RNA–Protein interactions for RNA: ENST00000530700.1

USH1C-209, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 403 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-209ENST00000530700 ARHGAP5Q13017 1502 aa20.74■□□□□ 0.91
USH1C-209ENST00000530700 TTC37Q6PGP7 1564 aa20.74■□□□□ 0.91
USH1C-209ENST00000530700 FANCAO15360 1455 aa20.74■□□□□ 0.91
USH1C-209ENST00000530700 FGD6Q6ZV73 1430 aa20.73■□□□□ 0.91
USH1C-209ENST00000530700 FAM50AQ14320 339 aaKnown RBP20.73■□□□□ 0.91
USH1C-209ENST00000530700 NEO1Q92859 1461 aa20.73■□□□□ 0.91
USH1C-209ENST00000530700 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.72■□□□□ 0.91
USH1C-209ENST00000530700 MAP3K4Q9Y6R4 1608 aa20.71■□□□□ 0.91
USH1C-209ENST00000530700 AKNAQ7Z591 1439 aa20.71■□□□□ 0.91
USH1C-209ENST00000530700 PLEKHH2Q8IVE3 1493 aa20.71■□□□□ 0.91
USH1C-209ENST00000530700 KIAA1107Q9UPP5 1409 aa20.7■□□□□ 0.9
USH1C-209ENST00000530700 ZNF644Q9H582 1327 aaPredicted RBP20.7■□□□□ 0.9
USH1C-209ENST00000530700 TSPY4P0CV99 314 aa20.68■□□□□ 0.9
USH1C-209ENST00000530700 TSPY10P0CW01 314 aa20.68■□□□□ 0.9
USH1C-209ENST00000530700 HNRNPMP52272 730 aaKnown RBP eCLIP20.68■□□□□ 0.9
USH1C-209ENST00000530700 RRBP1Q9P2E9 1410 aaKnown RBP20.68■□□□□ 0.9
USH1C-209ENST00000530700 ITSN2Q9NZM3 1697 aa20.67■□□□□ 0.9
USH1C-209ENST00000530700 MYO5CQ9NQX4 1742 aa20.67■□□□□ 0.9
USH1C-209ENST00000530700 SCAPERQ9BY12 1400 aa20.66■□□□□ 0.9
USH1C-209ENST00000530700 KIF13AQ9H1H9 1805 aa20.65■□□□□ 0.9
USH1C-209ENST00000530700 PREX2Q70Z35 1606 aa20.65■□□□□ 0.9
USH1C-209ENST00000530700 TRIM26Q12899 539 aaPredicted RBP20.65■□□□□ 0.9
USH1C-209ENST00000530700 ADGRL1O94910 1474 aa20.63■□□□□ 0.89
USH1C-209ENST00000530700 TCOF1Q13428 1488 aaKnown RBP20.63■□□□□ 0.89
USH1C-209ENST00000530700 CFAP74Q9C0B2 1584 aa20.63■□□□□ 0.89
USH1C-209ENST00000530700 CDC42BPAQ5VT25 1732 aa20.62■□□□□ 0.89
USH1C-209ENST00000530700 DENND4BO75064 1496 aaPredicted RBP20.61■□□□□ 0.89
USH1C-209ENST00000530700 CAMSAP2Q08AD1 1489 aa20.61■□□□□ 0.89
USH1C-209ENST00000530700 CDC42BPBQ9Y5S2 1711 aa20.6■□□□□ 0.89
USH1C-209ENST00000530700 AFAP1Q8N556 730 aa20.59■□□□□ 0.89
USH1C-209ENST00000530700 PTPN23Q9H3S7 1636 aa20.58■□□□□ 0.89
USH1C-209ENST00000530700 RAPGEF3O95398 923 aa20.58■□□□□ 0.89
USH1C-209ENST00000530700 MBD5Q9P267 1494 aa20.57■□□□□ 0.88
USH1C-209ENST00000530700 MYT1LQ9UL68 1186 aa20.57■□□□□ 0.88
USH1C-209ENST00000530700 SPAG9O60271 1321 aaKnown RBP20.56■□□□□ 0.88
USH1C-209ENST00000530700 ITGAEP38570 1179 aa20.56■□□□□ 0.88
USH1C-209ENST00000530700 TSPOAP1O95153 1857 aa20.55■□□□□ 0.88
USH1C-209ENST00000530700 SAMD9LQ8IVG5 1584 aa20.55■□□□□ 0.88
USH1C-209ENST00000530700 ZNF518AQ6AHZ1 1483 aa20.54■□□□□ 0.88
USH1C-209ENST00000530700 CCDC141Q6ZP82 1450 aa20.53■□□□□ 0.88
USH1C-209ENST00000530700 ABCC1P33527 1531 aa20.53■□□□□ 0.88
USH1C-209ENST00000530700 ARHGEF12Q9NZN5 1544 aa20.53■□□□□ 0.88
USH1C-209ENST00000530700 TRAPPC8Q9Y2L5 1435 aa20.53■□□□□ 0.88
USH1C-209ENST00000530700 PPRC1Q5VV67 1664 aaKnown RBP20.52■□□□□ 0.88
USH1C-209ENST00000530700 ABCC5O15440 1437 aa20.52■□□□□ 0.87
USH1C-209ENST00000530700 POGZQ7Z3K3 1410 aa20.52■□□□□ 0.87
USH1C-209ENST00000530700 SYCP2Q9BX26 1530 aa20.51■□□□□ 0.87
USH1C-209ENST00000530700 DAPK1P53355 1430 aa20.51■□□□□ 0.87
USH1C-209ENST00000530700 CHIC2Q9UKJ5 165 aa20.5■□□□□ 0.87
USH1C-209ENST00000530700 RTEL1-TNFRSF6BF6WH68 1400 aa20.5■□□□□ 0.87
USH1C-209ENST00000530700 ARHGEF5Q12774 1597 aa20.49■□□□□ 0.87
USH1C-209ENST00000530700 ANKRD30AQ9BXX3 1397 aa20.47■□□□□ 0.87
USH1C-209ENST00000530700 COL17A1Q9UMD9 1497 aaPredicted RBP20.47■□□□□ 0.87
USH1C-209ENST00000530700 MAGI2Q86UL8 1455 aa20.46■□□□□ 0.87
USH1C-209ENST00000530700 C9orf84Q5VXU9 1444 aa20.45■□□□□ 0.86
USH1C-209ENST00000530700 MLH3Q9UHC1 1453 aa20.45■□□□□ 0.86
USH1C-209ENST00000530700 ROCK1Q13464 1354 aa20.45■□□□□ 0.86
USH1C-209ENST00000530700 SHANK2Q9UPX8 1470 aa20.44■□□□□ 0.86
USH1C-209ENST00000530700 RRP7BPQ9NSQ0 103 aa20.43■□□□□ 0.86
USH1C-209ENST00000530700 DNMT1P26358 1616 aaKnown RBP20.42■□□□□ 0.86
USH1C-209ENST00000530700 ACIN1Q9UKV3 1341 aaKnown RBP20.41■□□□□ 0.86
USH1C-209ENST00000530700 NCOA1Q15788 1441 aa20.41■□□□□ 0.86
USH1C-209ENST00000530700 KDM6BO15054 1643 aa20.4■□□□□ 0.86
USH1C-209ENST00000530700 PTPRKQ15262 1439 aa20.4■□□□□ 0.86
USH1C-209ENST00000530700 KDM5CP41229 1560 aa20.38■□□□□ 0.85
USH1C-209ENST00000530700 PCGF6Q9BYE7 350 aa20.38■□□□□ 0.85
USH1C-209ENST00000530700 ADGRL2O95490 1459 aa20.37■□□□□ 0.85
USH1C-209ENST00000530700 MAST1Q9Y2H9 1570 aa20.36■□□□□ 0.85
USH1C-209ENST00000530700 ZMYM4Q5VZL5 1548 aa20.36■□□□□ 0.85
USH1C-209ENST00000530700 DHX29Q7Z478 1369 aaKnown RBP20.35■□□□□ 0.85
USH1C-209ENST00000530700 KIF15Q9NS87 1388 aa20.35■□□□□ 0.85
USH1C-209ENST00000530700 HRCP23327 699 aa20.34■□□□□ 0.85
USH1C-209ENST00000530700 ATP7AQ04656 1500 aa20.33■□□□□ 0.85
USH1C-209ENST00000530700 ATP10AO60312 1499 aa20.33■□□□□ 0.85
USH1C-209ENST00000530700 RICTORQ6R327 1708 aa20.33■□□□□ 0.84
USH1C-209ENST00000530700 HECW2Q9P2P5 1572 aa20.31■□□□□ 0.84
USH1C-209ENST00000530700 HFM1A2PYH4 1435 aa20.31■□□□□ 0.84
USH1C-209ENST00000530700 ZFYVE16Q7Z3T8 1539 aa20.31■□□□□ 0.84
USH1C-209ENST00000530700 FRMPD1Q5SYB0 1578 aa20.3■□□□□ 0.84
USH1C-209ENST00000530700 YEATS2Q9ULM3 1422 aa20.3■□□□□ 0.84
USH1C-209ENST00000530700 A2MP01023 1474 aa20.29■□□□□ 0.84
USH1C-209ENST00000530700 SETD5Q9C0A6 1442 aa20.28■□□□□ 0.84
USH1C-209ENST00000530700 ANKRD50Q9ULJ7 1429 aa20.28■□□□□ 0.84
USH1C-209ENST00000530700 NAIPQ13075 1403 aa20.27■□□□□ 0.84
USH1C-209ENST00000530700 DUOX2Q9NRD8 1548 aa20.27■□□□□ 0.84
USH1C-209ENST00000530700 INO80Q9ULG1 1556 aaPredicted RBP20.27■□□□□ 0.84
USH1C-209ENST00000530700 KIF3BO15066 747 aa20.27■□□□□ 0.84
USH1C-209ENST00000530700 ARID4BQ4LE39 1312 aaPredicted RBP20.27■□□□□ 0.83
USH1C-209ENST00000530700 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
USH1C-209ENST00000530700 ERBINQ96RT1 1412 aa20.26■□□□□ 0.83
USH1C-209ENST00000530700 CROCC2H7BZ55 1655 aa20.25■□□□□ 0.83
USH1C-209ENST00000530700 PLXNC1O60486 1568 aa20.25■□□□□ 0.83
USH1C-209ENST00000530700 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
USH1C-209ENST00000530700 GGT6Q6P531 493 aa20.21■□□□□ 0.83
USH1C-209ENST00000530700 TRIM52Q96A61 297 aa20.2■□□□□ 0.82
USH1C-209ENST00000530700 DIP2CQ9Y2E4 1556 aa20.2■□□□□ 0.82
USH1C-209ENST00000530700 ADGBQ8N7X0 1667 aa20.19■□□□□ 0.82
USH1C-209ENST00000530700 ARHGEF40Q8TER5 1519 aa20.18■□□□□ 0.82
USH1C-209ENST00000530700 REREQ9P2R6 1566 aa20.18■□□□□ 0.82
USH1C-209ENST00000530700 ESF1Q9H501 851 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms