RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-220	ENST00000531733	PCF11	O94913	1555 aa	Known RBP	34.84	■■■■□ 3.17
FDFT1-220	ENST00000531733	POGZ	Q7Z3K3	1410 aa		34.82	■■■■□ 3.17
FDFT1-220	ENST00000531733	KIF14	Q15058	1648 aa		34.82	■■■■□ 3.16
FDFT1-220	ENST00000531733	MAGI2	Q86UL8	1455 aa		34.79	■■■■□ 3.16
FDFT1-220	ENST00000531733	LRRIQ1	Q96JM4	1722 aa		34.78	■■■■□ 3.16
FDFT1-220	ENST00000531733	PLPPR3	Q6T4P5	718 aa		34.77	■■■■□ 3.16
FDFT1-220	ENST00000531733	MYO5C	Q9NQX4	1742 aa		34.77	■■■■□ 3.16
FDFT1-220	ENST00000531733	MLEC	Q14165	292 aa		34.74	■■■■□ 3.15
FDFT1-220	ENST00000531733	EFCAB2	Q5VUJ9	269 aa		34.71	■■■■□ 3.15
FDFT1-220	ENST00000531733	TRO	Q12816	1431 aa	Predicted RBP	34.71	■■■■□ 3.15
FDFT1-220	ENST00000531733	CDK11A	Q9UQ88	783 aa	Predicted RBP	34.69	■■■■□ 3.14
FDFT1-220	ENST00000531733	HSPA2	P54652	639 aa		34.68	■■■■□ 3.14
FDFT1-220	ENST00000531733	FER1L4	A9Z1Z3	1794 aa		34.66	■■■■□ 3.14
FDFT1-220	ENST00000531733	ATP10A	O60312	1499 aa		34.65	■■■■□ 3.14
FDFT1-220	ENST00000531733	FBXO41	Q8TF61	875 aa		34.63	■■■■□ 3.13
FDFT1-220	ENST00000531733	ARHGAP5	Q13017	1502 aa		34.63	■■■■□ 3.13
FDFT1-220	ENST00000531733	C9orf84	Q5VXU9	1444 aa		34.62	■■■■□ 3.13
FDFT1-220	ENST00000531733	ARHGEF12	Q9NZN5	1544 aa		34.6	■■■■□ 3.13
FDFT1-220	ENST00000531733	AFAP1	Q8N556	730 aa		34.6	■■■■□ 3.13
FDFT1-220	ENST00000531733	CLIP1	P30622	1438 aa		34.59	■■■■□ 3.13
FDFT1-220	ENST00000531733	CDC42BPB	Q9Y5S2	1711 aa		34.58	■■■■□ 3.13
FDFT1-220	ENST00000531733	ZNF518A	Q6AHZ1	1483 aa		34.58	■■■■□ 3.13
FDFT1-220	ENST00000531733	KDM5C	P41229	1560 aa		34.57	■■■■□ 3.13
FDFT1-220	ENST00000531733	CASKIN1	Q8WXD9	1431 aa		34.52	■■■■□ 3.12
FDFT1-220	ENST00000531733	DIP2C	Q9Y2E4	1556 aa		34.49	■■■■□ 3.11
FDFT1-220	ENST00000531733	CEBPA	P49715	358 aa	Predicted RBP	34.49	■■■■□ 3.11
FDFT1-220	ENST00000531733	PREX2	Q70Z35	1606 aa		34.48	■■■■□ 3.11
FDFT1-220	ENST00000531733	TRAPPC8	Q9Y2L5	1435 aa		34.46	■■■■□ 3.11
FDFT1-220	ENST00000531733	CCDC18	Q5T9S5	1454 aa		34.46	■■■■□ 3.11
FDFT1-220	ENST00000531733	ABCA6	Q8N139	1617 aa		34.45	■■■■□ 3.11
FDFT1-220	ENST00000531733	ABCC1	P33527	1531 aa		34.44	■■■■□ 3.1
FDFT1-220	ENST00000531733	MYT1L	Q9UL68	1186 aa		34.43	■■■■□ 3.1
FDFT1-220	ENST00000531733	MLH3	Q9UHC1	1453 aa		34.4	■■■■□ 3.1
FDFT1-220	ENST00000531733	ITSN2	Q9NZM3	1697 aa		34.4	■■■■□ 3.1
FDFT1-220	ENST00000531733	RERE	Q9P2R6	1566 aa		34.39	■■■■□ 3.1
FDFT1-220	ENST00000531733	CDC42BPA	Q5VT25	1732 aa		34.38	■■■■□ 3.09
FDFT1-220	ENST00000531733	PREX1	Q8TCU6	1659 aa		34.38	■■■■□ 3.09
FDFT1-220	ENST00000531733	FYCO1	Q9BQS8	1478 aa		34.36	■■■■□ 3.09
FDFT1-220	ENST00000531733	KIDINS220	Q9ULH0	1771 aa		34.31	■■■■□ 3.08
FDFT1-220	ENST00000531733	AGL	P35573	1532 aa		34.28	■■■■□ 3.08
FDFT1-220	ENST00000531733	SAMD9L	Q8IVG5	1584 aa		34.27	■■■■□ 3.08
FDFT1-220	ENST00000531733	C3	P01024	1663 aa		34.26	■■■■□ 3.08
FDFT1-220	ENST00000531733	CERK	Q8TCT0	537 aa		34.25	■■■■□ 3.07
FDFT1-220	ENST00000531733	ZNF777	Q9ULD5	760 aa	Predicted RBP	34.25	■■■■□ 3.07
FDFT1-220	ENST00000531733	STRC	Q7RTU9	1775 aa		34.25	■■■■□ 3.07
FDFT1-220	ENST00000531733	GPATCH8	Q9UKJ3	1502 aa	Known RBP	34.25	■■■■□ 3.07
FDFT1-220	ENST00000531733	UHRF1BP1	Q6BDS2	1440 aa		34.22	■■■■□ 3.07
FDFT1-220	ENST00000531733	SYCP2	Q9BX26	1530 aa		34.21	■■■■□ 3.07
FDFT1-220	ENST00000531733	SETD1B	Q9UPS6	1966 aa	Known RBP	34.19	■■■■□ 3.06
FDFT1-220	ENST00000531733	HNRNPM	P52272	730 aa	Known RBP eCLIP	34.17	■■■■□ 3.06
FDFT1-220	ENST00000531733	ESF1	Q9H501	851 aa	Known RBP	34.11	■■■■□ 3.05
FDFT1-220	ENST00000531733	SPAG9	O60271	1321 aa	Known RBP	34.1	■■■■□ 3.05
FDFT1-220	ENST00000531733	SUPT6H	Q7KZ85	1726 aa	Known RBP	34.07	■■■■□ 3.05
FDFT1-220	ENST00000531733	CFDP1	Q9UEE9	299 aa	Predicted RBP	34.07	■■■■□ 3.04
FDFT1-220	ENST00000531733	ATP7A	Q04656	1500 aa		34.06	■■■■□ 3.04
FDFT1-220	ENST00000531733	CCNB3	Q8WWL7	1395 aa		34.06	■■■■□ 3.04
FDFT1-220	ENST00000531733	CNTLN	Q9NXG0	1405 aa		34.05	■■■■□ 3.04
FDFT1-220	ENST00000531733	KIAA1107	Q9UPP5	1409 aa		34.05	■■■■□ 3.04
FDFT1-220	ENST00000531733	INO80	Q9ULG1	1556 aa	Predicted RBP	34.05	■■■■□ 3.04
FDFT1-220	ENST00000531733	DMRT2	Q9Y5R5	561 aa		34.04	■■■■□ 3.04
FDFT1-220	ENST00000531733	MTUS2	Q5JR59	1369 aa		34.03	■■■■□ 3.04
FDFT1-220	ENST00000531733	PLXNC1	O60486	1568 aa		34.01	■■■■□ 3.03
FDFT1-220	ENST00000531733	PLEKHH2	Q8IVE3	1493 aa		34	■■■■□ 3.03
FDFT1-220	ENST00000531733	ZNF644	Q9H582	1327 aa	Predicted RBP	34	■■■■□ 3.03
FDFT1-220	ENST00000531733	MROH2A	A6NES4	1674 aa		33.99	■■■■□ 3.03
FDFT1-220	ENST00000531733	TIAM1	Q13009	1591 aa		33.98	■■■■□ 3.03
FDFT1-220	ENST00000531733	PTPRT	O14522	1441 aa		33.98	■■■■□ 3.03
FDFT1-220	ENST00000531733	ZMYM3	Q14202	1370 aa		33.98	■■■■□ 3.03
FDFT1-220	ENST00000531733	A2M	P01023	1474 aa		33.97	■■■■□ 3.03
FDFT1-220	ENST00000531733	CLTC	Q00610	1675 aa	Known RBP	33.95	■■■■□ 3.03
FDFT1-220	ENST00000531733	NCOA1	Q15788	1441 aa		33.95	■■■■□ 3.02
FDFT1-220	ENST00000531733	NPAT	Q14207	1427 aa		33.93	■■■■□ 3.02
FDFT1-220	ENST00000531733	EHBP1L1	Q8N3D4	1523 aa		33.91	■■■■□ 3.02
FDFT1-220	ENST00000531733	MBD5	Q9P267	1494 aa		33.9	■■■■□ 3.02
FDFT1-220	ENST00000531733	CAMSAP1	Q5T5Y3	1602 aa		33.89	■■■■□ 3.02
FDFT1-220	ENST00000531733	CEP162	Q5TB80	1403 aa		33.88	■■■■□ 3.01
FDFT1-220	ENST00000531733	GGT6	Q6P531	493 aa		33.88	■■■■□ 3.01
FDFT1-220	ENST00000531733	LTBP4	Q8N2S1	1624 aa		33.87	■■■■□ 3.01
FDFT1-220	ENST00000531733	ADGB	Q8N7X0	1667 aa		33.84	■■■■□ 3.01
FDFT1-220	ENST00000531733	PTPRK	Q15262	1439 aa		33.84	■■■■□ 3.01
FDFT1-220	ENST00000531733	MYO3A	Q8NEV4	1616 aa		33.82	■■■■□ 3
FDFT1-220	ENST00000531733	NCKAP5L	Q9HCH0	1330 aa		33.8	■■■■□ 3
FDFT1-220	ENST00000531733	ZNF142	P52746	1687 aa	Predicted RBP	33.78	■■■■□ 3
FDFT1-220	ENST00000531733	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.75	■■■□□ 2.99
FDFT1-220	ENST00000531733	NCOA2	Q15596	1464 aa		33.75	■■■□□ 2.99
FDFT1-220	ENST00000531733	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.74	■■■□□ 2.99
FDFT1-220	ENST00000531733	DHX29	Q7Z478	1369 aa	Known RBP	33.72	■■■□□ 2.99
FDFT1-220	ENST00000531733	CAMSAP2	Q08AD1	1489 aa		33.71	■■■□□ 2.99
FDFT1-220	ENST00000531733	PPP6R1	Q9UPN7	881 aa		33.69	■■■□□ 2.98
FDFT1-220	ENST00000531733	CCDC141	Q6ZP82	1450 aa		33.69	■■■□□ 2.98
FDFT1-220	ENST00000531733	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.68	■■■□□ 2.98
FDFT1-220	ENST00000531733	PLA2R1	Q13018	1463 aa		33.68	■■■□□ 2.98
FDFT1-220	ENST00000531733	TCOF1	Q13428	1488 aa	Known RBP	33.67	■■■□□ 2.98
FDFT1-220	ENST00000531733	IQSEC2	Q5JU85	1478 aa		33.64	■■■□□ 2.98
FDFT1-220	ENST00000531733	KIF3B	O15066	747 aa		33.63	■■■□□ 2.97
FDFT1-220	ENST00000531733	PKD2	Q13563	968 aa		33.61	■■■□□ 2.97
FDFT1-220	ENST00000531733	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.61	■■■□□ 2.97
FDFT1-220	ENST00000531733	DNMT1	P26358	1616 aa	Known RBP	33.61	■■■□□ 2.97
FDFT1-220	ENST00000531733	A2ML1	A8K2U0	1454 aa		33.6	■■■□□ 2.97
FDFT1-220	ENST00000531733	DISP3	Q9P2K9	1392 aa		33.59	■■■□□ 2.97

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms