RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 CCNB3Q8WWL7 1395 aa23.49■■□□□ 1.35
NXF1-210ENST00000531579 EHBP1L1Q8N3D4 1523 aa23.48■■□□□ 1.35
NXF1-210ENST00000531579 CFDP1Q9UEE9 299 aaPredicted RBP23.47■■□□□ 1.35
NXF1-210ENST00000531579 GPATCH8Q9UKJ3 1502 aaKnown RBP23.47■■□□□ 1.35
NXF1-210ENST00000531579 TIAM1Q13009 1591 aa23.45■■□□□ 1.34
NXF1-210ENST00000531579 AEBP2Q6ZN18 517 aaPredicted RBP23.44■■□□□ 1.34
NXF1-210ENST00000531579 CDC42BPBQ9Y5S2 1711 aa23.43■■□□□ 1.34
NXF1-210ENST00000531579 ZNF777Q9ULD5 760 aaPredicted RBP23.43■■□□□ 1.34
NXF1-210ENST00000531579 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
NXF1-210ENST00000531579 MAGI2Q86UL8 1455 aa23.42■■□□□ 1.34
NXF1-210ENST00000531579 POGZQ7Z3K3 1410 aa23.42■■□□□ 1.34
NXF1-210ENST00000531579 LRRC9Q6ZRR7 1453 aa23.41■■□□□ 1.34
NXF1-210ENST00000531579 AFAP1Q8N556 730 aa23.4■■□□□ 1.34
NXF1-210ENST00000531579 FRMPD1Q5SYB0 1578 aa23.4■■□□□ 1.34
NXF1-210ENST00000531579 CDC42BPAQ5VT25 1732 aa23.39■■□□□ 1.34
NXF1-210ENST00000531579 RICTORQ6R327 1708 aa23.39■■□□□ 1.34
NXF1-210ENST00000531579 KDM4FA0A1W2PPD8 638 aa23.39■■□□□ 1.33
NXF1-210ENST00000531579 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.33
NXF1-210ENST00000531579 ZNF518AQ6AHZ1 1483 aa23.38■■□□□ 1.33
NXF1-210ENST00000531579 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
NXF1-210ENST00000531579 ZMYM4Q5VZL5 1548 aa23.36■■□□□ 1.33
NXF1-210ENST00000531579 PLEKHH2Q8IVE3 1493 aa23.36■■□□□ 1.33
NXF1-210ENST00000531579 KIAA1107Q9UPP5 1409 aa23.35■■□□□ 1.33
NXF1-210ENST00000531579 SUPT6HQ7KZ85 1726 aaKnown RBP23.35■■□□□ 1.33
NXF1-210ENST00000531579 HNRNPMP52272 730 aaKnown RBP eCLIP23.33■■□□□ 1.332e-7■□□□□ 9.4
NXF1-210ENST00000531579 MYT1LQ9UL68 1186 aa23.33■■□□□ 1.33
NXF1-210ENST00000531579 ABCC1P33527 1531 aa23.32■■□□□ 1.32
NXF1-210ENST00000531579 ARHGEF12Q9NZN5 1544 aa23.31■■□□□ 1.32
NXF1-210ENST00000531579 ZFYVE16Q7Z3T8 1539 aa23.3■■□□□ 1.32
NXF1-210ENST00000531579 RSPH4AQ5TD94 716 aa23.3■■□□□ 1.32
NXF1-210ENST00000531579 TRAPPC8Q9Y2L5 1435 aa23.3■■□□□ 1.32
NXF1-210ENST00000531579 ARID4BQ4LE39 1312 aaPredicted RBP23.3■■□□□ 1.32
NXF1-210ENST00000531579 MLH3Q9UHC1 1453 aa23.29■■□□□ 1.32
NXF1-210ENST00000531579 ITSN2Q9NZM3 1697 aa23.28■■□□□ 1.32
NXF1-210ENST00000531579 KDM5CP41229 1560 aa23.27■■□□□ 1.32
NXF1-210ENST00000531579 SAMD9LQ8IVG5 1584 aa23.27■■□□□ 1.32
NXF1-210ENST00000531579 YEATS2Q9ULM3 1422 aa23.27■■□□□ 1.32
NXF1-210ENST00000531579 ATP10AO60312 1499 aa23.27■■□□□ 1.32
NXF1-210ENST00000531579 ZNF644Q9H582 1327 aaPredicted RBP23.27■■□□□ 1.32
NXF1-210ENST00000531579 ARHGEF40Q8TER5 1519 aa23.26■■□□□ 1.31
NXF1-210ENST00000531579 SPAG9O60271 1321 aaKnown RBP23.25■■□□□ 1.31
NXF1-210ENST00000531579 MIA2Q96PC5 1412 aa23.22■■□□□ 1.31
NXF1-210ENST00000531579 SYCP2Q9BX26 1530 aa23.22■■□□□ 1.31
NXF1-210ENST00000531579 HECW2Q9P2P5 1572 aa23.2■■□□□ 1.3
NXF1-210ENST00000531579 MBD5Q9P267 1494 aa23.2■■□□□ 1.3
NXF1-210ENST00000531579 C9orf84Q5VXU9 1444 aa23.2■■□□□ 1.3
NXF1-210ENST00000531579 MYOM3Q5VTT5 1437 aa23.19■■□□□ 1.3
NXF1-210ENST00000531579 TSPY4P0CV99 314 aa23.17■■□□□ 1.3
NXF1-210ENST00000531579 TSPY10P0CW01 314 aa23.17■■□□□ 1.3
NXF1-210ENST00000531579 CAMSAP2Q08AD1 1489 aa23.15■■□□□ 1.3
NXF1-210ENST00000531579 RTEL1-TNFRSF6BF6WH68 1400 aa23.14■■□□□ 1.29
NXF1-210ENST00000531579 REREQ9P2R6 1566 aa23.11■■□□□ 1.29
NXF1-210ENST00000531579 DIP2CQ9Y2E4 1556 aa23.11■■□□□ 1.29
NXF1-210ENST00000531579 KIDINS220Q9ULH0 1771 aa23.11■■□□□ 1.29
NXF1-210ENST00000531579 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
NXF1-210ENST00000531579 BCORL1Q5H9F3 1711 aa23.11■■□□□ 1.29
NXF1-210ENST00000531579 MLECQ14165 292 aa23.1■■□□□ 1.29
NXF1-210ENST00000531579 ADAMTSL3P82987 1691 aa23.09■■□□□ 1.29
NXF1-210ENST00000531579 ATP7AQ04656 1500 aa23.08■■□□□ 1.29
NXF1-210ENST00000531579 AGLP35573 1532 aa23.08■■□□□ 1.28
NXF1-210ENST00000531579 ARHGEF5Q12774 1597 aa23.07■■□□□ 1.28
NXF1-210ENST00000531579 ABCA6Q8N139 1617 aa23.07■■□□□ 1.28
NXF1-210ENST00000531579 FGD6Q6ZV73 1430 aa23.05■■□□□ 1.28
NXF1-210ENST00000531579 INO80Q9ULG1 1556 aaPredicted RBP23.05■■□□□ 1.28
NXF1-210ENST00000531579 A2MP01023 1474 aa23.03■■□□□ 1.28
NXF1-210ENST00000531579 PTPRMP28827 1452 aa23.03■■□□□ 1.28
NXF1-210ENST00000531579 SIGLEC1Q9BZZ2 1709 aa23.02■■□□□ 1.28
NXF1-210ENST00000531579 ESF1Q9H501 851 aaKnown RBP23.02■■□□□ 1.28
NXF1-210ENST00000531579 DHX29Q7Z478 1369 aaKnown RBP23.01■■□□□ 1.27
NXF1-210ENST00000531579 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
NXF1-210ENST00000531579 TCOF1Q13428 1488 aaKnown RBP22.99■■□□□ 1.27
NXF1-210ENST00000531579 PTPN23Q9H3S7 1636 aa22.99■■□□□ 1.27
NXF1-210ENST00000531579 MADDQ8WXG6 1647 aa22.98■■□□□ 1.27
NXF1-210ENST00000531579 ADGBQ8N7X0 1667 aa22.96■■□□□ 1.27
NXF1-210ENST00000531579 FAM50AQ14320 339 aaKnown RBP22.95■■□□□ 1.26
NXF1-210ENST00000531579 MAST1Q9Y2H9 1570 aa22.94■■□□□ 1.26
NXF1-210ENST00000531579 ABCC5O15440 1437 aa22.94■■□□□ 1.26
NXF1-210ENST00000531579 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
NXF1-210ENST00000531579 PLXNC1O60486 1568 aa22.93■■□□□ 1.26
NXF1-210ENST00000531579 GGT6Q6P531 493 aa22.93■■□□□ 1.26
NXF1-210ENST00000531579 KIF3BO15066 747 aa22.91■■□□□ 1.26
NXF1-210ENST00000531579 DAPK1P53355 1430 aa22.91■■□□□ 1.26
NXF1-210ENST00000531579 CNTLNQ9NXG0 1405 aa22.91■■□□□ 1.26
NXF1-210ENST00000531579 RIMS1Q86UR5 1692 aaKnown RBP22.9■■□□□ 1.26
NXF1-210ENST00000531579 SHANK2Q9UPX8 1470 aa22.9■■□□□ 1.26
NXF1-210ENST00000531579 FER1L4A9Z1Z3 1794 aa22.89■■□□□ 1.25
NXF1-210ENST00000531579 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
NXF1-210ENST00000531579 DNMT1P26358 1616 aaKnown RBP22.86■■□□□ 1.25
NXF1-210ENST00000531579 CEBPAP49715 358 aaPredicted RBP22.86■■□□□ 1.25
NXF1-210ENST00000531579 RRP7BPQ9NSQ0 103 aa22.86■■□□□ 1.25
NXF1-210ENST00000531579 ANKRD30AQ9BXX3 1397 aa22.86■■□□□ 1.25
NXF1-210ENST00000531579 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.86■■□□□ 1.25
NXF1-210ENST00000531579 CHIC2Q9UKJ5 165 aa22.84■■□□□ 1.25
NXF1-210ENST00000531579 ZMYM3Q14202 1370 aa22.83■■□□□ 1.25
NXF1-210ENST00000531579 KIF15Q9NS87 1388 aa22.82■■□□□ 1.24
NXF1-210ENST00000531579 DUOX2Q9NRD8 1548 aa22.82■■□□□ 1.24
NXF1-210ENST00000531579 NCOA1Q15788 1441 aa22.81■■□□□ 1.24
NXF1-210ENST00000531579 WASHC2CQ9Y4E1 1318 aa22.81■■□□□ 1.24
NXF1-210ENST00000531579 CROCC2H7BZ55 1655 aa22.78■■□□□ 1.24
NXF1-210ENST00000531579 ERBINQ96RT1 1412 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms