RNA–Protein interactions for RNA: ENST00000530179.1

MS4A6A-212, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 2

Gene MS4A6A, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-212ENST00000530179 SHROOM4Q9ULL8 1493 aa7.44□□□□□ -1.22
MS4A6A-212ENST00000530179 RIMBP2O15034 1052 aa7.44□□□□□ -1.22
MS4A6A-212ENST00000530179 HOXB3P14651 431 aaPredicted RBP7.43□□□□□ -1.22
MS4A6A-212ENST00000530179 HOXB1P14653 301 aaPredicted RBP7.43□□□□□ -1.22
MS4A6A-212ENST00000530179 EFCAB3Q8N7B9 438 aa7.4□□□□□ -1.22
MS4A6A-212ENST00000530179 VARS2Q5ST30 1063 aaKnown RBP7.36□□□□□ -1.23
MS4A6A-212ENST00000530179 MYO15BQ96JP2 1530 aa7.36□□□□□ -1.23
MS4A6A-212ENST00000530179 SOX12O15370 315 aa7.35□□□□□ -1.23
MS4A6A-212ENST00000530179 ZSWIM6Q9HCJ5 1215 aa7.35□□□□□ -1.23
MS4A6A-212ENST00000530179 MICALL2Q8IY33 904 aa7.33□□□□□ -1.24
MS4A6A-212ENST00000530179 RNF166Q96A37 237 aaPredicted RBP7.33□□□□□ -1.24
MS4A6A-212ENST00000530179 RIOK3O14730 519 aaKnown RBP7.31□□□□□ -1.24
MS4A6A-212ENST00000530179 ZNF687Q8N1G0 1237 aa7.31□□□□□ -1.24
MS4A6A-212ENST00000530179 MYT1LQ9UL68 1186 aa7.31□□□□□ -1.24
MS4A6A-212ENST00000530179 VGFO15240 615 aaPredicted RBP7.28□□□□□ -1.24
MS4A6A-212ENST00000530179 GPR153Q6NV75 609 aa7.28□□□□□ -1.24
MS4A6A-212ENST00000530179 TMEM92Q6UXU6 159 aa7.28□□□□□ -1.24
MS4A6A-212ENST00000530179 SMARCA2P51531 1590 aa7.28□□□□□ -1.24
MS4A6A-212ENST00000530179 NESP48681 1621 aa7.27□□□□□ -1.25
MS4A6A-212ENST00000530179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.27□□□□□ -1.25
MS4A6A-212ENST00000530179 ZFP91Q96JP5 570 aaPredicted RBP7.27□□□□□ -1.25
MS4A6A-212ENST00000530179 PHF8Q9UPP1 1060 aa7.27□□□□□ -1.25
MS4A6A-212ENST00000530179 THOC2Q8NI27 1593 aaKnown RBP7.26□□□□□ -1.25
MS4A6A-212ENST00000530179 PTGER2P43116 358 aa7.26□□□□□ -1.25
MS4A6A-212ENST00000530179 ARSIQ5FYB1 569 aa7.26□□□□□ -1.25
MS4A6A-212ENST00000530179 ANKRD13DQ6ZTN6 518 aa7.26□□□□□ -1.25
MS4A6A-212ENST00000530179 TAOK2Q9UL54 1235 aa7.26□□□□□ -1.25
MS4A6A-212ENST00000530179 NLRP6P59044 892 aa7.24□□□□□ -1.25
MS4A6A-212ENST00000530179 MS4A4AQ96JQ5 239 aa7.24□□□□□ -1.25
MS4A6A-212ENST00000530179 ZNF316A6NFI3 1004 aaPredicted RBP7.22□□□□□ -1.25
MS4A6A-212ENST00000530179 RNF25Q96BH1 459 aaPredicted RBP7.21□□□□□ -1.26
MS4A6A-212ENST00000530179 BAZ1AQ9NRL2 1556 aaPredicted RBP7.2□□□□□ -1.26
MS4A6A-212ENST00000530179 KIF21AQ7Z4S6 1674 aa7.2□□□□□ -1.26
MS4A6A-212ENST00000530179 ZCCHC6Q5VYS8 1495 aaKnown RBP7.19□□□□□ -1.26
MS4A6A-212ENST00000530179 KHSRPQ92945 711 aaKnown RBP eCLIP7.18□□□□□ -1.26
MS4A6A-212ENST00000530179 BCL11BQ9C0K0 894 aaPredicted RBP7.18□□□□□ -1.26
MS4A6A-212ENST00000530179 STK24Q9Y6E0 443 aa7.18□□□□□ -1.26
MS4A6A-212ENST00000530179 LSM11P83369 360 aaKnown RBP eCLIP7.17□□□□□ -1.26
MS4A6A-212ENST00000530179 PBX2P40425 430 aa7.15□□□□□ -1.26
MS4A6A-212ENST00000530179 FBXO22Q8NEZ5 403 aa7.15□□□□□ -1.26
MS4A6A-212ENST00000530179 RIMBP3CA6NJZ7 1639 aa7.15□□□□□ -1.27
MS4A6A-212ENST00000530179 RIMBP3BA6NNM3 1639 aa7.15□□□□□ -1.27
MS4A6A-212ENST00000530179 RIMBP3Q9UFD9 1639 aa7.15□□□□□ -1.27
MS4A6A-212ENST00000530179 NUDT7P0C024 238 aa7.14□□□□□ -1.27
MS4A6A-212ENST00000530179 DCAF1Q9Y4B6 1507 aa7.13□□□□□ -1.27
MS4A6A-212ENST00000530179 C2orf72A6NCS6 295 aa7.13□□□□□ -1.27
MS4A6A-212ENST00000530179 STK25O00506 426 aa7.13□□□□□ -1.27
MS4A6A-212ENST00000530179 TMC2Q8TDI7 906 aa7.12□□□□□ -1.27
MS4A6A-212ENST00000530179 MFRPQ9BY79 579 aa7.11□□□□□ -1.27
MS4A6A-212ENST00000530179 LHX6Q9UPM6 363 aa7.11□□□□□ -1.27
MS4A6A-212ENST00000530179 KIF3CO14782 793 aa7.1□□□□□ -1.27
MS4A6A-212ENST00000530179 SLC34A2O95436 690 aa7.1□□□□□ -1.27
MS4A6A-212ENST00000530179 HCSTQ9UBK5 93 aa7.1□□□□□ -1.27
MS4A6A-212ENST00000530179 AXIN2Q9Y2T1 843 aa7.1□□□□□ -1.27
MS4A6A-212ENST00000530179 PCDHGA4Q9Y5G9 962 aa7.1□□□□□ -1.27
MS4A6A-212ENST00000530179 NCAPD3P42695 1498 aa7.09□□□□□ -1.27
MS4A6A-212ENST00000530179 PSDA5PKW4 1024 aaPredicted RBP7.08□□□□□ -1.28
MS4A6A-212ENST00000530179 ECM2O94769 699 aaPredicted RBP7.08□□□□□ -1.28
MS4A6A-212ENST00000530179 PLA2G2EQ9NZK7 142 aa7.08□□□□□ -1.28
MS4A6A-212ENST00000530179 LAMC3Q9Y6N6 1575 aa7.08□□□□□ -1.28
MS4A6A-212ENST00000530179 ARHGAP33O14559 1287 aa7.07□□□□□ -1.28
MS4A6A-212ENST00000530179 ATAD2BQ9ULI0 1458 aa7.06□□□□□ -1.28
MS4A6A-212ENST00000530179 STAC3Q96MF2 364 aa7.06□□□□□ -1.28
MS4A6A-212ENST00000530179 HMGXB3Q12766 1538 aa7.05□□□□□ -1.28
MS4A6A-212ENST00000530179 MRC2Q9UBG0 1479 aa7.04□□□□□ -1.28
MS4A6A-212ENST00000530179 PDS5BQ9NTI5 1447 aa7.04□□□□□ -1.28
MS4A6A-212ENST00000530179 CYB5RLQ6IPT4 315 aa7.04□□□□□ -1.28
MS4A6A-212ENST00000530179 ADGRD1Q6QNK2 874 aa7.04□□□□□ -1.28
MS4A6A-212ENST00000530179 POTEEQ6S8J3 1075 aa7.04□□□□□ -1.28
MS4A6A-212ENST00000530179 ARHGEF11O15085 1522 aa7.04□□□□□ -1.28
MS4A6A-212ENST00000530179 BAZ1BQ9UIG0 1483 aaKnown RBP7.04□□□□□ -1.28
MS4A6A-212ENST00000530179 TBC1D12O60347 775 aa7.02□□□□□ -1.29
MS4A6A-212ENST00000530179 SMARCA4P51532 1647 aa7.01□□□□□ -1.29
MS4A6A-212ENST00000530179 WDR62O43379 1518 aa7.01□□□□□ -1.29
MS4A6A-212ENST00000530179 TK2O00142 265 aa7□□□□□ -1.29
MS4A6A-212ENST00000530179 KCNH8Q96L42 1107 aa7□□□□□ -1.29
MS4A6A-212ENST00000530179 PPP1R37O75864 691 aa6.98□□□□□ -1.29
MS4A6A-212ENST00000530179 PPP4R3BQ5MIZ7 849 aa6.98□□□□□ -1.29
MS4A6A-212ENST00000530179 PTCD2Q8WV60 388 aaKnown RBP6.98□□□□□ -1.29
MS4A6A-212ENST00000530179 RGL2O15211 777 aa6.97□□□□□ -1.29
MS4A6A-212ENST00000530179 PSEN2P49810 448 aa6.97□□□□□ -1.29
MS4A6A-212ENST00000530179 PLPP6Q8IY26 295 aa6.97□□□□□ -1.29
MS4A6A-212ENST00000530179 KCTD12Q96CX2 325 aaKnown RBP6.97□□□□□ -1.29
MS4A6A-212ENST00000530179 DMRTA1Q5VZB9 504 aa6.96□□□□□ -1.3
MS4A6A-212ENST00000530179 HRO43593 1189 aa6.95□□□□□ -1.3
MS4A6A-212ENST00000530179 FOXK1P85037 733 aa6.95□□□□□ -1.3
MS4A6A-212ENST00000530179 ARAP1Q96P48 1450 aa6.94□□□□□ -1.3
MS4A6A-212ENST00000530179 CEP164Q9UPV0 1460 aa6.94□□□□□ -1.3
MS4A6A-212ENST00000530179 KDM4FA0A1W2PPD8 638 aa6.94□□□□□ -1.3
MS4A6A-212ENST00000530179 GPHNQ9NQX3 736 aaPredicted RBP6.94□□□□□ -1.3
MS4A6A-212ENST00000530179 PKD2Q13563 968 aa6.93□□□□□ -1.3
MS4A6A-212ENST00000530179 KCNK17Q96T54 332 aa6.92□□□□□ -1.3
MS4A6A-212ENST00000530179 CHD1O14646 1710 aa6.92□□□□□ -1.3
MS4A6A-212ENST00000530179 PTPN5P54829 565 aa6.91□□□□□ -1.3
MS4A6A-212ENST00000530179 DSG2Q14126 1118 aa6.9□□□□□ -1.3
MS4A6A-212ENST00000530179 GOLGA8CPA6NN73 597 aa6.89□□□□□ -1.31
MS4A6A-212ENST00000530179 CADPSQ9ULU8 1353 aa6.89□□□□□ -1.31
MS4A6A-212ENST00000530179 FANCD2Q9BXW9 1451 aa6.88□□□□□ -1.31
MS4A6A-212ENST00000530179 VPS9D1Q9Y2B5 631 aa6.88□□□□□ -1.31
MS4A6A-212ENST00000530179 ZNF608Q9ULD9 1512 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms