RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
CTNND1-228ENST00000531007 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
CTNND1-228ENST00000531007 EHBP1L1Q8N3D4 1523 aa15.11■□□□□ 0.01
CTNND1-228ENST00000531007 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
CTNND1-228ENST00000531007 UHRF1BP1LA0JNW5 1464 aa15.1■□□□□ 0.01
CTNND1-228ENST00000531007 PLB1Q6P1J6 1458 aa15.1■□□□□ 0.01
CTNND1-228ENST00000531007 CHRDL2Q6WN34 429 aa15.1■□□□□ 0.01
CTNND1-228ENST00000531007 KANK4Q5T7N3 995 aaPredicted RBP15.09■□□□□ 0.01
CTNND1-228ENST00000531007 LRRIQ1Q96JM4 1722 aa15.08■□□□□ 0
CTNND1-228ENST00000531007 PPARGC1BQ86YN6 1023 aaKnown RBP15.07■□□□□ 0
CTNND1-228ENST00000531007 ABCC2Q92887 1545 aa15.07■□□□□ 0
CTNND1-228ENST00000531007 ERCC6L2Q5T890 1561 aa15.07■□□□□ 0
CTNND1-228ENST00000531007 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
CTNND1-228ENST00000531007 SUPT6HQ7KZ85 1726 aaKnown RBP15.04■□□□□ -0
CTNND1-228ENST00000531007 TTBK1Q5TCY1 1321 aaPredicted RBP15.04■□□□□ -0
CTNND1-228ENST00000531007 PCGF6Q9BYE7 350 aa15.03■□□□□ -0
CTNND1-228ENST00000531007 CDK13Q14004 1512 aaKnown RBP15.02■□□□□ -0
CTNND1-228ENST00000531007 ATP10BO94823 1461 aa15.02■□□□□ -0
CTNND1-228ENST00000531007 RRBP1Q9P2E9 1410 aaKnown RBP15.02■□□□□ -0
CTNND1-228ENST00000531007 TROQ12816 1431 aaPredicted RBP15.01□□□□□ -0.01
CTNND1-228ENST00000531007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15□□□□□ -0.01
CTNND1-228ENST00000531007 PLEKHD1A6NEE1 506 aa15□□□□□ -0.01
CTNND1-228ENST00000531007 PITPNM1O00562 1244 aa15□□□□□ -0.01
CTNND1-228ENST00000531007 KDM5BQ9UGL1 1544 aa14.99□□□□□ -0.01
CTNND1-228ENST00000531007 NCOA2Q15596 1464 aa14.99□□□□□ -0.01
CTNND1-228ENST00000531007 ADCY10Q96PN6 1610 aa14.98□□□□□ -0.01
CTNND1-228ENST00000531007 CCNB3Q8WWL7 1395 aa14.98□□□□□ -0.01
CTNND1-228ENST00000531007 MAGI3Q5TCQ9 1506 aa14.97□□□□□ -0.01
CTNND1-228ENST00000531007 SPDYE1Q8NFV5 336 aaPredicted RBP14.96□□□□□ -0.01
CTNND1-228ENST00000531007 MYOM3Q5VTT5 1437 aa14.95□□□□□ -0.02
CTNND1-228ENST00000531007 MIA2Q96PC5 1412 aa14.95□□□□□ -0.02
CTNND1-228ENST00000531007 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
CTNND1-228ENST00000531007 PHLDB1Q86UU1 1377 aa14.95□□□□□ -0.02
CTNND1-228ENST00000531007 KIF14Q15058 1648 aa14.92□□□□□ -0.02
CTNND1-228ENST00000531007 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
CTNND1-228ENST00000531007 ZCCHC11Q5TAX3 1644 aaKnown RBP14.91□□□□□ -0.02
CTNND1-228ENST00000531007 ARID3CA6NKF2 412 aa14.9□□□□□ -0.02
CTNND1-228ENST00000531007 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
CTNND1-228ENST00000531007 ITSN2Q9NZM3 1697 aa14.89□□□□□ -0.03
CTNND1-228ENST00000531007 CLEC11AQ9Y240 323 aa14.88□□□□□ -0.03
CTNND1-228ENST00000531007 TCOF1Q13428 1488 aaKnown RBP14.87□□□□□ -0.03
CTNND1-228ENST00000531007 ABCC10Q5T3U5 1492 aa14.86□□□□□ -0.03
CTNND1-228ENST00000531007 PTPN23Q9H3S7 1636 aa14.84□□□□□ -0.03
CTNND1-228ENST00000531007 WDR7Q9Y4E6 1490 aa14.83□□□□□ -0.03
CTNND1-228ENST00000531007 GPATCH8Q9UKJ3 1502 aaKnown RBP14.83□□□□□ -0.04
CTNND1-228ENST00000531007 FAM50AQ14320 339 aaKnown RBP14.81□□□□□ -0.04
CTNND1-228ENST00000531007 PIP4P2Q8N4L2 257 aa14.81□□□□□ -0.04
CTNND1-228ENST00000531007 CFDP1Q9UEE9 299 aaPredicted RBP14.8□□□□□ -0.04
CTNND1-228ENST00000531007 ARAP3Q8WWN8 1544 aa14.8□□□□□ -0.04
CTNND1-228ENST00000531007 MAPKBP1O60336 1514 aa14.79□□□□□ -0.04
CTNND1-228ENST00000531007 FXR2P51116 673 aaKnown RBP eCLIP14.79□□□□□ -0.04
CTNND1-228ENST00000531007 ASXL2Q76L83 1435 aa14.79□□□□□ -0.04
CTNND1-228ENST00000531007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.78□□□□□ -0.04
CTNND1-228ENST00000531007 CDC42BPAQ5VT25 1732 aa14.78□□□□□ -0.04
CTNND1-228ENST00000531007 PREX2Q70Z35 1606 aa14.77□□□□□ -0.04
CTNND1-228ENST00000531007 ACIN1Q9UKV3 1341 aaKnown RBP14.77□□□□□ -0.04
CTNND1-228ENST00000531007 RSPH4AQ5TD94 716 aa14.77□□□□□ -0.05
CTNND1-228ENST00000531007 PLEKHH2Q8IVE3 1493 aa14.76□□□□□ -0.05
CTNND1-228ENST00000531007 MYO5CQ9NQX4 1742 aa14.76□□□□□ -0.05
CTNND1-228ENST00000531007 PLCH2O75038 1416 aa14.75□□□□□ -0.05
CTNND1-228ENST00000531007 HRCP23327 699 aa14.75□□□□□ -0.05
CTNND1-228ENST00000531007 ABCA9Q8IUA7 1624 aa14.74□□□□□ -0.05
CTNND1-228ENST00000531007 CAMSAP2Q08AD1 1489 aa14.74□□□□□ -0.05
CTNND1-228ENST00000531007 AKNAQ7Z591 1439 aa14.74□□□□□ -0.05
CTNND1-228ENST00000531007 TTC37Q6PGP7 1564 aa14.73□□□□□ -0.05
CTNND1-228ENST00000531007 KCNH8Q96L42 1107 aa14.73□□□□□ -0.05
CTNND1-228ENST00000531007 DNMT1P26358 1616 aaKnown RBP14.73□□□□□ -0.05
CTNND1-228ENST00000531007 KIAA1107Q9UPP5 1409 aa14.72□□□□□ -0.05
CTNND1-228ENST00000531007 PRR29P0C7W0 189 aa14.71□□□□□ -0.05
CTNND1-228ENST00000531007 EFCAB2Q5VUJ9 269 aa14.71□□□□□ -0.05
CTNND1-228ENST00000531007 CDC42BPBQ9Y5S2 1711 aa14.71□□□□□ -0.05
CTNND1-228ENST00000531007 ROCK1Q13464 1354 aa14.71□□□□□ -0.06
CTNND1-228ENST00000531007 ARHGAP5Q13017 1502 aa14.71□□□□□ -0.06
CTNND1-228ENST00000531007 ARHGEF5Q12774 1597 aa14.7□□□□□ -0.06
CTNND1-228ENST00000531007 DAPK1P53355 1430 aa14.7□□□□□ -0.06
CTNND1-228ENST00000531007 STAG3Q9UJ98 1225 aa14.7□□□□□ -0.06
CTNND1-228ENST00000531007 SETD5Q9C0A6 1442 aa14.69□□□□□ -0.06
CTNND1-228ENST00000531007 SHANK2Q9UPX8 1470 aa14.69□□□□□ -0.06
CTNND1-228ENST00000531007 GLI2P10070 1586 aa14.68□□□□□ -0.06
CTNND1-228ENST00000531007 HFM1A2PYH4 1435 aa14.68□□□□□ -0.06
CTNND1-228ENST00000531007 ITGAEP38570 1179 aa14.68□□□□□ -0.06
CTNND1-228ENST00000531007 ABCC5O15440 1437 aa14.67□□□□□ -0.06
CTNND1-228ENST00000531007 SAMD9LQ8IVG5 1584 aa14.66□□□□□ -0.06
CTNND1-228ENST00000531007 CFAP74Q9C0B2 1584 aa14.66□□□□□ -0.06
CTNND1-228ENST00000531007 ZNF777Q9ULD5 760 aaPredicted RBP14.66□□□□□ -0.06
CTNND1-228ENST00000531007 ADGRL2O95490 1459 aa14.65□□□□□ -0.06
CTNND1-228ENST00000531007 TSPY4P0CV99 314 aa14.65□□□□□ -0.06
CTNND1-228ENST00000531007 TSPY10P0CW01 314 aa14.65□□□□□ -0.06
CTNND1-228ENST00000531007 ZEB1P37275 1124 aaPredicted RBP14.65□□□□□ -0.06
CTNND1-228ENST00000531007 PTPRKQ15262 1439 aa14.65□□□□□ -0.06
CTNND1-228ENST00000531007 ZNF644Q9H582 1327 aaPredicted RBP14.65□□□□□ -0.06
CTNND1-228ENST00000531007 CCDC141Q6ZP82 1450 aa14.64□□□□□ -0.07
CTNND1-228ENST00000531007 MBD5Q9P267 1494 aa14.64□□□□□ -0.07
CTNND1-228ENST00000531007 PROM2Q8N271 834 aa14.64□□□□□ -0.07
CTNND1-228ENST00000531007 CD109Q6YHK3 1445 aa14.64□□□□□ -0.07
CTNND1-228ENST00000531007 CLSPNQ9HAW4 1339 aa14.64□□□□□ -0.07
CTNND1-228ENST00000531007 CROCC2H7BZ55 1655 aa14.63□□□□□ -0.07
CTNND1-228ENST00000531007 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
CTNND1-228ENST00000531007 FANCAO15360 1455 aa14.63□□□□□ -0.07
CTNND1-228ENST00000531007 ANKRD30AQ9BXX3 1397 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms