RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 DENND4BO75064 1496 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-212ENST00000529312 PLCH2O75038 1416 aa12.59□□□□□ -0.39
CCDC90B-212ENST00000529312 CLIP1P30622 1438 aa12.58□□□□□ -0.4
CCDC90B-212ENST00000529312 FANCAO15360 1455 aa12.58□□□□□ -0.4
CCDC90B-212ENST00000529312 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
CCDC90B-212ENST00000529312 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCDC90B-212ENST00000529312 HECW1Q76N89 1606 aa12.55□□□□□ -0.4
CCDC90B-212ENST00000529312 TROQ12816 1431 aaPredicted RBP12.54□□□□□ -0.4
CCDC90B-212ENST00000529312 SCAPERQ9BY12 1400 aa12.54□□□□□ -0.4
CCDC90B-212ENST00000529312 CDK13Q14004 1512 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-212ENST00000529312 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
CCDC90B-212ENST00000529312 POGZQ7Z3K3 1410 aa12.53□□□□□ -0.4
CCDC90B-212ENST00000529312 MAGI2Q86UL8 1455 aa12.53□□□□□ -0.4
CCDC90B-212ENST00000529312 CFAP74Q9C0B2 1584 aa12.52□□□□□ -0.41
CCDC90B-212ENST00000529312 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-212ENST00000529312 CCDC18Q5T9S5 1454 aa12.5□□□□□ -0.41
CCDC90B-212ENST00000529312 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
CCDC90B-212ENST00000529312 MLECQ14165 292 aa12.46□□□□□ -0.41
CCDC90B-212ENST00000529312 ZNF777Q9ULD5 760 aaPredicted RBP12.46□□□□□ -0.41
CCDC90B-212ENST00000529312 TTC37Q6PGP7 1564 aa12.45□□□□□ -0.42
CCDC90B-212ENST00000529312 CFDP1Q9UEE9 299 aaPredicted RBP12.45□□□□□ -0.42
CCDC90B-212ENST00000529312 ATP10AO60312 1499 aa12.45□□□□□ -0.42
CCDC90B-212ENST00000529312 KIF14Q15058 1648 aa12.44□□□□□ -0.42
CCDC90B-212ENST00000529312 ARHGAP5Q13017 1502 aa12.44□□□□□ -0.42
CCDC90B-212ENST00000529312 DSG3P32926 999 aa12.44□□□□□ -0.42
CCDC90B-212ENST00000529312 ESF1Q9H501 851 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-212ENST00000529312 PTPRMP28827 1452 aa12.44□□□□□ -0.42
CCDC90B-212ENST00000529312 FYCO1Q9BQS8 1478 aa12.44□□□□□ -0.42
CCDC90B-212ENST00000529312 MTUS2Q5JR59 1369 aa12.43□□□□□ -0.42
CCDC90B-212ENST00000529312 ZFYVE16Q7Z3T8 1539 aa12.42□□□□□ -0.42
CCDC90B-212ENST00000529312 ZNF518AQ6AHZ1 1483 aa12.42□□□□□ -0.42
CCDC90B-212ENST00000529312 YEATS2Q9ULM3 1422 aa12.42□□□□□ -0.42
CCDC90B-212ENST00000529312 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
CCDC90B-212ENST00000529312 FRMPD1Q5SYB0 1578 aa12.41□□□□□ -0.42
CCDC90B-212ENST00000529312 RICTORQ6R327 1708 aa12.41□□□□□ -0.42
CCDC90B-212ENST00000529312 MYO5CQ9NQX4 1742 aa12.41□□□□□ -0.42
CCDC90B-212ENST00000529312 CCNB3Q8WWL7 1395 aa12.41□□□□□ -0.42
CCDC90B-212ENST00000529312 LOC105371045A0A1W2PR82 267 aa12.4□□□□□ -0.42
CCDC90B-212ENST00000529312 HNRNPMP52272 730 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCDC90B-212ENST00000529312 RSPH4AQ5TD94 716 aa12.4□□□□□ -0.42
CCDC90B-212ENST00000529312 ADAMTSL3P82987 1691 aa12.4□□□□□ -0.42
CCDC90B-212ENST00000529312 C9orf84Q5VXU9 1444 aa12.39□□□□□ -0.43
CCDC90B-212ENST00000529312 SPAG9O60271 1321 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-212ENST00000529312 ARHGEF40Q8TER5 1519 aa12.38□□□□□ -0.43
CCDC90B-212ENST00000529312 BCORL1Q5H9F3 1711 aa12.38□□□□□ -0.43
CCDC90B-212ENST00000529312 MLH3Q9UHC1 1453 aa12.38□□□□□ -0.43
CCDC90B-212ENST00000529312 CEP162Q5TB80 1403 aa12.37□□□□□ -0.43
CCDC90B-212ENST00000529312 PCF11O94913 1555 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-212ENST00000529312 HECW2Q9P2P5 1572 aa12.36□□□□□ -0.43
CCDC90B-212ENST00000529312 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
CCDC90B-212ENST00000529312 GPATCH8Q9UKJ3 1502 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-212ENST00000529312 KIAA1107Q9UPP5 1409 aa12.36□□□□□ -0.43
CCDC90B-212ENST00000529312 APLP2Q06481 763 aa12.35□□□□□ -0.43
CCDC90B-212ENST00000529312 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-212ENST00000529312 TRAPPC8Q9Y2L5 1435 aa12.35□□□□□ -0.43
CCDC90B-212ENST00000529312 LRRIQ1Q96JM4 1722 aa12.32□□□□□ -0.44
CCDC90B-212ENST00000529312 CDC42BPBQ9Y5S2 1711 aa12.32□□□□□ -0.44
CCDC90B-212ENST00000529312 CAPN15O75808 1086 aa12.32□□□□□ -0.44
CCDC90B-212ENST00000529312 TSPY4P0CV99 314 aa12.32□□□□□ -0.44
CCDC90B-212ENST00000529312 TSPY10P0CW01 314 aa12.32□□□□□ -0.44
CCDC90B-212ENST00000529312 CEBPAP49715 358 aaPredicted RBP12.32□□□□□ -0.44
CCDC90B-212ENST00000529312 ILDR1Q86SU0 546 aaPredicted RBP12.32□□□□□ -0.44
CCDC90B-212ENST00000529312 MADDQ8WXG6 1647 aa12.32□□□□□ -0.44
CCDC90B-212ENST00000529312 KDM5CP41229 1560 aa12.31□□□□□ -0.44
CCDC90B-212ENST00000529312 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
CCDC90B-212ENST00000529312 ARHGEF12Q9NZN5 1544 aa12.31□□□□□ -0.44
CCDC90B-212ENST00000529312 SETD1BQ9UPS6 1966 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-212ENST00000529312 PREX2Q70Z35 1606 aa12.29□□□□□ -0.44
CCDC90B-212ENST00000529312 HSPA2P54652 639 aa12.29□□□□□ -0.44
CCDC90B-212ENST00000529312 ABCC1P33527 1531 aa12.28□□□□□ -0.44
CCDC90B-212ENST00000529312 AGLP35573 1532 aa12.28□□□□□ -0.44
CCDC90B-212ENST00000529312 NPM3O75607 178 aaKnown RBP12.28□□□□□ -0.44
CCDC90B-212ENST00000529312 GGT6Q6P531 493 aa12.28□□□□□ -0.44
CCDC90B-212ENST00000529312 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
CCDC90B-212ENST00000529312 RIMS1Q86UR5 1692 aaKnown RBP12.28□□□□□ -0.44
CCDC90B-212ENST00000529312 CNTLNQ9NXG0 1405 aa12.28□□□□□ -0.44
CCDC90B-212ENST00000529312 REREQ9P2R6 1566 aa12.26□□□□□ -0.45
CCDC90B-212ENST00000529312 CDC42BPAQ5VT25 1732 aa12.26□□□□□ -0.45
CCDC90B-212ENST00000529312 VPS8Q8N3P4 1428 aa12.26□□□□□ -0.45
CCDC90B-212ENST00000529312 FBXO41Q8TF61 875 aa12.25□□□□□ -0.45
CCDC90B-212ENST00000529312 RTEL1-TNFRSF6BF6WH68 1400 aa12.25□□□□□ -0.45
CCDC90B-212ENST00000529312 LMTK3Q96Q04 1460 aa12.25□□□□□ -0.45
CCDC90B-212ENST00000529312 EHBP1L1Q8N3D4 1523 aa12.25□□□□□ -0.45
CCDC90B-212ENST00000529312 ZMYM3Q14202 1370 aa12.24□□□□□ -0.45
CCDC90B-212ENST00000529312 SAMD9LQ8IVG5 1584 aa12.24□□□□□ -0.45
CCDC90B-212ENST00000529312 DIP2CQ9Y2E4 1556 aa12.24□□□□□ -0.45
CCDC90B-212ENST00000529312 ITSN2Q9NZM3 1697 aa12.23□□□□□ -0.45
CCDC90B-212ENST00000529312 DHX29Q7Z478 1369 aaKnown RBP12.23□□□□□ -0.45
CCDC90B-212ENST00000529312 SYCP2Q9BX26 1530 aa12.22□□□□□ -0.45
CCDC90B-212ENST00000529312 A2MP01023 1474 aa12.22□□□□□ -0.45
CCDC90B-212ENST00000529312 NCOA2Q15596 1464 aa12.22□□□□□ -0.45
CCDC90B-212ENST00000529312 UHRF1BP1Q6BDS2 1440 aa12.22□□□□□ -0.45
CCDC90B-212ENST00000529312 KIF3BO15066 747 aa12.22□□□□□ -0.45
CCDC90B-212ENST00000529312 FER1L4A9Z1Z3 1794 aa12.22□□□□□ -0.45
CCDC90B-212ENST00000529312 MBD5Q9P267 1494 aa12.21□□□□□ -0.45
CCDC90B-212ENST00000529312 KIDINS220Q9ULH0 1771 aa12.21□□□□□ -0.45
CCDC90B-212ENST00000529312 KANK4Q5T7N3 995 aaPredicted RBP12.21□□□□□ -0.45
CCDC90B-212ENST00000529312 MAP3K1Q13233 1512 aa12.2□□□□□ -0.46
CCDC90B-212ENST00000529312 LRRC9Q6ZRR7 1453 aa12.2□□□□□ -0.46
CCDC90B-212ENST00000529312 SIGLEC1Q9BZZ2 1709 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms