RNA–Protein interactions for RNA: ENST00000530302.1

CLINT1-209, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-209ENST00000530302 MYO5CQ9NQX4 1742 aa11.79□□□□□ -0.52
CLINT1-209ENST00000530302 ARAP3Q8WWN8 1544 aa11.79□□□□□ -0.52
CLINT1-209ENST00000530302 NEO1Q92859 1461 aa11.78□□□□□ -0.52
CLINT1-209ENST00000530302 FANCAO15360 1455 aa11.77□□□□□ -0.52
CLINT1-209ENST00000530302 CDC42BPBQ9Y5S2 1711 aa11.76□□□□□ -0.53
CLINT1-209ENST00000530302 RICTORQ6R327 1708 aa11.75□□□□□ -0.53
CLINT1-209ENST00000530302 PLCH2O75038 1416 aa11.75□□□□□ -0.53
CLINT1-209ENST00000530302 VPS8Q8N3P4 1428 aa11.75□□□□□ -0.53
CLINT1-209ENST00000530302 CFAP74Q9C0B2 1584 aa11.75□□□□□ -0.53
CLINT1-209ENST00000530302 PREX2Q70Z35 1606 aa11.75□□□□□ -0.53
CLINT1-209ENST00000530302 CDC42BPAQ5VT25 1732 aa11.74□□□□□ -0.53
CLINT1-209ENST00000530302 CDK11AQ9UQ88 783 aaPredicted RBP11.74□□□□□ -0.53
CLINT1-209ENST00000530302 AKNAQ7Z591 1439 aa11.74□□□□□ -0.53
CLINT1-209ENST00000530302 RAPGEF3O95398 923 aa11.73□□□□□ -0.53
CLINT1-209ENST00000530302 TIAM1Q13009 1591 aa11.71□□□□□ -0.53
CLINT1-209ENST00000530302 ARHGAP5Q13017 1502 aa11.71□□□□□ -0.53
CLINT1-209ENST00000530302 PHLDB1Q86UU1 1377 aa11.71□□□□□ -0.53
CLINT1-209ENST00000530302 EHBP1L1Q8N3D4 1523 aa11.7□□□□□ -0.54
CLINT1-209ENST00000530302 ADGRL1O94910 1474 aa11.7□□□□□ -0.54
CLINT1-209ENST00000530302 DENND4BO75064 1496 aaPredicted RBP11.7□□□□□ -0.54
CLINT1-209ENST00000530302 POGZQ7Z3K3 1410 aa11.69□□□□□ -0.54
CLINT1-209ENST00000530302 MTUS2Q5JR59 1369 aa11.68□□□□□ -0.54
CLINT1-209ENST00000530302 ABCC1P33527 1531 aa11.68□□□□□ -0.54
CLINT1-209ENST00000530302 ZMYM4Q5VZL5 1548 aa11.68□□□□□ -0.54
CLINT1-209ENST00000530302 ARHGEF40Q8TER5 1519 aa11.68□□□□□ -0.54
CLINT1-209ENST00000530302 ARHGEF12Q9NZN5 1544 aa11.68□□□□□ -0.54
CLINT1-209ENST00000530302 GPATCH8Q9UKJ3 1502 aaKnown RBP11.68□□□□□ -0.54
CLINT1-209ENST00000530302 SIGLEC1Q9BZZ2 1709 aa11.68□□□□□ -0.54
CLINT1-209ENST00000530302 SCAPERQ9BY12 1400 aa11.68□□□□□ -0.54
CLINT1-209ENST00000530302 SAMD9LQ8IVG5 1584 aa11.67□□□□□ -0.54
CLINT1-209ENST00000530302 KDM4FA0A1W2PPD8 638 aa11.67□□□□□ -0.54
CLINT1-209ENST00000530302 ITSN2Q9NZM3 1697 aa11.67□□□□□ -0.54
CLINT1-209ENST00000530302 YEATS2Q9ULM3 1422 aa11.66□□□□□ -0.54
CLINT1-209ENST00000530302 EFCAB2Q5VUJ9 269 aa11.65□□□□□ -0.54
CLINT1-209ENST00000530302 KDM5CP41229 1560 aa11.65□□□□□ -0.54
CLINT1-209ENST00000530302 NCOA2Q15596 1464 aa11.64□□□□□ -0.55
CLINT1-209ENST00000530302 LRRC9Q6ZRR7 1453 aa11.64□□□□□ -0.55
CLINT1-209ENST00000530302 SUPT6HQ7KZ85 1726 aaKnown RBP11.64□□□□□ -0.55
CLINT1-209ENST00000530302 KANK4Q5T7N3 995 aaPredicted RBP11.64□□□□□ -0.55
CLINT1-209ENST00000530302 SYCP2Q9BX26 1530 aa11.64□□□□□ -0.55
CLINT1-209ENST00000530302 TRAPPC8Q9Y2L5 1435 aa11.63□□□□□ -0.55
CLINT1-209ENST00000530302 MAP3K1Q13233 1512 aa11.63□□□□□ -0.55
CLINT1-209ENST00000530302 ZFYVE16Q7Z3T8 1539 aa11.63□□□□□ -0.55
CLINT1-209ENST00000530302 CCNB3Q8WWL7 1395 aa11.63□□□□□ -0.55
CLINT1-209ENST00000530302 ZNF518AQ6AHZ1 1483 aa11.62□□□□□ -0.55
CLINT1-209ENST00000530302 AFAP1Q8N556 730 aa11.61□□□□□ -0.55
CLINT1-209ENST00000530302 HECW2Q9P2P5 1572 aa11.61□□□□□ -0.55
CLINT1-209ENST00000530302 ABCA6Q8N139 1617 aa11.6□□□□□ -0.55
CLINT1-209ENST00000530302 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
CLINT1-209ENST00000530302 ZNF644Q9H582 1327 aaPredicted RBP11.6□□□□□ -0.55
CLINT1-209ENST00000530302 DIP2CQ9Y2E4 1556 aa11.59□□□□□ -0.55
CLINT1-209ENST00000530302 KIDINS220Q9ULH0 1771 aa11.59□□□□□ -0.55
CLINT1-209ENST00000530302 MAGI2Q86UL8 1455 aa11.58□□□□□ -0.56
CLINT1-209ENST00000530302 BCORL1Q5H9F3 1711 aa11.58□□□□□ -0.56
CLINT1-209ENST00000530302 CFDP1Q9UEE9 299 aaPredicted RBP11.58□□□□□ -0.56
CLINT1-209ENST00000530302 ADAMTSL3P82987 1691 aa11.58□□□□□ -0.56
CLINT1-209ENST00000530302 CAMSAP2Q08AD1 1489 aa11.57□□□□□ -0.56
CLINT1-209ENST00000530302 HNRNPMP52272 730 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLINT1-209ENST00000530302 INO80Q9ULG1 1556 aaPredicted RBP11.56□□□□□ -0.56
CLINT1-209ENST00000530302 MADDQ8WXG6 1647 aa11.56□□□□□ -0.56
CLINT1-209ENST00000530302 MBD5Q9P267 1494 aa11.56□□□□□ -0.56
CLINT1-209ENST00000530302 MLH3Q9UHC1 1453 aa11.56□□□□□ -0.56
CLINT1-209ENST00000530302 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
CLINT1-209ENST00000530302 ATP10AO60312 1499 aa11.55□□□□□ -0.56
CLINT1-209ENST00000530302 C9orf84Q5VXU9 1444 aa11.54□□□□□ -0.56
CLINT1-209ENST00000530302 PLEKHH2Q8IVE3 1493 aa11.54□□□□□ -0.56
CLINT1-209ENST00000530302 ATP7AQ04656 1500 aa11.53□□□□□ -0.56
CLINT1-209ENST00000530302 MYOM3Q5VTT5 1437 aa11.52□□□□□ -0.56
CLINT1-209ENST00000530302 HOXD11P31277 338 aaPredicted RBP11.52□□□□□ -0.57
CLINT1-209ENST00000530302 REREQ9P2R6 1566 aa11.52□□□□□ -0.57
CLINT1-209ENST00000530302 ARID4BQ4LE39 1312 aaPredicted RBP11.52□□□□□ -0.57
CLINT1-209ENST00000530302 RIMS1Q86UR5 1692 aaKnown RBP11.52□□□□□ -0.57
CLINT1-209ENST00000530302 FER1L4A9Z1Z3 1794 aa11.5□□□□□ -0.57
CLINT1-209ENST00000530302 CCDC141Q6ZP82 1450 aa11.5□□□□□ -0.57
CLINT1-209ENST00000530302 PLXNC1O60486 1568 aa11.5□□□□□ -0.57
CLINT1-209ENST00000530302 ARHGEF5Q12774 1597 aa11.5□□□□□ -0.57
CLINT1-209ENST00000530302 ADGBQ8N7X0 1667 aa11.49□□□□□ -0.57
CLINT1-209ENST00000530302 SPAG9O60271 1321 aaKnown RBP11.49□□□□□ -0.57
CLINT1-209ENST00000530302 PTPRMP28827 1452 aa11.49□□□□□ -0.57
CLINT1-209ENST00000530302 APLP2Q06481 763 aa11.48□□□□□ -0.57
CLINT1-209ENST00000530302 MLECQ14165 292 aa11.48□□□□□ -0.57
CLINT1-209ENST00000530302 MYT1LQ9UL68 1186 aa11.48□□□□□ -0.57
CLINT1-209ENST00000530302 PTPN23Q9H3S7 1636 aa11.48□□□□□ -0.57
CLINT1-209ENST00000530302 AGLP35573 1532 aa11.47□□□□□ -0.57
CLINT1-209ENST00000530302 MIA2Q96PC5 1412 aa11.47□□□□□ -0.57
CLINT1-209ENST00000530302 CROCC2H7BZ55 1655 aa11.46□□□□□ -0.57
CLINT1-209ENST00000530302 FGD6Q6ZV73 1430 aa11.46□□□□□ -0.57
CLINT1-209ENST00000530302 A2MP01023 1474 aa11.45□□□□□ -0.58
CLINT1-209ENST00000530302 TCOF1Q13428 1488 aaKnown RBP11.44□□□□□ -0.58
CLINT1-209ENST00000530302 PPARGC1BQ86YN6 1023 aaKnown RBP11.44□□□□□ -0.58
CLINT1-209ENST00000530302 MAST1Q9Y2H9 1570 aa11.44□□□□□ -0.58
CLINT1-209ENST00000530302 RTEL1-TNFRSF6BF6WH68 1400 aa11.43□□□□□ -0.58
CLINT1-209ENST00000530302 DNMT1P26358 1616 aaKnown RBP11.43□□□□□ -0.58
CLINT1-209ENST00000530302 ABCC5O15440 1437 aa11.42□□□□□ -0.58
CLINT1-209ENST00000530302 C3P01024 1663 aa11.4□□□□□ -0.58
CLINT1-209ENST00000530302 DAPK1P53355 1430 aa11.4□□□□□ -0.58
CLINT1-209ENST00000530302 SHANK2Q9UPX8 1470 aa11.39□□□□□ -0.59
CLINT1-209ENST00000530302 CLTCQ00610 1675 aaKnown RBP11.39□□□□□ -0.59
CLINT1-209ENST00000530302 DHX29Q7Z478 1369 aaKnown RBP11.39□□□□□ -0.59
CLINT1-209ENST00000530302 CEBPAP49715 358 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms