RNA–Protein interactions for RNA: ENST00000529199.1

CTSF-206, Transcript of cathepsin F, humanhuman

TSL 4

Gene CTSF, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-206ENST00000529199 HECW1Q76N89 1606 aa32.75■■■□□ 2.83
CTSF-206ENST00000529199 ZMYM4Q5VZL5 1548 aa32.74■■■□□ 2.83
CTSF-206ENST00000529199 MAGI2Q86UL8 1455 aa32.73■■■□□ 2.83
CTSF-206ENST00000529199 RIMS1Q86UR5 1692 aaKnown RBP32.72■■■□□ 2.83
CTSF-206ENST00000529199 PCF11O94913 1555 aaKnown RBP32.7■■■□□ 2.82
CTSF-206ENST00000529199 LMTK3Q96Q04 1460 aa32.67■■■□□ 2.82
CTSF-206ENST00000529199 HSPA2P54652 639 aa32.66■■■□□ 2.82
CTSF-206ENST00000529199 FBXO41Q8TF61 875 aa32.65■■■□□ 2.82
CTSF-206ENST00000529199 MYT1LQ9UL68 1186 aa32.65■■■□□ 2.82
CTSF-206ENST00000529199 TROQ12816 1431 aaPredicted RBP32.64■■■□□ 2.82
CTSF-206ENST00000529199 CLIP1P30622 1438 aa32.62■■■□□ 2.81
CTSF-206ENST00000529199 SIGLEC1Q9BZZ2 1709 aa32.62■■■□□ 2.81
CTSF-206ENST00000529199 KIF14Q15058 1648 aa32.62■■■□□ 2.81
CTSF-206ENST00000529199 ATP10AO60312 1499 aa32.61■■■□□ 2.81
CTSF-206ENST00000529199 AFAP1Q8N556 730 aa32.61■■■□□ 2.81
CTSF-206ENST00000529199 MYO5CQ9NQX4 1742 aa32.6■■■□□ 2.81
CTSF-206ENST00000529199 ARHGAP5Q13017 1502 aa32.59■■■□□ 2.81
CTSF-206ENST00000529199 C9orf84Q5VXU9 1444 aa32.55■■■□□ 2.8
CTSF-206ENST00000529199 ZNF518AQ6AHZ1 1483 aa32.52■■■□□ 2.8
CTSF-206ENST00000529199 CEBPAP49715 358 aaPredicted RBP32.5■■■□□ 2.79
CTSF-206ENST00000529199 FER1L4A9Z1Z3 1794 aa32.47■■■□□ 2.79
CTSF-206ENST00000529199 CASKIN1Q8WXD9 1431 aa32.47■■■□□ 2.79
CTSF-206ENST00000529199 LRRIQ1Q96JM4 1722 aa32.46■■■□□ 2.79
CTSF-206ENST00000529199 ARHGEF12Q9NZN5 1544 aa32.45■■■□□ 2.78
CTSF-206ENST00000529199 CCDC18Q5T9S5 1454 aa32.42■■■□□ 2.78
CTSF-206ENST00000529199 KDM5CP41229 1560 aa32.4■■■□□ 2.78
CTSF-206ENST00000529199 TRAPPC8Q9Y2L5 1435 aa32.37■■■□□ 2.77
CTSF-206ENST00000529199 ZNF777Q9ULD5 760 aaPredicted RBP32.37■■■□□ 2.77
CTSF-206ENST00000529199 CDC42BPBQ9Y5S2 1711 aa32.37■■■□□ 2.77
CTSF-206ENST00000529199 ESF1Q9H501 851 aaKnown RBP32.35■■■□□ 2.77
CTSF-206ENST00000529199 MLH3Q9UHC1 1453 aa32.34■■■□□ 2.77
CTSF-206ENST00000529199 DIP2CQ9Y2E4 1556 aa32.32■■■□□ 2.77
CTSF-206ENST00000529199 PREX2Q70Z35 1606 aa32.3■■■□□ 2.76
CTSF-206ENST00000529199 CERKQ8TCT0 537 aa32.29■■■□□ 2.76
CTSF-206ENST00000529199 ABCC1P33527 1531 aa32.29■■■□□ 2.76
CTSF-206ENST00000529199 FYCO1Q9BQS8 1478 aa32.29■■■□□ 2.76
CTSF-206ENST00000529199 ABCA6Q8N139 1617 aa32.26■■■□□ 2.76
CTSF-206ENST00000529199 HNRNPMP52272 730 aaKnown RBP eCLIP32.23■■■□□ 2.75
CTSF-206ENST00000529199 PREX1Q8TCU6 1659 aa32.23■■■□□ 2.75
CTSF-206ENST00000529199 UHRF1BP1Q6BDS2 1440 aa32.23■■■□□ 2.75
CTSF-206ENST00000529199 REREQ9P2R6 1566 aa32.23■■■□□ 2.75
CTSF-206ENST00000529199 ITSN2Q9NZM3 1697 aa32.21■■■□□ 2.75
CTSF-206ENST00000529199 DMRT2Q9Y5R5 561 aa32.21■■■□□ 2.75
CTSF-206ENST00000529199 CDC42BPAQ5VT25 1732 aa32.19■■■□□ 2.74
CTSF-206ENST00000529199 AGLP35573 1532 aa32.19■■■□□ 2.74
CTSF-206ENST00000529199 SPAG9O60271 1321 aaKnown RBP32.19■■■□□ 2.74
CTSF-206ENST00000529199 CFDP1Q9UEE9 299 aaPredicted RBP32.18■■■□□ 2.74
CTSF-206ENST00000529199 GPATCH8Q9UKJ3 1502 aaKnown RBP32.17■■■□□ 2.74
CTSF-206ENST00000529199 KIDINS220Q9ULH0 1771 aa32.14■■■□□ 2.74
CTSF-206ENST00000529199 CCNB3Q8WWL7 1395 aa32.13■■■□□ 2.73
CTSF-206ENST00000529199 SETD1BQ9UPS6 1966 aaKnown RBP32.13■■■□□ 2.73
CTSF-206ENST00000529199 SAMD9LQ8IVG5 1584 aa32.12■■■□□ 2.73
CTSF-206ENST00000529199 SYCP2Q9BX26 1530 aa32.11■■■□□ 2.73
CTSF-206ENST00000529199 MTUS2Q5JR59 1369 aa32.1■■■□□ 2.73
CTSF-206ENST00000529199 C3P01024 1663 aa32.09■■■□□ 2.73
CTSF-206ENST00000529199 CNTLNQ9NXG0 1405 aa32.08■■■□□ 2.73
CTSF-206ENST00000529199 STRCQ7RTU9 1775 aa32.05■■■□□ 2.72
CTSF-206ENST00000529199 KIAA1107Q9UPP5 1409 aa32.04■■■□□ 2.72
CTSF-206ENST00000529199 PLEKHH2Q8IVE3 1493 aa32.03■■■□□ 2.72
CTSF-206ENST00000529199 ZMYM3Q14202 1370 aa32.01■■■□□ 2.71
CTSF-206ENST00000529199 ZNF644Q9H582 1327 aaPredicted RBP32■■■□□ 2.71
CTSF-206ENST00000529199 GGT6Q6P531 493 aa32■■■□□ 2.71
CTSF-206ENST00000529199 ATP7AQ04656 1500 aa31.98■■■□□ 2.71
CTSF-206ENST00000529199 SUPT6HQ7KZ85 1726 aaKnown RBP31.97■■■□□ 2.71
CTSF-206ENST00000529199 PTPRTO14522 1441 aa31.96■■■□□ 2.71
CTSF-206ENST00000529199 A2MP01023 1474 aa31.96■■■□□ 2.71
CTSF-206ENST00000529199 NPATQ14207 1427 aa31.92■■■□□ 2.7
CTSF-206ENST00000529199 NCOA1Q15788 1441 aa31.89■■■□□ 2.7
CTSF-206ENST00000529199 INO80Q9ULG1 1556 aaPredicted RBP31.89■■■□□ 2.7
CTSF-206ENST00000529199 CEP162Q5TB80 1403 aa31.87■■■□□ 2.69
CTSF-206ENST00000529199 NCKAP5LQ9HCH0 1330 aa31.86■■■□□ 2.69
CTSF-206ENST00000529199 EHBP1L1Q8N3D4 1523 aa31.85■■■□□ 2.69
CTSF-206ENST00000529199 MROH2AA6NES4 1674 aa31.85■■■□□ 2.69
CTSF-206ENST00000529199 TIAM1Q13009 1591 aa31.85■■■□□ 2.69
CTSF-206ENST00000529199 PLXNC1O60486 1568 aa31.84■■■□□ 2.69
CTSF-206ENST00000529199 MBD5Q9P267 1494 aa31.83■■■□□ 2.69
CTSF-206ENST00000529199 CLTCQ00610 1675 aaKnown RBP31.83■■■□□ 2.69
CTSF-206ENST00000529199 CAMSAP1Q5T5Y3 1602 aa31.82■■■□□ 2.69
CTSF-206ENST00000529199 PPP6R1Q9UPN7 881 aa31.82■■■□□ 2.68
CTSF-206ENST00000529199 PTPRKQ15262 1439 aa31.79■■■□□ 2.68
CTSF-206ENST00000529199 RTEL1-TNFRSF6BF6WH68 1400 aa31.76■■■□□ 2.68
CTSF-206ENST00000529199 DHX29Q7Z478 1369 aaKnown RBP31.76■■■□□ 2.67
CTSF-206ENST00000529199 KIF3BO15066 747 aa31.75■■■□□ 2.67
CTSF-206ENST00000529199 ADGBQ8N7X0 1667 aa31.74■■■□□ 2.67
CTSF-206ENST00000529199 LTBP4Q8N2S1 1624 aa31.74■■■□□ 2.67
CTSF-206ENST00000529199 PKD2Q13563 968 aa31.73■■■□□ 2.67
CTSF-206ENST00000529199 NCOA2Q15596 1464 aa31.72■■■□□ 2.67
CTSF-206ENST00000529199 RSPH4AQ5TD94 716 aa31.71■■■□□ 2.67
CTSF-206ENST00000529199 ZNF335Q9H4Z2 1342 aaPredicted RBP31.7■■■□□ 2.66
CTSF-206ENST00000529199 DISP3Q9P2K9 1392 aa31.68■■■□□ 2.66
CTSF-206ENST00000529199 MYO3AQ8NEV4 1616 aa31.68■■■□□ 2.66
CTSF-206ENST00000529199 CCDC141Q6ZP82 1450 aa31.68■■■□□ 2.66
CTSF-206ENST00000529199 LOC105371045A0A1W2PR82 267 aa31.67■■■□□ 2.66
CTSF-206ENST00000529199 FBXO31Q5XUX0 539 aaPredicted RBP31.67■■■□□ 2.66
CTSF-206ENST00000529199 CEP170BQ9Y4F5 1589 aaPredicted RBP31.67■■■□□ 2.66
CTSF-206ENST00000529199 CAMSAP2Q08AD1 1489 aa31.66■■■□□ 2.66
CTSF-206ENST00000529199 TSPY4P0CV99 314 aa31.66■■■□□ 2.66
CTSF-206ENST00000529199 TSPY10P0CW01 314 aa31.66■■■□□ 2.66
CTSF-206ENST00000529199 WASHC2CQ9Y4E1 1318 aa31.65■■■□□ 2.66
CTSF-206ENST00000529199 PLA2R1Q13018 1463 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms