RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 PREX2Q70Z35 1606 aa24.89■■□□□ 1.57
CCDC90B-215ENST00000529745 ZMYM4Q5VZL5 1548 aa24.88■■□□□ 1.57
CCDC90B-215ENST00000529745 CDC42BPAQ5VT25 1732 aa24.85■■□□□ 1.57
CCDC90B-215ENST00000529745 RAPGEF3O95398 923 aa24.84■■□□□ 1.57
CCDC90B-215ENST00000529745 ARHGEF40Q8TER5 1519 aa24.82■■□□□ 1.56
CCDC90B-215ENST00000529745 LOC105371045A0A1W2PR82 267 aa24.81■■□□□ 1.56
CCDC90B-215ENST00000529745 EFCAB2Q5VUJ9 269 aa24.81■■□□□ 1.56
CCDC90B-215ENST00000529745 ARHGAP5Q13017 1502 aa24.81■■□□□ 1.56
CCDC90B-215ENST00000529745 POGZQ7Z3K3 1410 aa24.79■■□□□ 1.56
CCDC90B-215ENST00000529745 PTPRMP28827 1452 aa24.79■■□□□ 1.56
CCDC90B-215ENST00000529745 MAGI2Q86UL8 1455 aa24.79■■□□□ 1.56
CCDC90B-215ENST00000529745 SCAPERQ9BY12 1400 aa24.78■■□□□ 1.56
CCDC90B-215ENST00000529745 ADAMTSL3P82987 1691 aa24.77■■□□□ 1.56
CCDC90B-215ENST00000529745 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
CCDC90B-215ENST00000529745 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
CCDC90B-215ENST00000529745 VPS8Q8N3P4 1428 aa24.75■■□□□ 1.55
CCDC90B-215ENST00000529745 KDM5CP41229 1560 aa24.74■■□□□ 1.55
CCDC90B-215ENST00000529745 ABCC1P33527 1531 aa24.73■■□□□ 1.55
CCDC90B-215ENST00000529745 SOCS7O14512 581 aa24.73■■□□□ 1.55
CCDC90B-215ENST00000529745 ITSN2Q9NZM3 1697 aa24.72■■□□□ 1.55
CCDC90B-215ENST00000529745 ZFYVE16Q7Z3T8 1539 aa24.72■■□□□ 1.55
CCDC90B-215ENST00000529745 ZNF518AQ6AHZ1 1483 aa24.72■■□□□ 1.55
CCDC90B-215ENST00000529745 ILDR2Q71H61 639 aa24.72■■□□□ 1.55
CCDC90B-215ENST00000529745 GPATCH8Q9UKJ3 1502 aaKnown RBP24.71■■□□□ 1.55
CCDC90B-215ENST00000529745 MTUS2Q5JR59 1369 aa24.7■■□□□ 1.55
CCDC90B-215ENST00000529745 TIAM1Q13009 1591 aa24.7■■□□□ 1.54
CCDC90B-215ENST00000529745 BCORL1Q5H9F3 1711 aa24.69■■□□□ 1.54
CCDC90B-215ENST00000529745 SAMD9LQ8IVG5 1584 aa24.67■■□□□ 1.54
CCDC90B-215ENST00000529745 MAP3K1Q13233 1512 aa24.66■■□□□ 1.54
CCDC90B-215ENST00000529745 YEATS2Q9ULM3 1422 aa24.66■■□□□ 1.54
CCDC90B-215ENST00000529745 ARHGEF12Q9NZN5 1544 aa24.65■■□□□ 1.54
CCDC90B-215ENST00000529745 SUPT6HQ7KZ85 1726 aaKnown RBP24.64■■□□□ 1.54
CCDC90B-215ENST00000529745 SIGLEC1Q9BZZ2 1709 aa24.64■■□□□ 1.54
CCDC90B-215ENST00000529745 DISP3Q9P2K9 1392 aa24.62■■□□□ 1.53
CCDC90B-215ENST00000529745 MLH3Q9UHC1 1453 aa24.62■■□□□ 1.53
CCDC90B-215ENST00000529745 REREQ9P2R6 1566 aa24.6■■□□□ 1.53
CCDC90B-215ENST00000529745 CCNB3Q8WWL7 1395 aa24.6■■□□□ 1.53
CCDC90B-215ENST00000529745 ATP10AO60312 1499 aa24.59■■□□□ 1.53
CCDC90B-215ENST00000529745 PLEKHH2Q8IVE3 1493 aa24.59■■□□□ 1.53
CCDC90B-215ENST00000529745 CERKQ8TCT0 537 aa24.59■■□□□ 1.53
CCDC90B-215ENST00000529745 MADDQ8WXG6 1647 aa24.59■■□□□ 1.53
CCDC90B-215ENST00000529745 KIAA1107Q9UPP5 1409 aa24.58■■□□□ 1.53
CCDC90B-215ENST00000529745 TRAPPC8Q9Y2L5 1435 aa24.58■■□□□ 1.53
CCDC90B-215ENST00000529745 DIP2CQ9Y2E4 1556 aa24.58■■□□□ 1.52
CCDC90B-215ENST00000529745 C9orf84Q5VXU9 1444 aa24.57■■□□□ 1.52
CCDC90B-215ENST00000529745 KIDINS220Q9ULH0 1771 aa24.57■■□□□ 1.52
CCDC90B-215ENST00000529745 SYCP2Q9BX26 1530 aa24.56■■□□□ 1.52
CCDC90B-215ENST00000529745 LRRC9Q6ZRR7 1453 aa24.56■■□□□ 1.52
CCDC90B-215ENST00000529745 ABCA6Q8N139 1617 aa24.55■■□□□ 1.52
CCDC90B-215ENST00000529745 AFAP1Q8N556 730 aa24.55■■□□□ 1.52
CCDC90B-215ENST00000529745 NCOA2Q15596 1464 aa24.55■■□□□ 1.52
CCDC90B-215ENST00000529745 CFDP1Q9UEE9 299 aaPredicted RBP24.53■■□□□ 1.52
CCDC90B-215ENST00000529745 HSPA2P54652 639 aa24.5■■□□□ 1.51
CCDC90B-215ENST00000529745 ARID4BQ4LE39 1312 aaPredicted RBP24.49■■□□□ 1.51
CCDC90B-215ENST00000529745 INO80Q9ULG1 1556 aaPredicted RBP24.49■■□□□ 1.51
CCDC90B-215ENST00000529745 RIMS1Q86UR5 1692 aaKnown RBP24.48■■□□□ 1.51
CCDC90B-215ENST00000529745 FER1L4A9Z1Z3 1794 aa24.47■■□□□ 1.51
CCDC90B-215ENST00000529745 AGLP35573 1532 aa24.47■■□□□ 1.51
CCDC90B-215ENST00000529745 ZNF777Q9ULD5 760 aaPredicted RBP24.46■■□□□ 1.51
CCDC90B-215ENST00000529745 MBD5Q9P267 1494 aa24.45■■□□□ 1.51
CCDC90B-215ENST00000529745 ATP7AQ04656 1500 aa24.44■■□□□ 1.5
CCDC90B-215ENST00000529745 HNRNPMP52272 730 aaKnown RBP eCLIP24.42■■□□□ 1.5
CCDC90B-215ENST00000529745 CAMSAP2Q08AD1 1489 aa24.4■■□□□ 1.5
CCDC90B-215ENST00000529745 ARHGEF5Q12774 1597 aa24.39■■□□□ 1.5
CCDC90B-215ENST00000529745 SPATA31D1Q6ZQQ2 1576 aa24.39■■□□□ 1.5
CCDC90B-215ENST00000529745 ADGBQ8N7X0 1667 aa24.39■■□□□ 1.49
CCDC90B-215ENST00000529745 SPAG9O60271 1321 aaKnown RBP24.38■■□□□ 1.49
CCDC90B-215ENST00000529745 PLXNC1O60486 1568 aa24.38■■□□□ 1.49
CCDC90B-215ENST00000529745 KANK4Q5T7N3 995 aaPredicted RBP24.38■■□□□ 1.49
CCDC90B-215ENST00000529745 ZNF644Q9H582 1327 aaPredicted RBP24.37■■□□□ 1.49
CCDC90B-215ENST00000529745 RTEL1-TNFRSF6BF6WH68 1400 aa24.37■■□□□ 1.49
CCDC90B-215ENST00000529745 PHF23Q9BUL5 403 aaPredicted RBP24.37■■□□□ 1.49
CCDC90B-215ENST00000529745 MIA2Q96PC5 1412 aa24.35■■□□□ 1.49
CCDC90B-215ENST00000529745 CCDC141Q6ZP82 1450 aa24.35■■□□□ 1.49
CCDC90B-215ENST00000529745 MYT1LQ9UL68 1186 aa24.35■■□□□ 1.49
CCDC90B-215ENST00000529745 MYOM3Q5VTT5 1437 aa24.34■■□□□ 1.49
CCDC90B-215ENST00000529745 RSPH4AQ5TD94 716 aa24.33■■□□□ 1.49
CCDC90B-215ENST00000529745 APLP2Q06481 763 aa24.3■■□□□ 1.48
CCDC90B-215ENST00000529745 A2MP01023 1474 aa24.3■■□□□ 1.48
CCDC90B-215ENST00000529745 PLPPR3Q6T4P5 718 aa24.29■■□□□ 1.48
CCDC90B-215ENST00000529745 MAST1Q9Y2H9 1570 aa24.29■■□□□ 1.48
CCDC90B-215ENST00000529745 MLECQ14165 292 aa24.28■■□□□ 1.48
CCDC90B-215ENST00000529745 MROH2AA6NES4 1674 aa24.27■■□□□ 1.48
CCDC90B-215ENST00000529745 C3P01024 1663 aa24.24■■□□□ 1.47
CCDC90B-215ENST00000529745 PTPN23Q9H3S7 1636 aa24.22■■□□□ 1.47
CCDC90B-215ENST00000529745 CNTLNQ9NXG0 1405 aa24.22■■□□□ 1.47
CCDC90B-215ENST00000529745 SETD1BQ9UPS6 1966 aaKnown RBP24.21■■□□□ 1.47
CCDC90B-215ENST00000529745 CROCC2H7BZ55 1655 aa24.21■■□□□ 1.47
CCDC90B-215ENST00000529745 PREX1Q8TCU6 1659 aa24.21■■□□□ 1.47
CCDC90B-215ENST00000529745 DHX29Q7Z478 1369 aaKnown RBP24.19■■□□□ 1.46
CCDC90B-215ENST00000529745 TCOF1Q13428 1488 aaKnown RBP24.19■■□□□ 1.46
CCDC90B-215ENST00000529745 STRCQ7RTU9 1775 aa24.19■■□□□ 1.46
CCDC90B-215ENST00000529745 FGD6Q6ZV73 1430 aa24.17■■□□□ 1.46
CCDC90B-215ENST00000529745 FAM135AQ9P2D6 1515 aa24.15■■□□□ 1.46
CCDC90B-215ENST00000529745 CLTCQ00610 1675 aaKnown RBP24.15■■□□□ 1.46
CCDC90B-215ENST00000529745 SHANK2Q9UPX8 1470 aa24.14■■□□□ 1.46
CCDC90B-215ENST00000529745 DNMT1P26358 1616 aaKnown RBP24.14■■□□□ 1.46
CCDC90B-215ENST00000529745 TSPY4P0CV99 314 aa24.14■■□□□ 1.45
CCDC90B-215ENST00000529745 TSPY10P0CW01 314 aa24.14■■□□□ 1.45
CCDC90B-215ENST00000529745 PPP6R1Q9UPN7 881 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms