6 1490 aa19.95■□□□□ 0.78
ARID1A-208ENST00000532781 ZNF326Q5BKZ1 582 aaKnown RBP19.93■□□□□ 0.78
ARID1A-208ENST00000532781 EFCAB2Q5VUJ9 269 aa19.93■□□□□ 0.78
ARID1A-208ENST00000532781 KIAA1107Q9UPP5 1409 aa19.93■□□□□ 0.78
ARID1A-208ENST00000532781 TEX14Q8IWB6 1497 aa19.92■□□□□ 0.78
ARID1A-208ENST00000532781 ASXL2Q76L83 1435 aa19.92■□□□□ 0.78
ARID1A-208ENST00000532781 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
ARID1A-208ENST00000532781 PLEKHH2Q8IVE3 1493 aa19.91■□□□□ 0.78
ARID1A-208ENST00000532781 ABCC1P33527 1531 aa19.9■□□□□ 0.78
ARID1A-208ENST00000532781 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.77
ARID1A-208ENST00000532781 HSPA5P11021 654 aaKnown RBP19.89■□□□□ 0.77
ARID1A-208ENST00000532781 RSPH4AQ5TD94 716 aa19.86■□□□□ 0.77
ARID1A-208ENST00000532781 FAM135AQ9P2D6 1515 aa19.85■□□□□ 0.77
ARID1A-208ENST00000532781 MAST1Q9Y2H9 1570 aa19.85■□□□□ 0.77
ARID1A-208ENST00000532781 FANCAO15360 1455 aa19.84■□□□□ 0.77
ARID1A-208ENST00000532781 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
ARID1A-208ENST00000532781 KDM2AQ9Y2K7 1162 aa19.83■□□□□ 0.76
ARID1A-208ENST00000532781 ABCA9Q8IUA7 1624 aa19.82■□□□□ 0.76
ARID1A-208ENST00000532781 NPM1P06748 294 aaKnown RBP eCLIP19.82■□□□□ 0.76
ARID1A-208ENST00000532781 PLXNC1O60486 1568 aa19.81■□□□□ 0.76
ARID1A-208ENST00000532781 KDM5DQ9BY66 1539 aa19.81■□□□□ 0.76
ARID1A-208ENST00000532781 SPAG9O60271 1321 aaKnown RBP19.81■□□□□ 0.76
ARID1A-208ENST00000532781 C11orf95C9JLR9 678 aaPredicted RBP19.81■□□□□ 0.76
ARID1A-208ENST00000532781 CENPBP07199 599 aaPredicted RBP19.8■□□□□ 0.76
ARID1A-208ENST00000532781 CYB5RLQ6IPT4 315 aa19.8■□□□□ 0.76
ARID1A-208ENST00000532781 WASHC2AQ641Q2 1341 aa19.78■□□□□ 0.76
ARID1A-208ENST00000532781 SCAPERQ9BY12 1400 aa19.77■□□□□ 0.76
ARID1A-208ENST00000532781 EIF4G2P78344 907 aaKnown RBP eCLIP19.77■□□□□ 0.76
ARID1A-208ENST00000532781 ADGRL1O94910 1474 aa19.77■□□□□ 0.76
ARID1A-208ENST00000532781 UNC13BO14795 1591 aa19.77■□□□□ 0.76
ARID1A-208ENST00000532781 ZFYVE16Q7Z3T8 1539 aa19.77■□□□□ 0.75
ARID1A-208ENST00000532781 RGL3Q3MIN7 710 aa19.77■□□□□ 0.75
ARID1A-208ENST00000532781 DUOX2Q9NRD8 1548 aa19.76■□□□□ 0.75
ARID1A-208ENST00000532781 DCAF11Q8TEB1 546 aa19.74■□□□□ 0.75
ARID1A-208ENST00000532781 PLA2R1Q13018 1463 aa19.73■□□□□ 0.75
ARID1A-208ENST00000532781 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
ARID1A-208ENST00000532781 GTF3C3Q9Y5Q9 886 aa19.71■□□□□ 0.75
ARID1A-208ENST00000532781 IQGAP3Q86VI3 1631 aa19.71■□□□□ 0.75
ARID1A-208ENST00000532781 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
ARID1A-208ENST00000532781 ATP7AQ04656 1500 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms