RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 PLCH2O75038 1416 aa12.5□□□□□ -0.41
NUP98-217ENST00000530345 ARHGEF12Q9NZN5 1544 aa12.5□□□□□ -0.41
NUP98-217ENST00000530345 REREQ9P2R6 1566 aa12.49□□□□□ -0.41
NUP98-217ENST00000530345 C9orf84Q5VXU9 1444 aa12.49□□□□□ -0.41
NUP98-217ENST00000530345 KDM5CP41229 1560 aa12.48□□□□□ -0.41
NUP98-217ENST00000530345 CDK13Q14004 1512 aaKnown RBP12.48□□□□□ -0.41
NUP98-217ENST00000530345 ZNF518AQ6AHZ1 1483 aa12.48□□□□□ -0.41
NUP98-217ENST00000530345 ATP10AO60312 1499 aa12.47□□□□□ -0.41
NUP98-217ENST00000530345 YEATS2Q9ULM3 1422 aa12.47□□□□□ -0.41
NUP98-217ENST00000530345 CDK11AQ9UQ88 783 aaPredicted RBP12.46□□□□□ -0.41
NUP98-217ENST00000530345 SCAPERQ9BY12 1400 aa12.45□□□□□ -0.42
NUP98-217ENST00000530345 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
NUP98-217ENST00000530345 CLIP1P30622 1438 aa12.45□□□□□ -0.42
NUP98-217ENST00000530345 LRRIQ1Q96JM4 1722 aa12.44□□□□□ -0.42
NUP98-217ENST00000530345 PREX2Q70Z35 1606 aa12.44□□□□□ -0.42
NUP98-217ENST00000530345 STRCQ7RTU9 1775 aa12.43□□□□□ -0.42
NUP98-217ENST00000530345 ARHGAP5Q13017 1502 aa12.42□□□□□ -0.42
NUP98-217ENST00000530345 EFCAB2Q5VUJ9 269 aa12.42□□□□□ -0.42
NUP98-217ENST00000530345 TROQ12816 1431 aaPredicted RBP12.42□□□□□ -0.42
NUP98-217ENST00000530345 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
NUP98-217ENST00000530345 DIP2CQ9Y2E4 1556 aa12.41□□□□□ -0.42
NUP98-217ENST00000530345 C3P01024 1663 aa12.41□□□□□ -0.42
NUP98-217ENST00000530345 MROH2AA6NES4 1674 aa12.4□□□□□ -0.42
NUP98-217ENST00000530345 AGLP35573 1532 aa12.4□□□□□ -0.42
NUP98-217ENST00000530345 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.43
NUP98-217ENST00000530345 ARHGAP35Q9NRY4 1499 aa12.4□□□□□ -0.43
NUP98-217ENST00000530345 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
NUP98-217ENST00000530345 ABCA6Q8N139 1617 aa12.39□□□□□ -0.43
NUP98-217ENST00000530345 CDC42BPAQ5VT25 1732 aa12.39□□□□□ -0.43
NUP98-217ENST00000530345 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
NUP98-217ENST00000530345 UHRF1BP1Q6BDS2 1440 aa12.38□□□□□ -0.43
NUP98-217ENST00000530345 ABCC1P33527 1531 aa12.38□□□□□ -0.43
NUP98-217ENST00000530345 RANGAP1P46060 587 aaPredicted RBP12.38□□□□□ -0.43
NUP98-217ENST00000530345 HSPA2P54652 639 aa12.37□□□□□ -0.43
NUP98-217ENST00000530345 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
NUP98-217ENST00000530345 KIDINS220Q9ULH0 1771 aa12.36□□□□□ -0.43
NUP98-217ENST00000530345 CNTLNQ9NXG0 1405 aa12.36□□□□□ -0.43
NUP98-217ENST00000530345 IQSEC2Q5JU85 1478 aa12.34□□□□□ -0.43
NUP98-217ENST00000530345 MLECQ14165 292 aa12.34□□□□□ -0.43
NUP98-217ENST00000530345 SUPT6HQ7KZ85 1726 aaKnown RBP12.34□□□□□ -0.43
NUP98-217ENST00000530345 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
NUP98-217ENST00000530345 PTPRTO14522 1441 aa12.33□□□□□ -0.44
NUP98-217ENST00000530345 CASKIN1Q8WXD9 1431 aa12.32□□□□□ -0.44
NUP98-217ENST00000530345 ZNF142P52746 1687 aaPredicted RBP12.32□□□□□ -0.44
NUP98-217ENST00000530345 FYCO1Q9BQS8 1478 aa12.31□□□□□ -0.44
NUP98-217ENST00000530345 PLPPR3Q6T4P5 718 aa12.3□□□□□ -0.44
NUP98-217ENST00000530345 NPATQ14207 1427 aa12.29□□□□□ -0.44
NUP98-217ENST00000530345 TRAPPC8Q9Y2L5 1435 aa12.29□□□□□ -0.44
NUP98-217ENST00000530345 ESF1Q9H501 851 aaKnown RBP12.29□□□□□ -0.44
NUP98-217ENST00000530345 ATP1B4Q9UN42 357 aaPredicted RBP12.29□□□□□ -0.44
NUP98-217ENST00000530345 SAMD9LQ8IVG5 1584 aa12.28□□□□□ -0.44
NUP98-217ENST00000530345 ADGBQ8N7X0 1667 aa12.28□□□□□ -0.44
NUP98-217ENST00000530345 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.44
NUP98-217ENST00000530345 AFAP1Q8N556 730 aa12.27□□□□□ -0.45
NUP98-217ENST00000530345 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
NUP98-217ENST00000530345 SPATA31D1Q6ZQQ2 1576 aa12.26□□□□□ -0.45
NUP98-217ENST00000530345 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
NUP98-217ENST00000530345 MYT1LQ9UL68 1186 aa12.26□□□□□ -0.45
NUP98-217ENST00000530345 NCOA1Q15788 1441 aa12.26□□□□□ -0.45
NUP98-217ENST00000530345 ATP7AQ04656 1500 aa12.25□□□□□ -0.45
NUP98-217ENST00000530345 LTBP4Q8N2S1 1624 aa12.25□□□□□ -0.45
NUP98-217ENST00000530345 MYO3AQ8NEV4 1616 aa12.25□□□□□ -0.45
NUP98-217ENST00000530345 CEBPAP49715 358 aaPredicted RBP12.24□□□□□ -0.45
NUP98-217ENST00000530345 CLTCQ00610 1675 aaKnown RBP12.24□□□□□ -0.45
NUP98-217ENST00000530345 SYCP2Q9BX26 1530 aa12.24□□□□□ -0.45
NUP98-217ENST00000530345 CAMSAP1Q5T5Y3 1602 aa12.23□□□□□ -0.45
NUP98-217ENST00000530345 PLA2R1Q13018 1463 aa12.23□□□□□ -0.45
NUP98-217ENST00000530345 KIAA1107Q9UPP5 1409 aa12.23□□□□□ -0.45
NUP98-217ENST00000530345 FAM135AQ9P2D6 1515 aa12.22□□□□□ -0.45
NUP98-217ENST00000530345 POLR1AO95602 1720 aaPredicted RBP12.22□□□□□ -0.45
NUP98-217ENST00000530345 CEP170BQ9Y4F5 1589 aaPredicted RBP12.21□□□□□ -0.46
NUP98-217ENST00000530345 GPATCH8Q9UKJ3 1502 aaKnown RBP12.2□□□□□ -0.46
NUP98-217ENST00000530345 DISP3Q9P2K9 1392 aa12.19□□□□□ -0.46
NUP98-217ENST00000530345 SPAG9O60271 1321 aaKnown RBP12.18□□□□□ -0.46
NUP98-217ENST00000530345 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
NUP98-217ENST00000530345 A2MP01023 1474 aa12.18□□□□□ -0.46
NUP98-217ENST00000530345 ZMYM3Q14202 1370 aa12.17□□□□□ -0.46
NUP98-217ENST00000530345 EHBP1L1Q8N3D4 1523 aa12.16□□□□□ -0.46
NUP98-217ENST00000530345 TCOF1Q13428 1488 aaKnown RBP12.16□□□□□ -0.46
NUP98-217ENST00000530345 SOCS7O14512 581 aa12.15□□□□□ -0.46
NUP98-217ENST00000530345 PKD2Q13563 968 aa12.15□□□□□ -0.46
NUP98-217ENST00000530345 CCNB3Q8WWL7 1395 aa12.15□□□□□ -0.46
NUP98-217ENST00000530345 TIAM1Q13009 1591 aa12.14□□□□□ -0.47
NUP98-217ENST00000530345 PTPRKQ15262 1439 aa12.14□□□□□ -0.47
NUP98-217ENST00000530345 RTEL1-TNFRSF6BF6WH68 1400 aa12.13□□□□□ -0.47
NUP98-217ENST00000530345 A2ML1A8K2U0 1454 aa12.13□□□□□ -0.47
NUP98-217ENST00000530345 DNMT1P26358 1616 aaKnown RBP12.12□□□□□ -0.47
NUP98-217ENST00000530345 CFDP1Q9UEE9 299 aaPredicted RBP12.12□□□□□ -0.47
NUP98-217ENST00000530345 MTUS2Q5JR59 1369 aa12.12□□□□□ -0.47
NUP98-217ENST00000530345 EHMT2Q96KQ7 1210 aa12.11□□□□□ -0.47
NUP98-217ENST00000530345 ZNF777Q9ULD5 760 aaPredicted RBP12.11□□□□□ -0.47
NUP98-217ENST00000530345 CPS1P31327 1500 aa12.11□□□□□ -0.47
NUP98-217ENST00000530345 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
NUP98-217ENST00000530345 ZC3H13Q5T200 1668 aaKnown RBP12.1□□□□□ -0.47
NUP98-217ENST00000530345 DEPDC5O75140 1603 aa12.09□□□□□ -0.47
NUP98-217ENST00000530345 CEP162Q5TB80 1403 aa12.09□□□□□ -0.47
NUP98-217ENST00000530345 PZPP20742 1482 aa12.08□□□□□ -0.48
NUP98-217ENST00000530345 MBD5Q9P267 1494 aa12.08□□□□□ -0.48
NUP98-217ENST00000530345 HNRNPMP52272 730 aaKnown RBP eCLIP12.07□□□□□ -0.48
NUP98-217ENST00000530345 ARHGEF5Q12774 1597 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms