RNA–Protein interactions for RNA: ENST00000528932.1

TRIM3-207, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-207ENST00000528932 ARHGAP35Q9NRY4 1499 aa20.79■□□□□ 0.92
TRIM3-207ENST00000528932 PLCH2O75038 1416 aa20.78■□□□□ 0.92
TRIM3-207ENST00000528932 KIF14Q15058 1648 aa20.77■□□□□ 0.92
TRIM3-207ENST00000528932 FMN1Q68DA7 1419 aa20.77■□□□□ 0.91
TRIM3-207ENST00000528932 POGZQ7Z3K3 1410 aa20.77■□□□□ 0.91
TRIM3-207ENST00000528932 FER1L4A9Z1Z3 1794 aa20.77■□□□□ 0.91
TRIM3-207ENST00000528932 HSPA2P54652 639 aa20.75■□□□□ 0.91
TRIM3-207ENST00000528932 LRRIQ1Q96JM4 1722 aa20.75■□□□□ 0.91
TRIM3-207ENST00000528932 FBXO41Q8TF61 875 aa20.74■□□□□ 0.91
TRIM3-207ENST00000528932 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
TRIM3-207ENST00000528932 MAGI2Q86UL8 1455 aa20.73■□□□□ 0.91
TRIM3-207ENST00000528932 EFCAB2Q5VUJ9 269 aa20.71■□□□□ 0.91
TRIM3-207ENST00000528932 CDK11AQ9UQ88 783 aaPredicted RBP20.7■□□□□ 0.9
TRIM3-207ENST00000528932 ARHGAP5Q13017 1502 aa20.68■□□□□ 0.9
TRIM3-207ENST00000528932 TROQ12816 1431 aaPredicted RBP20.68■□□□□ 0.9
TRIM3-207ENST00000528932 ATP10AO60312 1499 aa20.68■□□□□ 0.9
TRIM3-207ENST00000528932 MYT1LQ9UL68 1186 aa20.66■□□□□ 0.9
TRIM3-207ENST00000528932 C9orf84Q5VXU9 1444 aa20.66■□□□□ 0.9
TRIM3-207ENST00000528932 CLIP1P30622 1438 aa20.65■□□□□ 0.9
TRIM3-207ENST00000528932 AFAP1Q8N556 730 aa20.64■□□□□ 0.89
TRIM3-207ENST00000528932 CDC42BPBQ9Y5S2 1711 aa20.64■□□□□ 0.89
TRIM3-207ENST00000528932 ARHGEF12Q9NZN5 1544 aa20.63■□□□□ 0.89
TRIM3-207ENST00000528932 CEBPAP49715 358 aaPredicted RBP20.62■□□□□ 0.89
TRIM3-207ENST00000528932 ZNF518AQ6AHZ1 1483 aa20.62■□□□□ 0.89
TRIM3-207ENST00000528932 KDM5CP41229 1560 aa20.59■□□□□ 0.89
TRIM3-207ENST00000528932 DIP2CQ9Y2E4 1556 aa20.58■□□□□ 0.88
TRIM3-207ENST00000528932 PREX1Q8TCU6 1659 aa20.58■□□□□ 0.88
TRIM3-207ENST00000528932 PREX2Q70Z35 1606 aa20.57■□□□□ 0.88
TRIM3-207ENST00000528932 ABCA6Q8N139 1617 aa20.56■□□□□ 0.88
TRIM3-207ENST00000528932 ITSN2Q9NZM3 1697 aa20.54■□□□□ 0.88
TRIM3-207ENST00000528932 CASKIN1Q8WXD9 1431 aa20.54■□□□□ 0.88
TRIM3-207ENST00000528932 TRAPPC8Q9Y2L5 1435 aa20.53■□□□□ 0.88
TRIM3-207ENST00000528932 ABCC1P33527 1531 aa20.53■□□□□ 0.88
TRIM3-207ENST00000528932 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
TRIM3-207ENST00000528932 CCDC18Q5T9S5 1454 aa20.53■□□□□ 0.88
TRIM3-207ENST00000528932 C3P01024 1663 aa20.49■□□□□ 0.87
TRIM3-207ENST00000528932 CERKQ8TCT0 537 aa20.49■□□□□ 0.87
TRIM3-207ENST00000528932 MLH3Q9UHC1 1453 aa20.49■□□□□ 0.87
TRIM3-207ENST00000528932 ZNF777Q9ULD5 760 aaPredicted RBP20.48■□□□□ 0.87
TRIM3-207ENST00000528932 STRCQ7RTU9 1775 aa20.48■□□□□ 0.87
TRIM3-207ENST00000528932 KIDINS220Q9ULH0 1771 aa20.48■□□□□ 0.87
TRIM3-207ENST00000528932 REREQ9P2R6 1566 aa20.47■□□□□ 0.87
TRIM3-207ENST00000528932 UHRF1BP1Q6BDS2 1440 aa20.46■□□□□ 0.87
TRIM3-207ENST00000528932 SETD1BQ9UPS6 1966 aaKnown RBP20.46■□□□□ 0.87
TRIM3-207ENST00000528932 FYCO1Q9BQS8 1478 aa20.45■□□□□ 0.86
TRIM3-207ENST00000528932 ESF1Q9H501 851 aaKnown RBP20.44■□□□□ 0.86
TRIM3-207ENST00000528932 SAMD9LQ8IVG5 1584 aa20.43■□□□□ 0.86
TRIM3-207ENST00000528932 AGLP35573 1532 aa20.42■□□□□ 0.86
TRIM3-207ENST00000528932 SYCP2Q9BX26 1530 aa20.42■□□□□ 0.86
TRIM3-207ENST00000528932 SUPT6HQ7KZ85 1726 aaKnown RBP20.4■□□□□ 0.86
TRIM3-207ENST00000528932 HNRNPMP52272 730 aaKnown RBP eCLIP20.39■□□□□ 0.85
TRIM3-207ENST00000528932 GPATCH8Q9UKJ3 1502 aaKnown RBP20.38■□□□□ 0.85
TRIM3-207ENST00000528932 SPAG9O60271 1321 aaKnown RBP20.35■□□□□ 0.85
TRIM3-207ENST00000528932 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
TRIM3-207ENST00000528932 CFDP1Q9UEE9 299 aaPredicted RBP20.33■□□□□ 0.85
TRIM3-207ENST00000528932 CNTLNQ9NXG0 1405 aa20.32■□□□□ 0.84
TRIM3-207ENST00000528932 CCNB3Q8WWL7 1395 aa20.32■□□□□ 0.84
TRIM3-207ENST00000528932 ATP7AQ04656 1500 aa20.32■□□□□ 0.84
TRIM3-207ENST00000528932 CLTCQ00610 1675 aaKnown RBP20.31■□□□□ 0.84
TRIM3-207ENST00000528932 MROH2AA6NES4 1674 aa20.3■□□□□ 0.84
TRIM3-207ENST00000528932 MTUS2Q5JR59 1369 aa20.3■□□□□ 0.84
TRIM3-207ENST00000528932 INO80Q9ULG1 1556 aaPredicted RBP20.29■□□□□ 0.84
TRIM3-207ENST00000528932 PTPRTO14522 1441 aa20.27■□□□□ 0.84
TRIM3-207ENST00000528932 ZMYM3Q14202 1370 aa20.27■□□□□ 0.84
TRIM3-207ENST00000528932 A2MP01023 1474 aa20.26■□□□□ 0.83
TRIM3-207ENST00000528932 PLEKHH2Q8IVE3 1493 aa20.26■□□□□ 0.83
TRIM3-207ENST00000528932 CAMSAP1Q5T5Y3 1602 aa20.26■□□□□ 0.83
TRIM3-207ENST00000528932 NCOA1Q15788 1441 aa20.26■□□□□ 0.83
TRIM3-207ENST00000528932 KIAA1107Q9UPP5 1409 aa20.26■□□□□ 0.83
TRIM3-207ENST00000528932 ZNF644Q9H582 1327 aaPredicted RBP20.26■□□□□ 0.83
TRIM3-207ENST00000528932 PLXNC1O60486 1568 aa20.25■□□□□ 0.83
TRIM3-207ENST00000528932 GGT6Q6P531 493 aa20.25■□□□□ 0.83
TRIM3-207ENST00000528932 TIAM1Q13009 1591 aa20.25■□□□□ 0.83
TRIM3-207ENST00000528932 NPATQ14207 1427 aa20.23■□□□□ 0.83
TRIM3-207ENST00000528932 ADGBQ8N7X0 1667 aa20.22■□□□□ 0.83
TRIM3-207ENST00000528932 MYO3AQ8NEV4 1616 aa20.22■□□□□ 0.83
TRIM3-207ENST00000528932 NCKAP5LQ9HCH0 1330 aa20.22■□□□□ 0.83
TRIM3-207ENST00000528932 LTBP4Q8N2S1 1624 aa20.21■□□□□ 0.83
TRIM3-207ENST00000528932 EHBP1L1Q8N3D4 1523 aa20.21■□□□□ 0.83
TRIM3-207ENST00000528932 ZNF142P52746 1687 aaPredicted RBP20.17■□□□□ 0.82
TRIM3-207ENST00000528932 DISP3Q9P2K9 1392 aa20.17■□□□□ 0.82
TRIM3-207ENST00000528932 PTPRKQ15262 1439 aa20.17■□□□□ 0.82
TRIM3-207ENST00000528932 MBD5Q9P267 1494 aa20.16■□□□□ 0.82
TRIM3-207ENST00000528932 CEP170BQ9Y4F5 1589 aaPredicted RBP20.16■□□□□ 0.82
TRIM3-207ENST00000528932 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
TRIM3-207ENST00000528932 ZNF335Q9H4Z2 1342 aaPredicted RBP20.13■□□□□ 0.81
TRIM3-207ENST00000528932 ILDR2Q71H61 639 aa20.1■□□□□ 0.81
TRIM3-207ENST00000528932 CAMSAP2Q08AD1 1489 aa20.1■□□□□ 0.81
TRIM3-207ENST00000528932 NCOA2Q15596 1464 aa20.1■□□□□ 0.81
TRIM3-207ENST00000528932 PLA2R1Q13018 1463 aa20.09■□□□□ 0.81
TRIM3-207ENST00000528932 RTEL1-TNFRSF6BF6WH68 1400 aa20.09■□□□□ 0.81
TRIM3-207ENST00000528932 IQSEC2Q5JU85 1478 aa20.08■□□□□ 0.81
TRIM3-207ENST00000528932 KIF3BO15066 747 aa20.08■□□□□ 0.81
TRIM3-207ENST00000528932 DHX29Q7Z478 1369 aaKnown RBP20.08■□□□□ 0.8
TRIM3-207ENST00000528932 CCDC141Q6ZP82 1450 aa20.07■□□□□ 0.8
TRIM3-207ENST00000528932 PKD2Q13563 968 aa20.07■□□□□ 0.8
TRIM3-207ENST00000528932 SPATA31D1Q6ZQQ2 1576 aa20.07■□□□□ 0.8
TRIM3-207ENST00000528932 TCOF1Q13428 1488 aaKnown RBP20.06■□□□□ 0.8
TRIM3-207ENST00000528932 DNMT1P26358 1616 aaKnown RBP20.06■□□□□ 0.8
TRIM3-207ENST00000528932 FBXO31Q5XUX0 539 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms