RNA–Protein interactions for RNA: ENST00000531184.5

GSDMD-211, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,213 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-211ENST00000531184 FYCO1Q9BQS8 1478 aa28.67■■■□□ 2.18
GSDMD-211ENST00000531184 CDK13Q14004 1512 aaKnown RBP28.66■■■□□ 2.18
GSDMD-211ENST00000531184 RTL5Q5HYW3 569 aaPredicted RBP28.66■■■□□ 2.18
GSDMD-211ENST00000531184 EPRSP07814 1512 aaKnown RBP28.65■■■□□ 2.18
GSDMD-211ENST00000531184 LRRIQ1Q96JM4 1722 aa28.61■■■□□ 2.17
GSDMD-211ENST00000531184 ASXL2Q76L83 1435 aa28.61■■■□□ 2.17
GSDMD-211ENST00000531184 PAK3O75914 559 aaPredicted RBP28.61■■■□□ 2.17
GSDMD-211ENST00000531184 MAPKBP1O60336 1514 aa28.58■■■□□ 2.17
GSDMD-211ENST00000531184 PPP1R15AO75807 674 aaPredicted RBP28.58■■■□□ 2.17
GSDMD-211ENST00000531184 PPP4R2Q9NY27 417 aa28.58■■■□□ 2.17
GSDMD-211ENST00000531184 DDX10Q13206 875 aaKnown RBP28.57■■■□□ 2.16
GSDMD-211ENST00000531184 RTN4Q9NQC3 1192 aaKnown RBP28.55■■■□□ 2.16
GSDMD-211ENST00000531184 PLEKHD1A6NEE1 506 aa28.54■■■□□ 2.16
GSDMD-211ENST00000531184 CCDC18Q5T9S5 1454 aa28.52■■■□□ 2.16
GSDMD-211ENST00000531184 TRHP20396 242 aaPredicted RBP28.51■■■□□ 2.15
GSDMD-211ENST00000531184 WDR7Q9Y4E6 1490 aa28.51■■■□□ 2.15
GSDMD-211ENST00000531184 C11orf95C9JLR9 678 aaPredicted RBP28.49■■■□□ 2.15
GSDMD-211ENST00000531184 ANP32CO43423 234 aa28.48■■■□□ 2.15
GSDMD-211ENST00000531184 EIF5BO60841 1220 aaKnown RBP28.47■■■□□ 2.15
GSDMD-211ENST00000531184 WASHC2AQ641Q2 1341 aa28.47■■■□□ 2.15
GSDMD-211ENST00000531184 PKNOX2Q96KN3 472 aa28.47■■■□□ 2.15
GSDMD-211ENST00000531184 FAM69CQ0P6D2 419 aa28.46■■■□□ 2.15
GSDMD-211ENST00000531184 MAGI3Q5TCQ9 1506 aa28.44■■■□□ 2.14
GSDMD-211ENST00000531184 ABCC10Q5T3U5 1492 aa28.43■■■□□ 2.14
GSDMD-211ENST00000531184 IRX6P78412 446 aaPredicted RBP28.42■■■□□ 2.14
GSDMD-211ENST00000531184 IPO9Q96P70 1041 aaKnown RBP28.41■■■□□ 2.14
GSDMD-211ENST00000531184 KANK4Q5T7N3 995 aaPredicted RBP28.41■■■□□ 2.14
GSDMD-211ENST00000531184 TIAM1Q13009 1591 aa28.4■■■□□ 2.14
GSDMD-211ENST00000531184 DIP2BQ9P265 1576 aa28.39■■■□□ 2.13
GSDMD-211ENST00000531184 TROQ12816 1431 aaPredicted RBP28.38■■■□□ 2.13
GSDMD-211ENST00000531184 MTUS2Q5JR59 1369 aa28.38■■■□□ 2.13
GSDMD-211ENST00000531184 CFAP43Q8NDM7 1665 aa28.35■■■□□ 2.13
GSDMD-211ENST00000531184 WASHC2CQ9Y4E1 1318 aa28.34■■■□□ 2.13
GSDMD-211ENST00000531184 ANP32AP39687 249 aaKnown RBP28.34■■■□□ 2.13
GSDMD-211ENST00000531184 KIF13AQ9H1H9 1805 aa28.34■■■□□ 2.13
GSDMD-211ENST00000531184 ZBTB47Q9UFB7 747 aaPredicted RBP28.32■■■□□ 2.12
GSDMD-211ENST00000531184 MAP3K1Q13233 1512 aa28.32■■■□□ 2.12
GSDMD-211ENST00000531184 USP35Q9P2H5 1018 aa28.31■■■□□ 2.12
GSDMD-211ENST00000531184 RRBP1Q9P2E9 1410 aaKnown RBP28.31■■■□□ 2.12
GSDMD-211ENST00000531184 LRRC9Q6ZRR7 1453 aa28.3■■■□□ 2.12
GSDMD-211ENST00000531184 KIF14Q15058 1648 aa28.3■■■□□ 2.12
GSDMD-211ENST00000531184 GLI2P10070 1586 aa28.27■■■□□ 2.12
GSDMD-211ENST00000531184 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.27■■■□□ 2.12
GSDMD-211ENST00000531184 EHBP1L1Q8N3D4 1523 aa28.25■■■□□ 2.11
GSDMD-211ENST00000531184 HNRNPUQ00839 825 aaKnown RBP eCLIP28.24■■■□□ 2.11
GSDMD-211ENST00000531184 CD109Q6YHK3 1445 aa28.24■■■□□ 2.11
GSDMD-211ENST00000531184 TTC37Q6PGP7 1564 aa28.23■■■□□ 2.11
GSDMD-211ENST00000531184 ABCA9Q8IUA7 1624 aa28.22■■■□□ 2.11
GSDMD-211ENST00000531184 B4GALNT3Q6L9W6 998 aa28.2■■■□□ 2.11
GSDMD-211ENST00000531184 TSPOAP1O95153 1857 aa28.2■■■□□ 2.1
GSDMD-211ENST00000531184 MAP3K4Q9Y6R4 1608 aa28.19■■■□□ 2.1
GSDMD-211ENST00000531184 NCOA2Q15596 1464 aa28.16■■■□□ 2.1
GSDMD-211ENST00000531184 TIMELESSQ9UNS1 1208 aa28.14■■■□□ 2.1
GSDMD-211ENST00000531184 RSPH6AQ9H0K4 717 aa28.14■■■□□ 2.09
GSDMD-211ENST00000531184 SUPT6HQ7KZ85 1726 aaKnown RBP28.13■■■□□ 2.09
GSDMD-211ENST00000531184 CCNB3Q8WWL7 1395 aa28.11■■■□□ 2.09
GSDMD-211ENST00000531184 PLCH2O75038 1416 aa28.1■■■□□ 2.09
GSDMD-211ENST00000531184 PPRC1Q5VV67 1664 aaKnown RBP28.1■■■□□ 2.09
GSDMD-211ENST00000531184 GPATCH8Q9UKJ3 1502 aaKnown RBP28.08■■■□□ 2.09
GSDMD-211ENST00000531184 NEFMP07197 916 aa28.06■■■□□ 2.08
GSDMD-211ENST00000531184 MYO5CQ9NQX4 1742 aa28.05■■■□□ 2.08
GSDMD-211ENST00000531184 RAB3GAP2Q9H2M9 1393 aa28.05■■■□□ 2.08
GSDMD-211ENST00000531184 PHLDB1Q86UU1 1377 aa28.05■■■□□ 2.08
GSDMD-211ENST00000531184 CDC42BPAQ5VT25 1732 aa28.04■■■□□ 2.08
GSDMD-211ENST00000531184 CFDP1Q9UEE9 299 aaPredicted RBP28.04■■■□□ 2.08
GSDMD-211ENST00000531184 BRPF3Q9ULD4 1205 aa28.03■■■□□ 2.08
GSDMD-211ENST00000531184 ZNF777Q9ULD5 760 aaPredicted RBP28.03■■■□□ 2.08
GSDMD-211ENST00000531184 FANCAO15360 1455 aa28.03■■■□□ 2.08
GSDMD-211ENST00000531184 GLIPR1L2Q4G1C9 344 aa28.03■■■□□ 2.08
GSDMD-211ENST00000531184 ARHGAP5Q13017 1502 aa28.03■■■□□ 2.08
GSDMD-211ENST00000531184 CDC42BPBQ9Y5S2 1711 aa28.02■■■□□ 2.08
GSDMD-211ENST00000531184 TEX14Q8IWB6 1497 aa28.02■■■□□ 2.08
GSDMD-211ENST00000531184 EFCAB2Q5VUJ9 269 aa28.02■■■□□ 2.08
GSDMD-211ENST00000531184 PREX2Q70Z35 1606 aa28■■■□□ 2.07
GSDMD-211ENST00000531184 PPM1GO15355 546 aaPredicted RBP27.98■■■□□ 2.07
GSDMD-211ENST00000531184 ZNF644Q9H582 1327 aaPredicted RBP27.98■■■□□ 2.07
GSDMD-211ENST00000531184 MYOM3Q5VTT5 1437 aa27.96■■■□□ 2.07
GSDMD-211ENST00000531184 ARAP3Q8WWN8 1544 aa27.96■■■□□ 2.07
GSDMD-211ENST00000531184 AKNAQ7Z591 1439 aa27.95■■■□□ 2.07
GSDMD-211ENST00000531184 NEO1Q92859 1461 aa27.93■■■□□ 2.06
GSDMD-211ENST00000531184 COL17A1Q9UMD9 1497 aaPredicted RBP27.92■■■□□ 2.06
GSDMD-211ENST00000531184 ITSN2Q9NZM3 1697 aa27.92■■■□□ 2.06
GSDMD-211ENST00000531184 GSE1Q14687 1217 aa27.91■■■□□ 2.06
GSDMD-211ENST00000531184 HIRIP3Q9BW71 556 aaPredicted RBP27.9■■■□□ 2.06
GSDMD-211ENST00000531184 ADGRL1O94910 1474 aa27.89■■■□□ 2.05
GSDMD-211ENST00000531184 RAPGEF3O95398 923 aa27.88■■■□□ 2.05
GSDMD-211ENST00000531184 SCAPERQ9BY12 1400 aa27.88■■■□□ 2.05
GSDMD-211ENST00000531184 SAMD9LQ8IVG5 1584 aa27.87■■■□□ 2.05
GSDMD-211ENST00000531184 HNRNPMP52272 730 aaKnown RBP eCLIP27.87■■■□□ 2.05
GSDMD-211ENST00000531184 FAM43AQ8N2R8 423 aa27.87■■■□□ 2.05
GSDMD-211ENST00000531184 FGD6Q6ZV73 1430 aa27.87■■■□□ 2.05
GSDMD-211ENST00000531184 SIN3AQ96ST3 1273 aa27.86■■■□□ 2.05
GSDMD-211ENST00000531184 SETD5Q9C0A6 1442 aa27.86■■■□□ 2.05
GSDMD-211ENST00000531184 CFAP74Q9C0B2 1584 aa27.86■■■□□ 2.05
GSDMD-211ENST00000531184 MIA2Q96PC5 1412 aa27.86■■■□□ 2.05
GSDMD-211ENST00000531184 LAS1LQ9Y4W2 734 aaKnown RBP27.86■■■□□ 2.05
GSDMD-211ENST00000531184 ZBED9Q6R2W3 1325 aa27.85■■■□□ 2.05
GSDMD-211ENST00000531184 ARHGEF12Q9NZN5 1544 aa27.84■■■□□ 2.05
GSDMD-211ENST00000531184 CAMSAP2Q08AD1 1489 aa27.82■■■□□ 2.04
GSDMD-211ENST00000531184 KDM6BO15054 1643 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms