RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 CD109Q6YHK3 1445 aa14.49□□□□□ -0.09
SRPRA-207ENST00000532268 ABCA9Q8IUA7 1624 aa14.48□□□□□ -0.09
SRPRA-207ENST00000532268 ITGAEP38570 1179 aa14.48□□□□□ -0.09
SRPRA-207ENST00000532268 EFCAB2Q5VUJ9 269 aa14.48□□□□□ -0.09
SRPRA-207ENST00000532268 MIA2Q96PC5 1412 aa14.48□□□□□ -0.09
SRPRA-207ENST00000532268 CDC42BPAQ5VT25 1732 aa14.47□□□□□ -0.09
SRPRA-207ENST00000532268 PPRC1Q5VV67 1664 aaKnown RBP14.47□□□□□ -0.09
SRPRA-207ENST00000532268 PLCH2O75038 1416 aa14.47□□□□□ -0.09
SRPRA-207ENST00000532268 PTPN23Q9H3S7 1636 aa14.46□□□□□ -0.09
SRPRA-207ENST00000532268 PCGF6Q9BYE7 350 aa14.46□□□□□ -0.09
SRPRA-207ENST00000532268 RRBP1Q9P2E9 1410 aaKnown RBP14.46□□□□□ -0.09
SRPRA-207ENST00000532268 ZNF644Q9H582 1327 aaPredicted RBP14.45□□□□□ -0.1
SRPRA-207ENST00000532268 PREX2Q70Z35 1606 aa14.45□□□□□ -0.1
SRPRA-207ENST00000532268 TEX14Q8IWB6 1497 aa14.44□□□□□ -0.1
SRPRA-207ENST00000532268 CDC42BPBQ9Y5S2 1711 aa14.43□□□□□ -0.1
SRPRA-207ENST00000532268 CAMSAP2Q08AD1 1489 aa14.43□□□□□ -0.1
SRPRA-207ENST00000532268 FANCAO15360 1455 aa14.42□□□□□ -0.1
SRPRA-207ENST00000532268 KDM6BO15054 1643 aa14.41□□□□□ -0.1
SRPRA-207ENST00000532268 TCOF1Q13428 1488 aaKnown RBP14.4□□□□□ -0.1
SRPRA-207ENST00000532268 HNRNPMP52272 730 aaKnown RBP eCLIP14.4□□□□□ -0.1
SRPRA-207ENST00000532268 ARAP3Q8WWN8 1544 aa14.4□□□□□ -0.1
SRPRA-207ENST00000532268 SAMD9LQ8IVG5 1584 aa14.39□□□□□ -0.11
SRPRA-207ENST00000532268 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
SRPRA-207ENST00000532268 CFAP74Q9C0B2 1584 aa14.38□□□□□ -0.11
SRPRA-207ENST00000532268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.37□□□□□ -0.11
SRPRA-207ENST00000532268 AKNAQ7Z591 1439 aa14.37□□□□□ -0.11
SRPRA-207ENST00000532268 SYCP2Q9BX26 1530 aa14.36□□□□□ -0.11
SRPRA-207ENST00000532268 CHIC2Q9UKJ5 165 aa14.36□□□□□ -0.11
SRPRA-207ENST00000532268 MYT1LQ9UL68 1186 aa14.36□□□□□ -0.11
SRPRA-207ENST00000532268 ADGRL1O94910 1474 aa14.36□□□□□ -0.11
SRPRA-207ENST00000532268 SCAPERQ9BY12 1400 aa14.35□□□□□ -0.11
SRPRA-207ENST00000532268 TSPY4P0CV99 314 aa14.35□□□□□ -0.11
SRPRA-207ENST00000532268 TSPY10P0CW01 314 aa14.35□□□□□ -0.11
SRPRA-207ENST00000532268 NEO1Q92859 1461 aa14.35□□□□□ -0.11
SRPRA-207ENST00000532268 COL17A1Q9UMD9 1497 aaPredicted RBP14.35□□□□□ -0.11
SRPRA-207ENST00000532268 ABCC1P33527 1531 aa14.34□□□□□ -0.11
SRPRA-207ENST00000532268 DAPK1P53355 1430 aa14.33□□□□□ -0.11
SRPRA-207ENST00000532268 KIAA1107Q9UPP5 1409 aa14.33□□□□□ -0.11
SRPRA-207ENST00000532268 RSPH4AQ5TD94 716 aa14.33□□□□□ -0.12
SRPRA-207ENST00000532268 ABCC5O15440 1437 aa14.32□□□□□ -0.12
SRPRA-207ENST00000532268 CCDC141Q6ZP82 1450 aa14.32□□□□□ -0.12
SRPRA-207ENST00000532268 DNMT1P26358 1616 aaKnown RBP14.32□□□□□ -0.12
SRPRA-207ENST00000532268 AFAP1Q8N556 730 aa14.31□□□□□ -0.12
SRPRA-207ENST00000532268 ARHGEF12Q9NZN5 1544 aa14.31□□□□□ -0.12
SRPRA-207ENST00000532268 ARHGEF5Q12774 1597 aa14.3□□□□□ -0.12
SRPRA-207ENST00000532268 TRAPPC8Q9Y2L5 1435 aa14.3□□□□□ -0.12
SRPRA-207ENST00000532268 DENND4BO75064 1496 aaPredicted RBP14.3□□□□□ -0.12
SRPRA-207ENST00000532268 MBD5Q9P267 1494 aa14.3□□□□□ -0.12
SRPRA-207ENST00000532268 RAPGEF3O95398 923 aa14.29□□□□□ -0.12
SRPRA-207ENST00000532268 RRP7BPQ9NSQ0 103 aa14.29□□□□□ -0.12
SRPRA-207ENST00000532268 SPAG9O60271 1321 aaKnown RBP14.29□□□□□ -0.12
SRPRA-207ENST00000532268 PTPRKQ15262 1439 aa14.28□□□□□ -0.12
SRPRA-207ENST00000532268 C9orf84Q5VXU9 1444 aa14.28□□□□□ -0.12
SRPRA-207ENST00000532268 ZNF518AQ6AHZ1 1483 aa14.26□□□□□ -0.13
SRPRA-207ENST00000532268 POGZQ7Z3K3 1410 aa14.26□□□□□ -0.13
SRPRA-207ENST00000532268 SHANK2Q9UPX8 1470 aa14.25□□□□□ -0.13
SRPRA-207ENST00000532268 ANKRD30AQ9BXX3 1397 aa14.25□□□□□ -0.13
SRPRA-207ENST00000532268 CROCC2H7BZ55 1655 aa14.25□□□□□ -0.13
SRPRA-207ENST00000532268 ADGBQ8N7X0 1667 aa14.22□□□□□ -0.13
SRPRA-207ENST00000532268 ROCK1Q13464 1354 aa14.22□□□□□ -0.13
SRPRA-207ENST00000532268 SETD5Q9C0A6 1442 aa14.21□□□□□ -0.13
SRPRA-207ENST00000532268 KIF15Q9NS87 1388 aa14.21□□□□□ -0.14
SRPRA-207ENST00000532268 ATP7AQ04656 1500 aa14.2□□□□□ -0.14
SRPRA-207ENST00000532268 NCOA1Q15788 1441 aa14.2□□□□□ -0.14
SRPRA-207ENST00000532268 MAST1Q9Y2H9 1570 aa14.2□□□□□ -0.14
SRPRA-207ENST00000532268 ADGRL2O95490 1459 aa14.19□□□□□ -0.14
SRPRA-207ENST00000532268 RTEL1-TNFRSF6BF6WH68 1400 aa14.19□□□□□ -0.14
SRPRA-207ENST00000532268 ZFYVE16Q7Z3T8 1539 aa14.19□□□□□ -0.14
SRPRA-207ENST00000532268 RICTORQ6R327 1708 aa14.18□□□□□ -0.14
SRPRA-207ENST00000532268 HECW2Q9P2P5 1572 aa14.18□□□□□ -0.14
SRPRA-207ENST00000532268 HFM1A2PYH4 1435 aa14.18□□□□□ -0.14
SRPRA-207ENST00000532268 KDM5CP41229 1560 aa14.17□□□□□ -0.14
SRPRA-207ENST00000532268 FRMPD1Q5SYB0 1578 aa14.17□□□□□ -0.14
SRPRA-207ENST00000532268 NAIPQ13075 1403 aa14.17□□□□□ -0.14
SRPRA-207ENST00000532268 RAB3GAP2Q9H2M9 1393 aa14.17□□□□□ -0.14
SRPRA-207ENST00000532268 INO80Q9ULG1 1556 aaPredicted RBP14.17□□□□□ -0.14
SRPRA-207ENST00000532268 TRIM52Q96A61 297 aa14.16□□□□□ -0.14
SRPRA-207ENST00000532268 MLH3Q9UHC1 1453 aa14.16□□□□□ -0.14
SRPRA-207ENST00000532268 PLXNC1O60486 1568 aa14.16□□□□□ -0.14
SRPRA-207ENST00000532268 KDM4FA0A1W2PPD8 638 aa14.15□□□□□ -0.14
SRPRA-207ENST00000532268 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
SRPRA-207ENST00000532268 GCC2Q8IWJ2 1684 aa14.14□□□□□ -0.15
SRPRA-207ENST00000532268 DUOX2Q9NRD8 1548 aa14.14□□□□□ -0.15
SRPRA-207ENST00000532268 KIDINS220Q9ULH0 1771 aa14.14□□□□□ -0.15
SRPRA-207ENST00000532268 ZMYM4Q5VZL5 1548 aa14.13□□□□□ -0.15
SRPRA-207ENST00000532268 YEATS2Q9ULM3 1422 aa14.13□□□□□ -0.15
SRPRA-207ENST00000532268 MAGI2Q86UL8 1455 aa14.12□□□□□ -0.15
SRPRA-207ENST00000532268 ABCA6Q8N139 1617 aa14.12□□□□□ -0.15
SRPRA-207ENST00000532268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.153e-6■■□□□ 11.4
SRPRA-207ENST00000532268 A2MP01023 1474 aa14.11□□□□□ -0.15
SRPRA-207ENST00000532268 DHX29Q7Z478 1369 aaKnown RBP14.1□□□□□ -0.15
SRPRA-207ENST00000532268 DIP2CQ9Y2E4 1556 aa14.1□□□□□ -0.15
SRPRA-207ENST00000532268 KIF3BO15066 747 aa14.1□□□□□ -0.15
SRPRA-207ENST00000532268 ERBINQ96RT1 1412 aa14.09□□□□□ -0.15
SRPRA-207ENST00000532268 ATP10AO60312 1499 aa14.09□□□□□ -0.15
SRPRA-207ENST00000532268 ARHGEF40Q8TER5 1519 aa14.08□□□□□ -0.16
SRPRA-207ENST00000532268 ARID4BQ4LE39 1312 aaPredicted RBP14.08□□□□□ -0.16
SRPRA-207ENST00000532268 HRCP23327 699 aa14.07□□□□□ -0.16
SRPRA-207ENST00000532268 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
SRPRA-207ENST00000532268 ACIN1Q9UKV3 1341 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms