RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 EEA1Q15075 1411 aa14.62□□□□□ -0.07
PTP4A2-213ENST00000532001 CLEC11AQ9Y240 323 aa14.62□□□□□ -0.07
PTP4A2-213ENST00000532001 WDR7Q9Y4E6 1490 aa14.6□□□□□ -0.07
PTP4A2-213ENST00000532001 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
PTP4A2-213ENST00000532001 TEX14Q8IWB6 1497 aa14.57□□□□□ -0.08
PTP4A2-213ENST00000532001 CFAP43Q8NDM7 1665 aa14.56□□□□□ -0.08
PTP4A2-213ENST00000532001 MAGI3Q5TCQ9 1506 aa14.52□□□□□ -0.08
PTP4A2-213ENST00000532001 KIF21BO75037 1637 aa14.52□□□□□ -0.09
PTP4A2-213ENST00000532001 COL17A1Q9UMD9 1497 aaPredicted RBP14.5□□□□□ -0.09
PTP4A2-213ENST00000532001 RAPGEF6Q8TEU7 1601 aa14.49□□□□□ -0.09
PTP4A2-213ENST00000532001 ATP10BO94823 1461 aa14.47□□□□□ -0.09
PTP4A2-213ENST00000532001 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
PTP4A2-213ENST00000532001 CD109Q6YHK3 1445 aa14.46□□□□□ -0.09
PTP4A2-213ENST00000532001 EFCAB5A4FU69 1503 aa14.46□□□□□ -0.1
PTP4A2-213ENST00000532001 ABCA9Q8IUA7 1624 aa14.45□□□□□ -0.1
PTP4A2-213ENST00000532001 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
PTP4A2-213ENST00000532001 KDM4FA0A1W2PPD8 638 aa14.44□□□□□ -0.1
PTP4A2-213ENST00000532001 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
PTP4A2-213ENST00000532001 NUP153P49790 1475 aaKnown RBP14.42□□□□□ -0.1
PTP4A2-213ENST00000532001 PROM2Q8N271 834 aa14.41□□□□□ -0.1
PTP4A2-213ENST00000532001 ARAP3Q8WWN8 1544 aa14.41□□□□□ -0.1
PTP4A2-213ENST00000532001 ADGRL1O94910 1474 aa14.4□□□□□ -0.1
PTP4A2-213ENST00000532001 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
PTP4A2-213ENST00000532001 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
PTP4A2-213ENST00000532001 FHOD3Q2V2M9 1422 aa14.4□□□□□ -0.1
PTP4A2-213ENST00000532001 KCNH8Q96L42 1107 aa14.38□□□□□ -0.11
PTP4A2-213ENST00000532001 PHLDB1Q86UU1 1377 aa14.37□□□□□ -0.11
PTP4A2-213ENST00000532001 NEO1Q92859 1461 aa14.36□□□□□ -0.11
PTP4A2-213ENST00000532001 ARID3CA6NKF2 412 aa14.33□□□□□ -0.12
PTP4A2-213ENST00000532001 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
PTP4A2-213ENST00000532001 SP7Q8TDD2 431 aaPredicted RBP14.32□□□□□ -0.12
PTP4A2-213ENST00000532001 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
PTP4A2-213ENST00000532001 FRMPD1Q5SYB0 1578 aa14.3□□□□□ -0.12
PTP4A2-213ENST00000532001 FMN1Q68DA7 1419 aa14.28□□□□□ -0.12
PTP4A2-213ENST00000532001 HECW1Q76N89 1606 aa14.28□□□□□ -0.12
PTP4A2-213ENST00000532001 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
PTP4A2-213ENST00000532001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.27□□□□□ -0.12
PTP4A2-213ENST00000532001 HAX1O00165 279 aa14.27□□□□□ -0.13
PTP4A2-213ENST00000532001 TTC37Q6PGP7 1564 aa14.26□□□□□ -0.13
PTP4A2-213ENST00000532001 RANGAP1P46060 587 aaPredicted RBP14.26□□□□□ -0.13
PTP4A2-213ENST00000532001 RICTORQ6R327 1708 aa14.26□□□□□ -0.13
PTP4A2-213ENST00000532001 CDK13Q14004 1512 aaKnown RBP14.25□□□□□ -0.13
PTP4A2-213ENST00000532001 PLEKHD1A6NEE1 506 aa14.25□□□□□ -0.13
PTP4A2-213ENST00000532001 FKBP8Q14318 412 aa14.25□□□□□ -0.13
PTP4A2-213ENST00000532001 ARHGEF40Q8TER5 1519 aa14.24□□□□□ -0.13
PTP4A2-213ENST00000532001 ADAMTSL3P82987 1691 aa14.23□□□□□ -0.13
PTP4A2-213ENST00000532001 ZMYM4Q5VZL5 1548 aa14.22□□□□□ -0.13
PTP4A2-213ENST00000532001 UBTFP17480 764 aaKnown RBP14.22□□□□□ -0.13
PTP4A2-213ENST00000532001 FANCAO15360 1455 aa14.22□□□□□ -0.13
PTP4A2-213ENST00000532001 DENND4BO75064 1496 aaPredicted RBP14.21□□□□□ -0.13
PTP4A2-213ENST00000532001 AKNAQ7Z591 1439 aa14.21□□□□□ -0.13
PTP4A2-213ENST00000532001 CREBZFQ9NS37 354 aa14.2□□□□□ -0.14
PTP4A2-213ENST00000532001 HECW2Q9P2P5 1572 aa14.2□□□□□ -0.14
PTP4A2-213ENST00000532001 MYO5CQ9NQX4 1742 aa14.2□□□□□ -0.14
PTP4A2-213ENST00000532001 BCORL1Q5H9F3 1711 aa14.19□□□□□ -0.14
PTP4A2-213ENST00000532001 LRRIQ1Q96JM4 1722 aa14.19□□□□□ -0.14
PTP4A2-213ENST00000532001 RAPGEF3O95398 923 aa14.19□□□□□ -0.14
PTP4A2-213ENST00000532001 FARP1Q9Y4F1 1045 aaPredicted RBP14.18□□□□□ -0.14
PTP4A2-213ENST00000532001 KIF14Q15058 1648 aa14.18□□□□□ -0.14
PTP4A2-213ENST00000532001 PLCH2O75038 1416 aa14.17□□□□□ -0.14
PTP4A2-213ENST00000532001 MAGI2Q86UL8 1455 aa14.17□□□□□ -0.14
PTP4A2-213ENST00000532001 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
PTP4A2-213ENST00000532001 TROQ12816 1431 aaPredicted RBP14.15□□□□□ -0.14
PTP4A2-213ENST00000532001 PCF11O94913 1555 aaKnown RBP14.14□□□□□ -0.15
PTP4A2-213ENST00000532001 CDK11AQ9UQ88 783 aaPredicted RBP14.14□□□□□ -0.15
PTP4A2-213ENST00000532001 ZFYVE16Q7Z3T8 1539 aa14.14□□□□□ -0.15
PTP4A2-213ENST00000532001 POGZQ7Z3K3 1410 aa14.14□□□□□ -0.15
PTP4A2-213ENST00000532001 CASKIN1Q8WXD9 1431 aa14.14□□□□□ -0.15
PTP4A2-213ENST00000532001 CCDC18Q5T9S5 1454 aa14.13□□□□□ -0.15
PTP4A2-213ENST00000532001 MADDQ8WXG6 1647 aa14.13□□□□□ -0.15
PTP4A2-213ENST00000532001 EVX2Q03828 476 aa14.13□□□□□ -0.15
PTP4A2-213ENST00000532001 PTPRMP28827 1452 aa14.12□□□□□ -0.15
PTP4A2-213ENST00000532001 CLIP1P30622 1438 aa14.12□□□□□ -0.15
PTP4A2-213ENST00000532001 FYCO1Q9BQS8 1478 aa14.11□□□□□ -0.15
PTP4A2-213ENST00000532001 SIGLEC1Q9BZZ2 1709 aa14.1□□□□□ -0.15
PTP4A2-213ENST00000532001 SCAPERQ9BY12 1400 aa14.1□□□□□ -0.15
PTP4A2-213ENST00000532001 PREX2Q70Z35 1606 aa14.09□□□□□ -0.15
PTP4A2-213ENST00000532001 CDC42BPBQ9Y5S2 1711 aa14.09□□□□□ -0.15
PTP4A2-213ENST00000532001 KDM5CP41229 1560 aa14.09□□□□□ -0.15
PTP4A2-213ENST00000532001 YEATS2Q9ULM3 1422 aa14.08□□□□□ -0.15
PTP4A2-213ENST00000532001 RIMS1Q86UR5 1692 aaKnown RBP14.07□□□□□ -0.16
PTP4A2-213ENST00000532001 ARHGAP5Q13017 1502 aa14.07□□□□□ -0.16
PTP4A2-213ENST00000532001 EFCAB2Q5VUJ9 269 aa14.07□□□□□ -0.16
PTP4A2-213ENST00000532001 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
PTP4A2-213ENST00000532001 ATP1B4Q9UN42 357 aaPredicted RBP14.06□□□□□ -0.16
PTP4A2-213ENST00000532001 CDC42BPAQ5VT25 1732 aa14.04□□□□□ -0.16
PTP4A2-213ENST00000532001 FER1L4A9Z1Z3 1794 aa14.04□□□□□ -0.16
PTP4A2-213ENST00000532001 ARID4BQ4LE39 1312 aaPredicted RBP14.04□□□□□ -0.16
PTP4A2-213ENST00000532001 C9orf84Q5VXU9 1444 aa14.04□□□□□ -0.16
PTP4A2-213ENST00000532001 ATP10AO60312 1499 aa14.04□□□□□ -0.16
PTP4A2-213ENST00000532001 ABCC1P33527 1531 aa14.04□□□□□ -0.16
PTP4A2-213ENST00000532001 REREQ9P2R6 1566 aa14.04□□□□□ -0.16
PTP4A2-213ENST00000532001 ITSN2Q9NZM3 1697 aa14.03□□□□□ -0.16
PTP4A2-213ENST00000532001 ARHGEF12Q9NZN5 1544 aa14.02□□□□□ -0.16
PTP4A2-213ENST00000532001 MNX1P50219 401 aaPredicted RBP14.02□□□□□ -0.17
PTP4A2-213ENST00000532001 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
PTP4A2-213ENST00000532001 LMTK3Q96Q04 1460 aa14□□□□□ -0.17
PTP4A2-213ENST00000532001 MLH3Q9UHC1 1453 aa14□□□□□ -0.17
PTP4A2-213ENST00000532001 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
PTP4A2-213ENST00000532001 ABCA6Q8N139 1617 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms