RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 AKNAQ7Z591 1439 aa18.83■□□□□ 0.61
LTBP3-219ENST00000530990 SUPT6HQ7KZ85 1726 aaKnown RBP18.83■□□□□ 0.61
LTBP3-219ENST00000530990 MAP3K1Q13233 1512 aa18.83■□□□□ 0.6
LTBP3-219ENST00000530990 ITSN2Q9NZM3 1697 aa18.8■□□□□ 0.6
LTBP3-219ENST00000530990 ADGRL1O94910 1474 aa18.8■□□□□ 0.6
LTBP3-219ENST00000530990 LRRC9Q6ZRR7 1453 aa18.79■□□□□ 0.6
LTBP3-219ENST00000530990 GPATCH8Q9UKJ3 1502 aaKnown RBP18.78■□□□□ 0.6
LTBP3-219ENST00000530990 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.6
LTBP3-219ENST00000530990 NCOA2Q15596 1464 aa18.77■□□□□ 0.59
LTBP3-219ENST00000530990 ABCC1P33527 1531 aa18.76■□□□□ 0.59
LTBP3-219ENST00000530990 SAMD9LQ8IVG5 1584 aa18.76■□□□□ 0.59
LTBP3-219ENST00000530990 EFCAB2Q5VUJ9 269 aa18.75■□□□□ 0.59
LTBP3-219ENST00000530990 CCNB3Q8WWL7 1395 aa18.75■□□□□ 0.59
LTBP3-219ENST00000530990 POGZQ7Z3K3 1410 aa18.74■□□□□ 0.59
LTBP3-219ENST00000530990 RAPGEF3O95398 923 aa18.74■□□□□ 0.59
LTBP3-219ENST00000530990 ZMYM4Q5VZL5 1548 aa18.74■□□□□ 0.59
LTBP3-219ENST00000530990 SCAPERQ9BY12 1400 aa18.74■□□□□ 0.59
LTBP3-219ENST00000530990 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
LTBP3-219ENST00000530990 ARHGEF40Q8TER5 1519 aa18.71■□□□□ 0.59
LTBP3-219ENST00000530990 SYCP2Q9BX26 1530 aa18.7■□□□□ 0.58
LTBP3-219ENST00000530990 KDM5CP41229 1560 aa18.7■□□□□ 0.58
LTBP3-219ENST00000530990 ARHGEF12Q9NZN5 1544 aa18.69■□□□□ 0.58
LTBP3-219ENST00000530990 APLP2Q06481 763 aa18.68■□□□□ 0.58
LTBP3-219ENST00000530990 ZNF518AQ6AHZ1 1483 aa18.68■□□□□ 0.58
LTBP3-219ENST00000530990 ZFYVE16Q7Z3T8 1539 aa18.67■□□□□ 0.58
LTBP3-219ENST00000530990 CFDP1Q9UEE9 299 aaPredicted RBP18.66■□□□□ 0.58
LTBP3-219ENST00000530990 HECW2Q9P2P5 1572 aa18.66■□□□□ 0.58
LTBP3-219ENST00000530990 ZNF777Q9ULD5 760 aaPredicted RBP18.65■□□□□ 0.58
LTBP3-219ENST00000530990 TRAPPC8Q9Y2L5 1435 aa18.65■□□□□ 0.58
LTBP3-219ENST00000530990 YEATS2Q9ULM3 1422 aa18.63■□□□□ 0.57
LTBP3-219ENST00000530990 PLEKHH2Q8IVE3 1493 aa18.63■□□□□ 0.57
LTBP3-219ENST00000530990 CAMSAP2Q08AD1 1489 aa18.62■□□□□ 0.57
LTBP3-219ENST00000530990 MAGI2Q86UL8 1455 aa18.62■□□□□ 0.57
LTBP3-219ENST00000530990 SIGLEC1Q9BZZ2 1709 aa18.62■□□□□ 0.57
LTBP3-219ENST00000530990 ABCA6Q8N139 1617 aa18.61■□□□□ 0.57
LTBP3-219ENST00000530990 MYOM3Q5VTT5 1437 aa18.61■□□□□ 0.57
LTBP3-219ENST00000530990 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
LTBP3-219ENST00000530990 KDM4FA0A1W2PPD8 638 aa18.6■□□□□ 0.57
LTBP3-219ENST00000530990 AFAP1Q8N556 730 aa18.6■□□□□ 0.57
LTBP3-219ENST00000530990 KIDINS220Q9ULH0 1771 aa18.6■□□□□ 0.57
LTBP3-219ENST00000530990 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
LTBP3-219ENST00000530990 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
LTBP3-219ENST00000530990 INO80Q9ULG1 1556 aaPredicted RBP18.58■□□□□ 0.56
LTBP3-219ENST00000530990 MBD5Q9P267 1494 aa18.57■□□□□ 0.56
LTBP3-219ENST00000530990 MLH3Q9UHC1 1453 aa18.57■□□□□ 0.56
LTBP3-219ENST00000530990 HNRNPMP52272 730 aaKnown RBP eCLIP18.56■□□□□ 0.56
LTBP3-219ENST00000530990 MIA2Q96PC5 1412 aa18.55■□□□□ 0.56
LTBP3-219ENST00000530990 BCORL1Q5H9F3 1711 aa18.54■□□□□ 0.56
LTBP3-219ENST00000530990 ATP7AQ04656 1500 aa18.54■□□□□ 0.56
LTBP3-219ENST00000530990 PTPN23Q9H3S7 1636 aa18.54■□□□□ 0.56
LTBP3-219ENST00000530990 ARHGEF5Q12774 1597 aa18.54■□□□□ 0.56
LTBP3-219ENST00000530990 C9orf84Q5VXU9 1444 aa18.53■□□□□ 0.56
LTBP3-219ENST00000530990 ATP10AO60312 1499 aa18.52■□□□□ 0.56
LTBP3-219ENST00000530990 CCDC141Q6ZP82 1450 aa18.52■□□□□ 0.56
LTBP3-219ENST00000530990 REREQ9P2R6 1566 aa18.51■□□□□ 0.55
LTBP3-219ENST00000530990 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
LTBP3-219ENST00000530990 MYT1LQ9UL68 1186 aa18.5■□□□□ 0.55
LTBP3-219ENST00000530990 CROCC2H7BZ55 1655 aa18.5■□□□□ 0.55
LTBP3-219ENST00000530990 ADAMTSL3P82987 1691 aa18.5■□□□□ 0.55
LTBP3-219ENST00000530990 ADGBQ8N7X0 1667 aa18.49■□□□□ 0.55
LTBP3-219ENST00000530990 SPAG9O60271 1321 aaKnown RBP18.49■□□□□ 0.55
LTBP3-219ENST00000530990 TCOF1Q13428 1488 aaKnown RBP18.48■□□□□ 0.55
LTBP3-219ENST00000530990 MADDQ8WXG6 1647 aa18.47■□□□□ 0.55
LTBP3-219ENST00000530990 ARID4BQ4LE39 1312 aaPredicted RBP18.46■□□□□ 0.55
LTBP3-219ENST00000530990 DNMT1P26358 1616 aaKnown RBP18.45■□□□□ 0.54
LTBP3-219ENST00000530990 PLXNC1O60486 1568 aa18.45■□□□□ 0.54
LTBP3-219ENST00000530990 MAST1Q9Y2H9 1570 aa18.45■□□□□ 0.54
LTBP3-219ENST00000530990 PPARGC1BQ86YN6 1023 aaKnown RBP18.44■□□□□ 0.54
LTBP3-219ENST00000530990 FER1L4A9Z1Z3 1794 aa18.44■□□□□ 0.54
LTBP3-219ENST00000530990 RTEL1-TNFRSF6BF6WH68 1400 aa18.43■□□□□ 0.54
LTBP3-219ENST00000530990 RIMS1Q86UR5 1692 aaKnown RBP18.43■□□□□ 0.54
LTBP3-219ENST00000530990 AGLP35573 1532 aa18.43■□□□□ 0.54
LTBP3-219ENST00000530990 A2MP01023 1474 aa18.4■□□□□ 0.54
LTBP3-219ENST00000530990 RSPH4AQ5TD94 716 aa18.4■□□□□ 0.54
LTBP3-219ENST00000530990 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.54
LTBP3-219ENST00000530990 DAPK1P53355 1430 aa18.39■□□□□ 0.53
LTBP3-219ENST00000530990 ABCC5O15440 1437 aa18.38■□□□□ 0.53
LTBP3-219ENST00000530990 MLECQ14165 292 aa18.36■□□□□ 0.53
LTBP3-219ENST00000530990 PTPRMP28827 1452 aa18.34■□□□□ 0.53
LTBP3-219ENST00000530990 TSPY4P0CV99 314 aa18.34■□□□□ 0.53
LTBP3-219ENST00000530990 TSPY10P0CW01 314 aa18.34■□□□□ 0.53
LTBP3-219ENST00000530990 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
LTBP3-219ENST00000530990 EIF2AK4Q9P2K8 1649 aaKnown RBP18.31■□□□□ 0.52
LTBP3-219ENST00000530990 DHX29Q7Z478 1369 aaKnown RBP18.3■□□□□ 0.52
LTBP3-219ENST00000530990 DUOX2Q9NRD8 1548 aa18.28■□□□□ 0.52
LTBP3-219ENST00000530990 CLTCQ00610 1675 aaKnown RBP18.28■□□□□ 0.52
LTBP3-219ENST00000530990 RNF17Q9BXT8 1623 aaKnown RBP18.27■□□□□ 0.52
LTBP3-219ENST00000530990 RRBP1Q9P2E9 1410 aaKnown RBP18.27■□□□□ 0.52
LTBP3-219ENST00000530990 MROH2AA6NES4 1674 aa18.27■□□□□ 0.52
LTBP3-219ENST00000530990 C3P01024 1663 aa18.27■□□□□ 0.52
LTBP3-219ENST00000530990 ADGRL2O95490 1459 aa18.26■□□□□ 0.51
LTBP3-219ENST00000530990 KIF15Q9NS87 1388 aa18.26■□□□□ 0.51
LTBP3-219ENST00000530990 PTPRKQ15262 1439 aa18.24■□□□□ 0.51
LTBP3-219ENST00000530990 CHIC2Q9UKJ5 165 aa18.24■□□□□ 0.51
LTBP3-219ENST00000530990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.24■□□□□ 0.51
LTBP3-219ENST00000530990 MROH1Q8NDA8 1641 aa18.23■□□□□ 0.51
LTBP3-219ENST00000530990 ANKRD30AQ9BXX3 1397 aa18.23■□□□□ 0.51
LTBP3-219ENST00000530990 NCOA1Q15788 1441 aa18.22■□□□□ 0.51
LTBP3-219ENST00000530990 ERBINQ96RT1 1412 aa18.22■□□□□ 0.51
LTBP3-219ENST00000530990 CNTLNQ9NXG0 1405 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms