RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 GOLGA6L1Q8N7Z2 621 aa9.38□□□□□ -0.91
CTNND1-229ENST00000531014 TPRNQ4KMQ1 711 aa9.37□□□□□ -0.91
CTNND1-229ENST00000531014 PLB1Q6P1J6 1458 aa9.36□□□□□ -0.91
CTNND1-229ENST00000531014 WIZO95785 1651 aa9.36□□□□□ -0.91
CTNND1-229ENST00000531014 CASC1Q6TDU7 716 aa9.36□□□□□ -0.91
CTNND1-229ENST00000531014 SALL2Q9Y467 1007 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-229ENST00000531014 RSPH4AQ5TD94 716 aa9.35□□□□□ -0.91
CTNND1-229ENST00000531014 PHLDB1Q86UU1 1377 aa9.35□□□□□ -0.91
CTNND1-229ENST00000531014 USP35Q9P2H5 1018 aa9.35□□□□□ -0.91
CTNND1-229ENST00000531014 LAS1LQ9Y4W2 734 aaKnown RBP9.35□□□□□ -0.91
CTNND1-229ENST00000531014 NOP58Q9Y2X3 529 aaKnown RBP9.34□□□□□ -0.91
CTNND1-229ENST00000531014 WDR62O43379 1518 aa9.34□□□□□ -0.91
CTNND1-229ENST00000531014 DEKP35659 375 aaKnown RBP9.34□□□□□ -0.91
CTNND1-229ENST00000531014 CCNB3Q8WWL7 1395 aa9.33□□□□□ -0.92
CTNND1-229ENST00000531014 SF3B2Q13435 895 aaKnown RBP9.33□□□□□ -0.92
CTNND1-229ENST00000531014 TMC1Q8TDI8 760 aa9.33□□□□□ -0.92
CTNND1-229ENST00000531014 NCBP3Q53F19 620 aaKnown RBP9.33□□□□□ -0.92
CTNND1-229ENST00000531014 DRC7Q8IY82 874 aa9.33□□□□□ -0.92
CTNND1-229ENST00000531014 ARID3AQ99856 593 aa9.33□□□□□ -0.92
CTNND1-229ENST00000531014 KIAA2012Q0VF49 1180 aa9.32□□□□□ -0.92
CTNND1-229ENST00000531014 RAD54L2Q9Y4B4 1467 aa9.32□□□□□ -0.92
CTNND1-229ENST00000531014 WDR43Q15061 677 aaKnown RBP eCLIP9.32□□□□□ -0.923e-9■■■□□ 15.6
CTNND1-229ENST00000531014 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-229ENST00000531014 GGT6Q6P531 493 aa9.31□□□□□ -0.92
CTNND1-229ENST00000531014 GOLGA6L4A6NEF3 574 aa9.31□□□□□ -0.92
CTNND1-229ENST00000531014 APPP05067 770 aa9.31□□□□□ -0.92
CTNND1-229ENST00000531014 RAPGEF2Q9Y4G8 1499 aa9.31□□□□□ -0.92
CTNND1-229ENST00000531014 A0A0U1RQG5 324 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-229ENST00000531014 VSIG10Q8N0Z9 540 aa9.3□□□□□ -0.92
CTNND1-229ENST00000531014 SPAG9O60271 1321 aaKnown RBP9.3□□□□□ -0.92
CTNND1-229ENST00000531014 IRX6P78412 446 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-229ENST00000531014 HSP90AA2PQ14568 343 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-229ENST00000531014 PEG3Q9GZU2 1588 aa9.29□□□□□ -0.92
CTNND1-229ENST00000531014 FMN1Q68DA7 1419 aa9.29□□□□□ -0.92
CTNND1-229ENST00000531014 POLA1P09884 1462 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-229ENST00000531014 SENP3Q9H4L4 574 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-229ENST00000531014 TOM1O60784 492 aa9.28□□□□□ -0.92
CTNND1-229ENST00000531014 HSP90AB1P08238 724 aaKnown RBP9.28□□□□□ -0.92
CTNND1-229ENST00000531014 AKNAQ7Z591 1439 aa9.26□□□□□ -0.93
CTNND1-229ENST00000531014 MRS2Q9HD23 443 aa9.26□□□□□ -0.93
CTNND1-229ENST00000531014 PRM3Q9NNZ6 103 aa9.26□□□□□ -0.93
CTNND1-229ENST00000531014 DDX10Q13206 875 aaKnown RBP9.25□□□□□ -0.93
CTNND1-229ENST00000531014 HMGB2P26583 209 aaKnown RBP9.25□□□□□ -0.93
CTNND1-229ENST00000531014 WASHC2CQ9Y4E1 1318 aa9.25□□□□□ -0.93
CTNND1-229ENST00000531014 THEMISQ8N1K5 641 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-229ENST00000531014 WDR97A6NE52 1622 aa9.24□□□□□ -0.93
CTNND1-229ENST00000531014 UACAQ9BZF9 1416 aa9.24□□□□□ -0.93
CTNND1-229ENST00000531014 CLSTN1O94985 981 aa9.24□□□□□ -0.93
CTNND1-229ENST00000531014 CCDC9Q9Y3X0 531 aaKnown RBP9.24□□□□□ -0.93
CTNND1-229ENST00000531014 FGD1P98174 961 aa9.23□□□□□ -0.93
CTNND1-229ENST00000531014 CEP162Q5TB80 1403 aa9.23□□□□□ -0.93
CTNND1-229ENST00000531014 CD109Q6YHK3 1445 aa9.23□□□□□ -0.93
CTNND1-229ENST00000531014 URB2Q14146 1524 aaKnown RBP9.23□□□□□ -0.93
CTNND1-229ENST00000531014 GRIN2AQ12879 1464 aa9.23□□□□□ -0.93
CTNND1-229ENST00000531014 KIAA0586Q9BVV6 1533 aa9.22□□□□□ -0.93
CTNND1-229ENST00000531014 RSPH6AQ9H0K4 717 aa9.22□□□□□ -0.93
CTNND1-229ENST00000531014 TONSLQ96HA7 1378 aa9.21□□□□□ -0.93
CTNND1-229ENST00000531014 RRP12Q5JTH9 1297 aaKnown RBP9.21□□□□□ -0.93
CTNND1-229ENST00000531014 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.21□□□□□ -0.93
CTNND1-229ENST00000531014 ANKLE2Q86XL3 938 aa9.21□□□□□ -0.94
CTNND1-229ENST00000531014 HSCBQ8IWL3 235 aa9.21□□□□□ -0.94
CTNND1-229ENST00000531014 ZBTB7CA1YPR0 619 aa9.21□□□□□ -0.94
CTNND1-229ENST00000531014 ATF3P18847 181 aa9.21□□□□□ -0.94
CTNND1-229ENST00000531014 GOLGA6L3A6NEY3 463 aa9.21□□□□□ -0.94
CTNND1-229ENST00000531014 LMOD2Q6P5Q4 547 aa9.2□□□□□ -0.94
CTNND1-229ENST00000531014 UBAP1LF5GYI3 381 aa9.2□□□□□ -0.94
CTNND1-229ENST00000531014 CCDC18Q5T9S5 1454 aa9.19□□□□□ -0.94
CTNND1-229ENST00000531014 STK11IPQ8N1F8 1099 aa9.19□□□□□ -0.94
CTNND1-229ENST00000531014 ARHGEF11O15085 1522 aa9.19□□□□□ -0.94
CTNND1-229ENST00000531014 PATL2C9JE40 543 aaKnown RBP9.19□□□□□ -0.94
CTNND1-229ENST00000531014 ZNF771Q7L3S4 317 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-229ENST00000531014 TAOK2Q9UL54 1235 aa9.18□□□□□ -0.94
CTNND1-229ENST00000531014 PIP4K2BP78356 416 aa9.18□□□□□ -0.94
CTNND1-229ENST00000531014 ABCA10Q8WWZ4 1543 aa9.17□□□□□ -0.94
CTNND1-229ENST00000531014 GPS2Q13227 327 aa9.17□□□□□ -0.94
CTNND1-229ENST00000531014 PPP6R1Q9UPN7 881 aa9.17□□□□□ -0.94
CTNND1-229ENST00000531014 KIF3BO15066 747 aa9.17□□□□□ -0.94
CTNND1-229ENST00000531014 KCNJ4P48050 445 aa9.16□□□□□ -0.94
CTNND1-229ENST00000531014 TPM4P67936 248 aa9.16□□□□□ -0.94
CTNND1-229ENST00000531014 KIF21AQ7Z4S6 1674 aa9.16□□□□□ -0.94
CTNND1-229ENST00000531014 NAP1L2Q9ULW6 460 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-229ENST00000531014 GBP4Q96PP9 640 aa9.16□□□□□ -0.94
CTNND1-229ENST00000531014 ERICH3Q5RHP9 1530 aa9.16□□□□□ -0.94
CTNND1-229ENST00000531014 ZNF608Q9ULD9 1512 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-229ENST00000531014 FTSJ3Q8IY81 847 aaKnown RBP9.15□□□□□ -0.94
CTNND1-229ENST00000531014 SYAP1Q96A49 352 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-229ENST00000531014 TAF7LQ5H9L4 462 aa9.15□□□□□ -0.94
CTNND1-229ENST00000531014 PPP4R2Q9NY27 417 aa9.15□□□□□ -0.94
CTNND1-229ENST00000531014 RGS3P49796 1198 aa9.15□□□□□ -0.95
CTNND1-229ENST00000531014 CHMP4BQ9H444 224 aaKnown RBP9.15□□□□□ -0.95
CTNND1-229ENST00000531014 PODXL2Q9NZ53 605 aa9.14□□□□□ -0.95
CTNND1-229ENST00000531014 FANCAO15360 1455 aa9.14□□□□□ -0.95
CTNND1-229ENST00000531014 HTATSF1O43719 755 aaKnown RBP9.14□□□□□ -0.95
CTNND1-229ENST00000531014 NOM1Q5C9Z4 860 aaKnown RBP9.14□□□□□ -0.95
CTNND1-229ENST00000531014 PLEKHH2Q8IVE3 1493 aa9.14□□□□□ -0.95
CTNND1-229ENST00000531014 TPM3P06753 285 aa9.14□□□□□ -0.95
CTNND1-229ENST00000531014 POGKQ9P215 609 aa9.14□□□□□ -0.95
CTNND1-229ENST00000531014 MCCP23508 829 aa9.13□□□□□ -0.95
CTNND1-229ENST00000531014 CEP89Q96ST8 783 aa9.13□□□□□ -0.95
CTNND1-229ENST00000531014 DENND4BO75064 1496 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms