RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 PCF11O94913 1555 aaKnown RBP34.84■■■■□ 3.17
FDFT1-220ENST00000531733 POGZQ7Z3K3 1410 aa34.82■■■■□ 3.17
FDFT1-220ENST00000531733 KIF14Q15058 1648 aa34.82■■■■□ 3.16
FDFT1-220ENST00000531733 MAGI2Q86UL8 1455 aa34.79■■■■□ 3.16
FDFT1-220ENST00000531733 LRRIQ1Q96JM4 1722 aa34.78■■■■□ 3.16
FDFT1-220ENST00000531733 PLPPR3Q6T4P5 718 aa34.77■■■■□ 3.16
FDFT1-220ENST00000531733 MYO5CQ9NQX4 1742 aa34.77■■■■□ 3.16
FDFT1-220ENST00000531733 MLECQ14165 292 aa34.74■■■■□ 3.15
FDFT1-220ENST00000531733 EFCAB2Q5VUJ9 269 aa34.71■■■■□ 3.15
FDFT1-220ENST00000531733 TROQ12816 1431 aaPredicted RBP34.71■■■■□ 3.15
FDFT1-220ENST00000531733 CDK11AQ9UQ88 783 aaPredicted RBP34.69■■■■□ 3.14
FDFT1-220ENST00000531733 HSPA2P54652 639 aa34.68■■■■□ 3.14
FDFT1-220ENST00000531733 FER1L4A9Z1Z3 1794 aa34.66■■■■□ 3.14
FDFT1-220ENST00000531733 ATP10AO60312 1499 aa34.65■■■■□ 3.14
FDFT1-220ENST00000531733 FBXO41Q8TF61 875 aa34.63■■■■□ 3.13
FDFT1-220ENST00000531733 ARHGAP5Q13017 1502 aa34.63■■■■□ 3.13
FDFT1-220ENST00000531733 C9orf84Q5VXU9 1444 aa34.62■■■■□ 3.13
FDFT1-220ENST00000531733 ARHGEF12Q9NZN5 1544 aa34.6■■■■□ 3.13
FDFT1-220ENST00000531733 AFAP1Q8N556 730 aa34.6■■■■□ 3.13
FDFT1-220ENST00000531733 CLIP1P30622 1438 aa34.59■■■■□ 3.13
FDFT1-220ENST00000531733 CDC42BPBQ9Y5S2 1711 aa34.58■■■■□ 3.13
FDFT1-220ENST00000531733 ZNF518AQ6AHZ1 1483 aa34.58■■■■□ 3.13
FDFT1-220ENST00000531733 KDM5CP41229 1560 aa34.57■■■■□ 3.13
FDFT1-220ENST00000531733 CASKIN1Q8WXD9 1431 aa34.52■■■■□ 3.12
FDFT1-220ENST00000531733 DIP2CQ9Y2E4 1556 aa34.49■■■■□ 3.11
FDFT1-220ENST00000531733 CEBPAP49715 358 aaPredicted RBP34.49■■■■□ 3.11
FDFT1-220ENST00000531733 PREX2Q70Z35 1606 aa34.48■■■■□ 3.11
FDFT1-220ENST00000531733 TRAPPC8Q9Y2L5 1435 aa34.46■■■■□ 3.11
FDFT1-220ENST00000531733 CCDC18Q5T9S5 1454 aa34.46■■■■□ 3.11
FDFT1-220ENST00000531733 ABCA6Q8N139 1617 aa34.45■■■■□ 3.11
FDFT1-220ENST00000531733 ABCC1P33527 1531 aa34.44■■■■□ 3.1
FDFT1-220ENST00000531733 MYT1LQ9UL68 1186 aa34.43■■■■□ 3.1
FDFT1-220ENST00000531733 MLH3Q9UHC1 1453 aa34.4■■■■□ 3.1
FDFT1-220ENST00000531733 ITSN2Q9NZM3 1697 aa34.4■■■■□ 3.1
FDFT1-220ENST00000531733 REREQ9P2R6 1566 aa34.39■■■■□ 3.1
FDFT1-220ENST00000531733 CDC42BPAQ5VT25 1732 aa34.38■■■■□ 3.09
FDFT1-220ENST00000531733 PREX1Q8TCU6 1659 aa34.38■■■■□ 3.09
FDFT1-220ENST00000531733 FYCO1Q9BQS8 1478 aa34.36■■■■□ 3.09
FDFT1-220ENST00000531733 KIDINS220Q9ULH0 1771 aa34.31■■■■□ 3.08
FDFT1-220ENST00000531733 AGLP35573 1532 aa34.28■■■■□ 3.08
FDFT1-220ENST00000531733 SAMD9LQ8IVG5 1584 aa34.27■■■■□ 3.08
FDFT1-220ENST00000531733 C3P01024 1663 aa34.26■■■■□ 3.08
FDFT1-220ENST00000531733 CERKQ8TCT0 537 aa34.25■■■■□ 3.07
FDFT1-220ENST00000531733 ZNF777Q9ULD5 760 aaPredicted RBP34.25■■■■□ 3.07
FDFT1-220ENST00000531733 STRCQ7RTU9 1775 aa34.25■■■■□ 3.07
FDFT1-220ENST00000531733 GPATCH8Q9UKJ3 1502 aaKnown RBP34.25■■■■□ 3.07
FDFT1-220ENST00000531733 UHRF1BP1Q6BDS2 1440 aa34.22■■■■□ 3.07
FDFT1-220ENST00000531733 SYCP2Q9BX26 1530 aa34.21■■■■□ 3.07
FDFT1-220ENST00000531733 SETD1BQ9UPS6 1966 aaKnown RBP34.19■■■■□ 3.06
FDFT1-220ENST00000531733 HNRNPMP52272 730 aaKnown RBP eCLIP34.17■■■■□ 3.06
FDFT1-220ENST00000531733 ESF1Q9H501 851 aaKnown RBP34.11■■■■□ 3.05
FDFT1-220ENST00000531733 SPAG9O60271 1321 aaKnown RBP34.1■■■■□ 3.05
FDFT1-220ENST00000531733 SUPT6HQ7KZ85 1726 aaKnown RBP34.07■■■■□ 3.05
FDFT1-220ENST00000531733 CFDP1Q9UEE9 299 aaPredicted RBP34.07■■■■□ 3.04
FDFT1-220ENST00000531733 ATP7AQ04656 1500 aa34.06■■■■□ 3.04
FDFT1-220ENST00000531733 CCNB3Q8WWL7 1395 aa34.06■■■■□ 3.04
FDFT1-220ENST00000531733 CNTLNQ9NXG0 1405 aa34.05■■■■□ 3.04
FDFT1-220ENST00000531733 KIAA1107Q9UPP5 1409 aa34.05■■■■□ 3.04
FDFT1-220ENST00000531733 INO80Q9ULG1 1556 aaPredicted RBP34.05■■■■□ 3.04
FDFT1-220ENST00000531733 DMRT2Q9Y5R5 561 aa34.04■■■■□ 3.04
FDFT1-220ENST00000531733 MTUS2Q5JR59 1369 aa34.03■■■■□ 3.04
FDFT1-220ENST00000531733 PLXNC1O60486 1568 aa34.01■■■■□ 3.03
FDFT1-220ENST00000531733 PLEKHH2Q8IVE3 1493 aa34■■■■□ 3.03
FDFT1-220ENST00000531733 ZNF644Q9H582 1327 aaPredicted RBP34■■■■□ 3.03
FDFT1-220ENST00000531733 MROH2AA6NES4 1674 aa33.99■■■■□ 3.03
FDFT1-220ENST00000531733 TIAM1Q13009 1591 aa33.98■■■■□ 3.03
FDFT1-220ENST00000531733 PTPRTO14522 1441 aa33.98■■■■□ 3.03
FDFT1-220ENST00000531733 ZMYM3Q14202 1370 aa33.98■■■■□ 3.03
FDFT1-220ENST00000531733 A2MP01023 1474 aa33.97■■■■□ 3.03
FDFT1-220ENST00000531733 CLTCQ00610 1675 aaKnown RBP33.95■■■■□ 3.03
FDFT1-220ENST00000531733 NCOA1Q15788 1441 aa33.95■■■■□ 3.02
FDFT1-220ENST00000531733 NPATQ14207 1427 aa33.93■■■■□ 3.02
FDFT1-220ENST00000531733 EHBP1L1Q8N3D4 1523 aa33.91■■■■□ 3.02
FDFT1-220ENST00000531733 MBD5Q9P267 1494 aa33.9■■■■□ 3.02
FDFT1-220ENST00000531733 CAMSAP1Q5T5Y3 1602 aa33.89■■■■□ 3.02
FDFT1-220ENST00000531733 CEP162Q5TB80 1403 aa33.88■■■■□ 3.01
FDFT1-220ENST00000531733 GGT6Q6P531 493 aa33.88■■■■□ 3.01
FDFT1-220ENST00000531733 LTBP4Q8N2S1 1624 aa33.87■■■■□ 3.01
FDFT1-220ENST00000531733 ADGBQ8N7X0 1667 aa33.84■■■■□ 3.01
FDFT1-220ENST00000531733 PTPRKQ15262 1439 aa33.84■■■■□ 3.01
FDFT1-220ENST00000531733 MYO3AQ8NEV4 1616 aa33.82■■■■□ 3
FDFT1-220ENST00000531733 NCKAP5LQ9HCH0 1330 aa33.8■■■■□ 3
FDFT1-220ENST00000531733 ZNF142P52746 1687 aaPredicted RBP33.78■■■■□ 3
FDFT1-220ENST00000531733 RTEL1-TNFRSF6BF6WH68 1400 aa33.75■■■□□ 2.99
FDFT1-220ENST00000531733 NCOA2Q15596 1464 aa33.75■■■□□ 2.99
FDFT1-220ENST00000531733 CEP170BQ9Y4F5 1589 aaPredicted RBP33.74■■■□□ 2.99
FDFT1-220ENST00000531733 DHX29Q7Z478 1369 aaKnown RBP33.72■■■□□ 2.99
FDFT1-220ENST00000531733 CAMSAP2Q08AD1 1489 aa33.71■■■□□ 2.99
FDFT1-220ENST00000531733 PPP6R1Q9UPN7 881 aa33.69■■■□□ 2.98
FDFT1-220ENST00000531733 CCDC141Q6ZP82 1450 aa33.69■■■□□ 2.98
FDFT1-220ENST00000531733 ZNF335Q9H4Z2 1342 aaPredicted RBP33.68■■■□□ 2.98
FDFT1-220ENST00000531733 PLA2R1Q13018 1463 aa33.68■■■□□ 2.98
FDFT1-220ENST00000531733 TCOF1Q13428 1488 aaKnown RBP33.67■■■□□ 2.98
FDFT1-220ENST00000531733 IQSEC2Q5JU85 1478 aa33.64■■■□□ 2.98
FDFT1-220ENST00000531733 KIF3BO15066 747 aa33.63■■■□□ 2.97
FDFT1-220ENST00000531733 PKD2Q13563 968 aa33.61■■■□□ 2.97
FDFT1-220ENST00000531733 FBXO31Q5XUX0 539 aaPredicted RBP33.61■■■□□ 2.97
FDFT1-220ENST00000531733 DNMT1P26358 1616 aaKnown RBP33.61■■■□□ 2.97
FDFT1-220ENST00000531733 A2ML1A8K2U0 1454 aa33.6■■■□□ 2.97
FDFT1-220ENST00000531733 DISP3Q9P2K9 1392 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms