RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 CCDC146Q8IYE0 955 aa14.2□□□□□ -0.14
CHEK1-213ENST00000532449 CFTRP13569 1480 aa14.19□□□□□ -0.14
CHEK1-213ENST00000532449 ST20-MTHFSA0A0A6YYL1 179 aa14.19□□□□□ -0.14
CHEK1-213ENST00000532449 ARID3AQ99856 593 aa14.19□□□□□ -0.14
CHEK1-213ENST00000532449 TSPY4P0CV99 314 aa14.18□□□□□ -0.14
CHEK1-213ENST00000532449 TSPY10P0CW01 314 aa14.18□□□□□ -0.14
CHEK1-213ENST00000532449 PRKCSHP14314 528 aaPredicted RBP14.18□□□□□ -0.14
CHEK1-213ENST00000532449 NBPF8Q3BBV2 869 aa14.18□□□□□ -0.14
CHEK1-213ENST00000532449 KIF7Q2M1P5 1343 aa14.17□□□□□ -0.14
CHEK1-213ENST00000532449 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
CHEK1-213ENST00000532449 SLC24A1O60721 1099 aa14.16□□□□□ -0.14
CHEK1-213ENST00000532449 NAP1L5Q96NT1 182 aaPredicted RBP14.16□□□□□ -0.14
CHEK1-213ENST00000532449 CRBNQ96SW2 442 aa14.15□□□□□ -0.14
CHEK1-213ENST00000532449 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.14
CHEK1-213ENST00000532449 CCDC18Q5T9S5 1454 aa14.14□□□□□ -0.15
CHEK1-213ENST00000532449 FHAD1B1AJZ9 1412 aa14.14□□□□□ -0.15
CHEK1-213ENST00000532449 CLUAP1Q96AJ1 413 aa14.14□□□□□ -0.15
CHEK1-213ENST00000532449 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.13□□□□□ -0.15
CHEK1-213ENST00000532449 FANCD2Q9BXW9 1451 aa14.13□□□□□ -0.15
CHEK1-213ENST00000532449 BCL2L13Q9BXK5 485 aa14.12□□□□□ -0.15
CHEK1-213ENST00000532449 UPF2Q9HAU5 1272 aaKnown RBP14.12□□□□□ -0.15
CHEK1-213ENST00000532449 DDRGK1Q96HY6 314 aa14.11□□□□□ -0.15
CHEK1-213ENST00000532449 RRP1P56182 461 aaKnown RBP14.1□□□□□ -0.15
CHEK1-213ENST00000532449 RRBP1Q9P2E9 1410 aaKnown RBP14.1□□□□□ -0.15
CHEK1-213ENST00000532449 KNSTRNQ9Y448 316 aa14.09□□□□□ -0.15
CHEK1-213ENST00000532449 IGF1RP08069 1367 aa14.09□□□□□ -0.15
CHEK1-213ENST00000532449 CCDC7Q96M83 1385 aa14.09□□□□□ -0.15
CHEK1-213ENST00000532449 FMN1Q68DA7 1419 aa14.08□□□□□ -0.16
CHEK1-213ENST00000532449 RRP7AQ9Y3A4 280 aaKnown RBP14.08□□□□□ -0.16
CHEK1-213ENST00000532449 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
CHEK1-213ENST00000532449 TCERG1O14776 1098 aaKnown RBP14.06□□□□□ -0.16
CHEK1-213ENST00000532449 CUX1P39880 1505 aa14.05□□□□□ -0.16
CHEK1-213ENST00000532449 SAFB2Q14151 953 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHEK1-213ENST00000532449 NCLP19338 710 aaKnown RBP14.05□□□□□ -0.16
CHEK1-213ENST00000532449 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
CHEK1-213ENST00000532449 LRRC9Q6ZRR7 1453 aa14.04□□□□□ -0.16
CHEK1-213ENST00000532449 CHMP7Q8WUX9 453 aaPredicted RBP14.04□□□□□ -0.16
CHEK1-213ENST00000532449 FRAT2O75474 233 aaPredicted RBP14.04□□□□□ -0.16
CHEK1-213ENST00000532449 NFKBIBQ15653 356 aa14.03□□□□□ -0.16
CHEK1-213ENST00000532449 PDS5BQ9NTI5 1447 aa14.03□□□□□ -0.16
CHEK1-213ENST00000532449 GSE1Q14687 1217 aa14.02□□□□□ -0.16
CHEK1-213ENST00000532449 NUP155O75694 1391 aa14.02□□□□□ -0.17
CHEK1-213ENST00000532449 PLEKHG5O94827 1062 aa14.02□□□□□ -0.17
CHEK1-213ENST00000532449 USP47Q96K76 1375 aa14.02□□□□□ -0.17
CHEK1-213ENST00000532449 HNRNPMP52272 730 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHEK1-213ENST00000532449 PANK3Q9H999 370 aa14□□□□□ -0.17
CHEK1-213ENST00000532449 RAD54L2Q9Y4B4 1467 aa14□□□□□ -0.17
CHEK1-213ENST00000532449 C20orf194Q5TEA3 1177 aa14□□□□□ -0.17
CHEK1-213ENST00000532449 ERCC6Q03468 1493 aa14□□□□□ -0.17
CHEK1-213ENST00000532449 FGD6Q6ZV73 1430 aa13.99□□□□□ -0.17
CHEK1-213ENST00000532449 CNTLNQ9NXG0 1405 aa13.99□□□□□ -0.17
CHEK1-213ENST00000532449 PLEKHD1A6NEE1 506 aa13.99□□□□□ -0.17
CHEK1-213ENST00000532449 ROCK2O75116 1388 aaKnown RBP13.99□□□□□ -0.17
CHEK1-213ENST00000532449 PLPPR3Q6T4P5 718 aa13.99□□□□□ -0.17
CHEK1-213ENST00000532449 BECN1Q14457 450 aa13.98□□□□□ -0.17
CHEK1-213ENST00000532449 FGD5Q6ZNL6 1462 aa13.98□□□□□ -0.17
CHEK1-213ENST00000532449 COG6Q9Y2V7 657 aa13.98□□□□□ -0.17
CHEK1-213ENST00000532449 MAPKBP1O60336 1514 aa13.98□□□□□ -0.17
CHEK1-213ENST00000532449 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.17
CHEK1-213ENST00000532449 APBB1O00213 710 aa13.96□□□□□ -0.17
CHEK1-213ENST00000532449 NLRP13Q86W25 1043 aa13.96□□□□□ -0.17
CHEK1-213ENST00000532449 MFAP1P55081 439 aaKnown RBP13.96□□□□□ -0.18
CHEK1-213ENST00000532449 PRXQ9BXM0 1461 aa13.95□□□□□ -0.18
CHEK1-213ENST00000532449 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
CHEK1-213ENST00000532449 FTSJ3Q8IY81 847 aaKnown RBP13.95□□□□□ -0.18
CHEK1-213ENST00000532449 NUTM2DQ5VT03 806 aaPredicted RBP13.95□□□□□ -0.18
CHEK1-213ENST00000532449 TRIM44Q96DX7 344 aaPredicted RBP13.95□□□□□ -0.18
CHEK1-213ENST00000532449 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
CHEK1-213ENST00000532449 NBPF1Q3BBV0 1214 aa13.95□□□□□ -0.18
CHEK1-213ENST00000532449 APAF1O14727 1248 aa13.94□□□□□ -0.18
CHEK1-213ENST00000532449 PNISRQ8TF01 805 aaKnown RBP13.94□□□□□ -0.18
CHEK1-213ENST00000532449 UACAQ9BZF9 1416 aa13.94□□□□□ -0.18
CHEK1-213ENST00000532449 MYBBP1AQ9BQG0 1328 aaKnown RBP13.92□□□□□ -0.18
CHEK1-213ENST00000532449 ADAMTS8Q9UP79 889 aa13.91□□□□□ -0.18
CHEK1-213ENST00000532449 PANK1Q8TE04 598 aa13.91□□□□□ -0.18
CHEK1-213ENST00000532449 BACH2Q9BYV9 841 aa13.91□□□□□ -0.18
CHEK1-213ENST00000532449 TMF1P82094 1093 aa13.91□□□□□ -0.18
CHEK1-213ENST00000532449 TOPBP1Q92547 1522 aa13.91□□□□□ -0.18
CHEK1-213ENST00000532449 LAMC3Q9Y6N6 1575 aa13.9□□□□□ -0.18
CHEK1-213ENST00000532449 AQRO60306 1485 aaKnown RBP eCLIP13.89□□□□□ -0.195e-8■■■■■ 34.4
CHEK1-213ENST00000532449 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
CHEK1-213ENST00000532449 URB2Q14146 1524 aaKnown RBP13.89□□□□□ -0.19
CHEK1-213ENST00000532449 ANP32BQ92688 251 aaKnown RBP13.89□□□□□ -0.19
CHEK1-213ENST00000532449 BCAR3O75815 825 aa13.89□□□□□ -0.19
CHEK1-213ENST00000532449 RALBP1Q15311 655 aa13.89□□□□□ -0.19
CHEK1-213ENST00000532449 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
CHEK1-213ENST00000532449 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
CHEK1-213ENST00000532449 GLIPR1L2Q4G1C9 344 aa13.87□□□□□ -0.19
CHEK1-213ENST00000532449 FOXD4L5Q5VV16 416 aaPredicted RBP13.87□□□□□ -0.19
CHEK1-213ENST00000532449 FOXD4L4Q8WXT5 416 aaPredicted RBP13.87□□□□□ -0.19
CHEK1-213ENST00000532449 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
CHEK1-213ENST00000532449 PTPRKQ15262 1439 aa13.87□□□□□ -0.19
CHEK1-213ENST00000532449 PNNQ9H307 717 aaKnown RBP13.86□□□□□ -0.19
CHEK1-213ENST00000532449 POGKQ9P215 609 aa13.86□□□□□ -0.19
CHEK1-213ENST00000532449 NCOA2Q15596 1464 aa13.85□□□□□ -0.19
CHEK1-213ENST00000532449 ELL2O00472 640 aaPredicted RBP13.85□□□□□ -0.19
CHEK1-213ENST00000532449 SOX12O15370 315 aa13.85□□□□□ -0.19
CHEK1-213ENST00000532449 HSP90AB1P08238 724 aaKnown RBP13.85□□□□□ -0.19
CHEK1-213ENST00000532449 PLCB2Q00722 1185 aa13.85□□□□□ -0.19
CHEK1-213ENST00000532449 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms