RNA–Protein interactions for RNA: ENST00000531478.5

ABCA7-215, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 3

Gene ABCA7, Length 725 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-215ENST00000531478 SCAPERQ9BY12 1400 aa31.79■■■□□ 2.68
ABCA7-215ENST00000531478 ARID4BQ4LE39 1312 aaPredicted RBP31.75■■■□□ 2.67
ABCA7-215ENST00000531478 CDC42BPBQ9Y5S2 1711 aa31.72■■■□□ 2.67
ABCA7-215ENST00000531478 ZMYM4Q5VZL5 1548 aa31.71■■■□□ 2.67
ABCA7-215ENST00000531478 ARHGEF40Q8TER5 1519 aa31.71■■■□□ 2.67
ABCA7-215ENST00000531478 POGZQ7Z3K3 1410 aa31.7■■■□□ 2.67
ABCA7-215ENST00000531478 PREX2Q70Z35 1606 aa31.7■■■□□ 2.66
ABCA7-215ENST00000531478 ZFYVE16Q7Z3T8 1539 aa31.69■■■□□ 2.66
ABCA7-215ENST00000531478 MTUS2Q5JR59 1369 aa31.68■■■□□ 2.66
ABCA7-215ENST00000531478 MAGI2Q86UL8 1455 aa31.68■■■□□ 2.66
ABCA7-215ENST00000531478 CDC42BPAQ5VT25 1732 aa31.66■■■□□ 2.66
ABCA7-215ENST00000531478 MYT1LQ9UL68 1186 aa31.64■■■□□ 2.66
ABCA7-215ENST00000531478 ZNF518AQ6AHZ1 1483 aa31.62■■■□□ 2.65
ABCA7-215ENST00000531478 TIAM1Q13009 1591 aa31.6■■■□□ 2.65
ABCA7-215ENST00000531478 YEATS2Q9ULM3 1422 aa31.6■■■□□ 2.65
ABCA7-215ENST00000531478 BCORL1Q5H9F3 1711 aa31.6■■■□□ 2.65
ABCA7-215ENST00000531478 KANK4Q5T7N3 995 aaPredicted RBP31.58■■■□□ 2.65
ABCA7-215ENST00000531478 ZNF777Q9ULD5 760 aaPredicted RBP31.58■■■□□ 2.65
ABCA7-215ENST00000531478 ADAMTSL3P82987 1691 aa31.57■■■□□ 2.65
ABCA7-215ENST00000531478 CCNB3Q8WWL7 1395 aa31.56■■■□□ 2.64
ABCA7-215ENST00000531478 APLP2Q06481 763 aa31.55■■■□□ 2.64
ABCA7-215ENST00000531478 AFAP1Q8N556 730 aa31.55■■■□□ 2.64
ABCA7-215ENST00000531478 EHBP1L1Q8N3D4 1523 aa31.54■■■□□ 2.64
ABCA7-215ENST00000531478 ITSN2Q9NZM3 1697 aa31.54■■■□□ 2.64
ABCA7-215ENST00000531478 ABCC1P33527 1531 aa31.53■■■□□ 2.64
ABCA7-215ENST00000531478 MAP3K1Q13233 1512 aa31.53■■■□□ 2.64
ABCA7-215ENST00000531478 GPATCH8Q9UKJ3 1502 aaKnown RBP31.52■■■□□ 2.64
ABCA7-215ENST00000531478 ATP10AO60312 1499 aa31.52■■■□□ 2.64
ABCA7-215ENST00000531478 LRRC9Q6ZRR7 1453 aa31.51■■■□□ 2.63
ABCA7-215ENST00000531478 KDM5CP41229 1560 aa31.51■■■□□ 2.63
ABCA7-215ENST00000531478 CFDP1Q9UEE9 299 aaPredicted RBP31.5■■■□□ 2.63
ABCA7-215ENST00000531478 HECW2Q9P2P5 1572 aa31.5■■■□□ 2.63
ABCA7-215ENST00000531478 MADDQ8WXG6 1647 aa31.49■■■□□ 2.63
ABCA7-215ENST00000531478 C9orf84Q5VXU9 1444 aa31.48■■■□□ 2.63
ABCA7-215ENST00000531478 PTPRMP28827 1452 aa31.46■■■□□ 2.63
ABCA7-215ENST00000531478 MLECQ14165 292 aa31.45■■■□□ 2.63
ABCA7-215ENST00000531478 SAMD9LQ8IVG5 1584 aa31.45■■■□□ 2.63
ABCA7-215ENST00000531478 TRAPPC8Q9Y2L5 1435 aa31.45■■■□□ 2.63
ABCA7-215ENST00000531478 ARHGEF12Q9NZN5 1544 aa31.44■■■□□ 2.62
ABCA7-215ENST00000531478 RIMS1Q86UR5 1692 aaKnown RBP31.44■■■□□ 2.62
ABCA7-215ENST00000531478 NCOA2Q15596 1464 aa31.43■■■□□ 2.62
ABCA7-215ENST00000531478 PLEKHH2Q8IVE3 1493 aa31.42■■■□□ 2.62
ABCA7-215ENST00000531478 SIGLEC1Q9BZZ2 1709 aa31.42■■■□□ 2.62
ABCA7-215ENST00000531478 SUPT6HQ7KZ85 1726 aaKnown RBP31.41■■■□□ 2.62
ABCA7-215ENST00000531478 MLH3Q9UHC1 1453 aa31.41■■■□□ 2.62
ABCA7-215ENST00000531478 SYCP2Q9BX26 1530 aa31.39■■■□□ 2.62
ABCA7-215ENST00000531478 HNRNPMP52272 730 aaKnown RBP eCLIP31.38■■■□□ 2.61
ABCA7-215ENST00000531478 DIP2CQ9Y2E4 1556 aa31.38■■■□□ 2.61
ABCA7-215ENST00000531478 FER1L4A9Z1Z3 1794 aa31.36■■■□□ 2.61
ABCA7-215ENST00000531478 ABCA6Q8N139 1617 aa31.35■■■□□ 2.61
ABCA7-215ENST00000531478 KIAA1107Q9UPP5 1409 aa31.34■■■□□ 2.61
ABCA7-215ENST00000531478 SPAG9O60271 1321 aaKnown RBP31.33■■■□□ 2.61
ABCA7-215ENST00000531478 ZNF644Q9H582 1327 aaPredicted RBP31.33■■■□□ 2.61
ABCA7-215ENST00000531478 PLPPR3Q6T4P5 718 aa31.33■■■□□ 2.61
ABCA7-215ENST00000531478 KIDINS220Q9ULH0 1771 aa31.33■■■□□ 2.61
ABCA7-215ENST00000531478 REREQ9P2R6 1566 aa31.3■■■□□ 2.6
ABCA7-215ENST00000531478 ATP7AQ04656 1500 aa31.24■■■□□ 2.59
ABCA7-215ENST00000531478 PPARGC1BQ86YN6 1023 aaKnown RBP31.23■■■□□ 2.59
ABCA7-215ENST00000531478 ESF1Q9H501 851 aaKnown RBP31.23■■■□□ 2.59
ABCA7-215ENST00000531478 AGLP35573 1532 aa31.2■■■□□ 2.59
ABCA7-215ENST00000531478 INO80Q9ULG1 1556 aaPredicted RBP31.18■■■□□ 2.58
ABCA7-215ENST00000531478 MYOM3Q5VTT5 1437 aa31.17■■■□□ 2.58
ABCA7-215ENST00000531478 CAMSAP2Q08AD1 1489 aa31.16■■■□□ 2.58
ABCA7-215ENST00000531478 MBD5Q9P267 1494 aa31.14■■■□□ 2.57
ABCA7-215ENST00000531478 RSPH4AQ5TD94 716 aa31.13■■■□□ 2.57
ABCA7-215ENST00000531478 ADGBQ8N7X0 1667 aa31.12■■■□□ 2.57
ABCA7-215ENST00000531478 A2MP01023 1474 aa31.1■■■□□ 2.57
ABCA7-215ENST00000531478 MIA2Q96PC5 1412 aa31.1■■■□□ 2.57
ABCA7-215ENST00000531478 CCDC141Q6ZP82 1450 aa31.09■■■□□ 2.57
ABCA7-215ENST00000531478 CEBPAP49715 358 aaPredicted RBP31.08■■■□□ 2.57
ABCA7-215ENST00000531478 RTEL1-TNFRSF6BF6WH68 1400 aa31.07■■■□□ 2.57
ABCA7-215ENST00000531478 LMTK3Q96Q04 1460 aa31.06■■■□□ 2.56
ABCA7-215ENST00000531478 TSPY4P0CV99 314 aa31.05■■■□□ 2.56
ABCA7-215ENST00000531478 TSPY10P0CW01 314 aa31.05■■■□□ 2.56
ABCA7-215ENST00000531478 CNTLNQ9NXG0 1405 aa31.03■■■□□ 2.56
ABCA7-215ENST00000531478 ARHGEF5Q12774 1597 aa31.03■■■□□ 2.56
ABCA7-215ENST00000531478 PLXNC1O60486 1568 aa31.02■■■□□ 2.56
ABCA7-215ENST00000531478 FGD6Q6ZV73 1430 aa31.01■■■□□ 2.55
ABCA7-215ENST00000531478 C3P01024 1663 aa31■■■□□ 2.55
ABCA7-215ENST00000531478 PREX1Q8TCU6 1659 aa31■■■□□ 2.55
ABCA7-215ENST00000531478 SETD1BQ9UPS6 1966 aaKnown RBP31■■■□□ 2.55
ABCA7-215ENST00000531478 GGT6Q6P531 493 aa30.99■■■□□ 2.55
ABCA7-215ENST00000531478 HSPA2P54652 639 aa30.97■■■□□ 2.55
ABCA7-215ENST00000531478 PTPN23Q9H3S7 1636 aa30.97■■■□□ 2.55
ABCA7-215ENST00000531478 DHX29Q7Z478 1369 aaKnown RBP30.94■■■□□ 2.54
ABCA7-215ENST00000531478 MROH2AA6NES4 1674 aa30.94■■■□□ 2.54
ABCA7-215ENST00000531478 FAM50AQ14320 339 aaKnown RBP30.92■■■□□ 2.54
ABCA7-215ENST00000531478 CLTCQ00610 1675 aaKnown RBP30.92■■■□□ 2.54
ABCA7-215ENST00000531478 UHRF1BP1Q6BDS2 1440 aa30.91■■■□□ 2.54
ABCA7-215ENST00000531478 TCOF1Q13428 1488 aaKnown RBP30.91■■■□□ 2.54
ABCA7-215ENST00000531478 PPP6R1Q9UPN7 881 aa30.9■■■□□ 2.54
ABCA7-215ENST00000531478 KIF3BO15066 747 aa30.88■■■□□ 2.53
ABCA7-215ENST00000531478 ZMYM3Q14202 1370 aa30.87■■■□□ 2.53
ABCA7-215ENST00000531478 ABCC5O15440 1437 aa30.86■■■□□ 2.53
ABCA7-215ENST00000531478 MAST1Q9Y2H9 1570 aa30.86■■■□□ 2.53
ABCA7-215ENST00000531478 DAPK1P53355 1430 aa30.8■■■□□ 2.52
ABCA7-215ENST00000531478 CHIC2Q9UKJ5 165 aa30.79■■■□□ 2.52
ABCA7-215ENST00000531478 NPATQ14207 1427 aa30.79■■■□□ 2.52
ABCA7-215ENST00000531478 CROCC2H7BZ55 1655 aa30.76■■■□□ 2.51
ABCA7-215ENST00000531478 DNMT1P26358 1616 aaKnown RBP30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms