RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 COL17A1Q9UMD9 1497 aaPredicted RBP18.55■□□□□ 0.56
TRAF3IP2-212ENST00000532708 PREX2Q70Z35 1606 aa18.55■□□□□ 0.56
TRAF3IP2-212ENST00000532708 NEO1Q92859 1461 aa18.55■□□□□ 0.56
TRAF3IP2-212ENST00000532708 AKNAQ7Z591 1439 aa18.55■□□□□ 0.56
TRAF3IP2-212ENST00000532708 ZNF777Q9ULD5 760 aaPredicted RBP18.55■□□□□ 0.56
TRAF3IP2-212ENST00000532708 KDM6BO15054 1643 aa18.54■□□□□ 0.56
TRAF3IP2-212ENST00000532708 CFDP1Q9UEE9 299 aaPredicted RBP18.54■□□□□ 0.56
TRAF3IP2-212ENST00000532708 ARAP3Q8WWN8 1544 aa18.53■□□□□ 0.56
TRAF3IP2-212ENST00000532708 CFAP74Q9C0B2 1584 aa18.51■□□□□ 0.55
TRAF3IP2-212ENST00000532708 PHLDB1Q86UU1 1377 aa18.51■□□□□ 0.55
TRAF3IP2-212ENST00000532708 RAPGEF3O95398 923 aa18.5■□□□□ 0.55
TRAF3IP2-212ENST00000532708 ADGRL1O94910 1474 aa18.49■□□□□ 0.55
TRAF3IP2-212ENST00000532708 ZNF644Q9H582 1327 aaPredicted RBP18.49■□□□□ 0.55
TRAF3IP2-212ENST00000532708 ITSN2Q9NZM3 1697 aa18.49■□□□□ 0.55
TRAF3IP2-212ENST00000532708 SCAPERQ9BY12 1400 aa18.48■□□□□ 0.55
TRAF3IP2-212ENST00000532708 SAMD9LQ8IVG5 1584 aa18.46■□□□□ 0.55
TRAF3IP2-212ENST00000532708 MYOM3Q5VTT5 1437 aa18.45■□□□□ 0.54
TRAF3IP2-212ENST00000532708 DENND4BO75064 1496 aaPredicted RBP18.45■□□□□ 0.54
TRAF3IP2-212ENST00000532708 HNRNPMP52272 730 aaKnown RBP eCLIP18.44■□□□□ 0.54
TRAF3IP2-212ENST00000532708 ARHGEF12Q9NZN5 1544 aa18.44■□□□□ 0.54
TRAF3IP2-212ENST00000532708 AFAP1Q8N556 730 aa18.42■□□□□ 0.54
TRAF3IP2-212ENST00000532708 ABCC1P33527 1531 aa18.42■□□□□ 0.54
TRAF3IP2-212ENST00000532708 FRMPD1Q5SYB0 1578 aa18.41■□□□□ 0.54
TRAF3IP2-212ENST00000532708 SYCP2Q9BX26 1530 aa18.41■□□□□ 0.54
TRAF3IP2-212ENST00000532708 RICTORQ6R327 1708 aa18.4■□□□□ 0.54
TRAF3IP2-212ENST00000532708 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
TRAF3IP2-212ENST00000532708 MIA2Q96PC5 1412 aa18.4■□□□□ 0.54
TRAF3IP2-212ENST00000532708 TRAPPC8Q9Y2L5 1435 aa18.4■□□□□ 0.54
TRAF3IP2-212ENST00000532708 CAMSAP2Q08AD1 1489 aa18.39■□□□□ 0.53
TRAF3IP2-212ENST00000532708 FGD6Q6ZV73 1430 aa18.38■□□□□ 0.53
TRAF3IP2-212ENST00000532708 KIAA1107Q9UPP5 1409 aa18.38■□□□□ 0.53
TRAF3IP2-212ENST00000532708 PLEKHH2Q8IVE3 1493 aa18.38■□□□□ 0.53
TRAF3IP2-212ENST00000532708 ZNF518AQ6AHZ1 1483 aa18.36■□□□□ 0.53
TRAF3IP2-212ENST00000532708 MYT1LQ9UL68 1186 aa18.35■□□□□ 0.53
TRAF3IP2-212ENST00000532708 PTPN23Q9H3S7 1636 aa18.35■□□□□ 0.53
TRAF3IP2-212ENST00000532708 MBD5Q9P267 1494 aa18.35■□□□□ 0.53
TRAF3IP2-212ENST00000532708 FAM50AQ14320 339 aaKnown RBP18.33■□□□□ 0.53
TRAF3IP2-212ENST00000532708 KDM5CP41229 1560 aa18.31■□□□□ 0.52
TRAF3IP2-212ENST00000532708 ZMYM4Q5VZL5 1548 aa18.31■□□□□ 0.52
TRAF3IP2-212ENST00000532708 YEATS2Q9ULM3 1422 aa18.3■□□□□ 0.52
TRAF3IP2-212ENST00000532708 SPAG9O60271 1321 aaKnown RBP18.3■□□□□ 0.52
TRAF3IP2-212ENST00000532708 TCOF1Q13428 1488 aaKnown RBP18.3■□□□□ 0.52
TRAF3IP2-212ENST00000532708 RSPH4AQ5TD94 716 aa18.28■□□□□ 0.52
TRAF3IP2-212ENST00000532708 CCDC141Q6ZP82 1450 aa18.28■□□□□ 0.52
TRAF3IP2-212ENST00000532708 HECW2Q9P2P5 1572 aa18.28■□□□□ 0.52
TRAF3IP2-212ENST00000532708 ARHGEF5Q12774 1597 aa18.27■□□□□ 0.52
TRAF3IP2-212ENST00000532708 ZFYVE16Q7Z3T8 1539 aa18.27■□□□□ 0.52
TRAF3IP2-212ENST00000532708 MAGI2Q86UL8 1455 aa18.27■□□□□ 0.52
TRAF3IP2-212ENST00000532708 MLH3Q9UHC1 1453 aa18.27■□□□□ 0.52
TRAF3IP2-212ENST00000532708 TSPY4P0CV99 314 aa18.26■□□□□ 0.51
TRAF3IP2-212ENST00000532708 TSPY10P0CW01 314 aa18.26■□□□□ 0.51
TRAF3IP2-212ENST00000532708 KIDINS220Q9ULH0 1771 aa18.25■□□□□ 0.51
TRAF3IP2-212ENST00000532708 ABCC5O15440 1437 aa18.24■□□□□ 0.51
TRAF3IP2-212ENST00000532708 ARHGEF40Q8TER5 1519 aa18.24■□□□□ 0.51
TRAF3IP2-212ENST00000532708 ATP7AQ04656 1500 aa18.23■□□□□ 0.51
TRAF3IP2-212ENST00000532708 ITGAEP38570 1179 aa18.22■□□□□ 0.51
TRAF3IP2-212ENST00000532708 DAPK1P53355 1430 aa18.22■□□□□ 0.51
TRAF3IP2-212ENST00000532708 ABCA6Q8N139 1617 aa18.22■□□□□ 0.51
TRAF3IP2-212ENST00000532708 RRBP1Q9P2E9 1410 aaKnown RBP18.22■□□□□ 0.51
TRAF3IP2-212ENST00000532708 CHIC2Q9UKJ5 165 aa18.22■□□□□ 0.51
TRAF3IP2-212ENST00000532708 INO80Q9ULG1 1556 aaPredicted RBP18.22■□□□□ 0.51
TRAF3IP2-212ENST00000532708 DNMT1P26358 1616 aaKnown RBP18.21■□□□□ 0.51
TRAF3IP2-212ENST00000532708 ATP10AO60312 1499 aa18.21■□□□□ 0.51
TRAF3IP2-212ENST00000532708 DIP2CQ9Y2E4 1556 aa18.21■□□□□ 0.51
TRAF3IP2-212ENST00000532708 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
TRAF3IP2-212ENST00000532708 ARID4BQ4LE39 1312 aaPredicted RBP18.2■□□□□ 0.5
TRAF3IP2-212ENST00000532708 RTEL1-TNFRSF6BF6WH68 1400 aa18.19■□□□□ 0.5
TRAF3IP2-212ENST00000532708 CROCC2H7BZ55 1655 aa18.18■□□□□ 0.5
TRAF3IP2-212ENST00000532708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.17■□□□□ 0.5
TRAF3IP2-212ENST00000532708 SIGLEC1Q9BZZ2 1709 aa18.17■□□□□ 0.5
TRAF3IP2-212ENST00000532708 MAST1Q9Y2H9 1570 aa18.16■□□□□ 0.5
TRAF3IP2-212ENST00000532708 PTPRKQ15262 1439 aa18.16■□□□□ 0.5
TRAF3IP2-212ENST00000532708 RRP7BPQ9NSQ0 103 aa18.15■□□□□ 0.5
TRAF3IP2-212ENST00000532708 SHANK2Q9UPX8 1470 aa18.15■□□□□ 0.5
TRAF3IP2-212ENST00000532708 MLECQ14165 292 aa18.13■□□□□ 0.49
TRAF3IP2-212ENST00000532708 A2MP01023 1474 aa18.13■□□□□ 0.49
TRAF3IP2-212ENST00000532708 ADGBQ8N7X0 1667 aa18.12■□□□□ 0.49
TRAF3IP2-212ENST00000532708 REREQ9P2R6 1566 aa18.1■□□□□ 0.49
TRAF3IP2-212ENST00000532708 DHX29Q7Z478 1369 aaKnown RBP18.1■□□□□ 0.49
TRAF3IP2-212ENST00000532708 ANKRD30AQ9BXX3 1397 aa18.1■□□□□ 0.49
TRAF3IP2-212ENST00000532708 NCOA1Q15788 1441 aa18.1■□□□□ 0.49
TRAF3IP2-212ENST00000532708 KIF15Q9NS87 1388 aa18.1■□□□□ 0.49
TRAF3IP2-212ENST00000532708 PLXNC1O60486 1568 aa18.09■□□□□ 0.49
TRAF3IP2-212ENST00000532708 KDM4FA0A1W2PPD8 638 aa18.08■□□□□ 0.49
TRAF3IP2-212ENST00000532708 ADGRL2O95490 1459 aa18.07■□□□□ 0.48
TRAF3IP2-212ENST00000532708 KIF3BO15066 747 aa18.06■□□□□ 0.48
TRAF3IP2-212ENST00000532708 AGLP35573 1532 aa18.06■□□□□ 0.48
TRAF3IP2-212ENST00000532708 BCORL1Q5H9F3 1711 aa18.06■□□□□ 0.48
TRAF3IP2-212ENST00000532708 GGT6Q6P531 493 aa18.05■□□□□ 0.48
TRAF3IP2-212ENST00000532708 DUOX2Q9NRD8 1548 aa18.05■□□□□ 0.48
TRAF3IP2-212ENST00000532708 ROCK1Q13464 1354 aa18.03■□□□□ 0.48
TRAF3IP2-212ENST00000532708 ADAMTSL3P82987 1691 aa18.01■□□□□ 0.47
TRAF3IP2-212ENST00000532708 ERBINQ96RT1 1412 aa17.99■□□□□ 0.47
TRAF3IP2-212ENST00000532708 ANKRD50Q9ULJ7 1429 aa17.99■□□□□ 0.47
TRAF3IP2-212ENST00000532708 MADDQ8WXG6 1647 aa17.99■□□□□ 0.47
TRAF3IP2-212ENST00000532708 EIF2AK4Q9P2K8 1649 aaKnown RBP17.96■□□□□ 0.47
TRAF3IP2-212ENST00000532708 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
TRAF3IP2-212ENST00000532708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.96■□□□□ 0.47
TRAF3IP2-212ENST00000532708 ESF1Q9H501 851 aaKnown RBP17.96■□□□□ 0.47
TRAF3IP2-212ENST00000532708 FER1L4A9Z1Z3 1794 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms