RNA–Protein interactions for RNA: ENST00000528828.1

NSD3-209, Transcript of nuclear receptor binding SET domain protein 3, humanhuman

TSL 1 (best)

Gene NSD3, Length 1,376 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSD3-209ENST00000528828 RAPGEF6Q8TEU7 1601 aa13.35□□□□□ -0.27
NSD3-209ENST00000528828 NUP153P49790 1475 aaKnown RBP13.35□□□□□ -0.27
NSD3-209ENST00000528828 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
NSD3-209ENST00000528828 ARAP3Q8WWN8 1544 aa13.34□□□□□ -0.27
NSD3-209ENST00000528828 KIF21BO75037 1637 aa13.34□□□□□ -0.27
NSD3-209ENST00000528828 ABCA9Q8IUA7 1624 aa13.34□□□□□ -0.27
NSD3-209ENST00000528828 RAPGEF3O95398 923 aa13.33□□□□□ -0.27
NSD3-209ENST00000528828 HECW2Q9P2P5 1572 aa13.33□□□□□ -0.28
NSD3-209ENST00000528828 EEA1Q15075 1411 aa13.32□□□□□ -0.28
NSD3-209ENST00000528828 ILDR1Q86SU0 546 aaPredicted RBP13.31□□□□□ -0.28
NSD3-209ENST00000528828 ATXN8OSP0DMR3 200 aa13.29□□□□□ -0.28
NSD3-209ENST00000528828 FRMPD1Q5SYB0 1578 aa13.27□□□□□ -0.28
NSD3-209ENST00000528828 NEO1Q92859 1461 aa13.27□□□□□ -0.29
NSD3-209ENST00000528828 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
NSD3-209ENST00000528828 PHLDB1Q86UU1 1377 aa13.26□□□□□ -0.29
NSD3-209ENST00000528828 PLEKHD1A6NEE1 506 aa13.24□□□□□ -0.29
NSD3-209ENST00000528828 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
NSD3-209ENST00000528828 CDK13Q14004 1512 aaKnown RBP13.23□□□□□ -0.29
NSD3-209ENST00000528828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.23□□□□□ -0.29
NSD3-209ENST00000528828 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
NSD3-209ENST00000528828 EFCAB5A4FU69 1503 aa13.22□□□□□ -0.29
NSD3-209ENST00000528828 ADAMTSL3P82987 1691 aa13.21□□□□□ -0.29
NSD3-209ENST00000528828 TTC37Q6PGP7 1564 aa13.21□□□□□ -0.29
NSD3-209ENST00000528828 PTPRMP28827 1452 aa13.21□□□□□ -0.29
NSD3-209ENST00000528828 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
NSD3-209ENST00000528828 FANCAO15360 1455 aa13.2□□□□□ -0.3
NSD3-209ENST00000528828 ARID4BQ4LE39 1312 aaPredicted RBP13.2□□□□□ -0.3
NSD3-209ENST00000528828 DENND4BO75064 1496 aaPredicted RBP13.19□□□□□ -0.3
NSD3-209ENST00000528828 UBTFP17480 764 aaKnown RBP13.19□□□□□ -0.3
NSD3-209ENST00000528828 ATP1B4Q9UN42 357 aaPredicted RBP13.18□□□□□ -0.3
NSD3-209ENST00000528828 BCORL1Q5H9F3 1711 aa13.17□□□□□ -0.3
NSD3-209ENST00000528828 RICTORQ6R327 1708 aa13.17□□□□□ -0.3
NSD3-209ENST00000528828 ARHGAP35Q9NRY4 1499 aa13.17□□□□□ -0.3
NSD3-209ENST00000528828 MADDQ8WXG6 1647 aa13.17□□□□□ -0.3
NSD3-209ENST00000528828 ARHGEF40Q8TER5 1519 aa13.16□□□□□ -0.3
NSD3-209ENST00000528828 YEATS2Q9ULM3 1422 aa13.16□□□□□ -0.3
NSD3-209ENST00000528828 SIGLEC1Q9BZZ2 1709 aa13.15□□□□□ -0.3
NSD3-209ENST00000528828 PLCH2O75038 1416 aa13.13□□□□□ -0.31
NSD3-209ENST00000528828 CFAP74Q9C0B2 1584 aa13.12□□□□□ -0.31
NSD3-209ENST00000528828 ZMYM4Q5VZL5 1548 aa13.12□□□□□ -0.31
NSD3-209ENST00000528828 SCAPERQ9BY12 1400 aa13.12□□□□□ -0.31
NSD3-209ENST00000528828 HECW1Q76N89 1606 aa13.11□□□□□ -0.31
NSD3-209ENST00000528828 ZFYVE16Q7Z3T8 1539 aa13.11□□□□□ -0.31
NSD3-209ENST00000528828 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
NSD3-209ENST00000528828 RIMS1Q86UR5 1692 aaKnown RBP13.11□□□□□ -0.31
NSD3-209ENST00000528828 LMTK3Q96Q04 1460 aa13.11□□□□□ -0.31
NSD3-209ENST00000528828 KIF14Q15058 1648 aa13.1□□□□□ -0.31
NSD3-209ENST00000528828 MLECQ14165 292 aa13.1□□□□□ -0.31
NSD3-209ENST00000528828 POGZQ7Z3K3 1410 aa13.1□□□□□ -0.31
NSD3-209ENST00000528828 PCF11O94913 1555 aaKnown RBP13.08□□□□□ -0.31
NSD3-209ENST00000528828 HSPA2P54652 639 aa13.07□□□□□ -0.32
NSD3-209ENST00000528828 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
NSD3-209ENST00000528828 LRRIQ1Q96JM4 1722 aa13.07□□□□□ -0.32
NSD3-209ENST00000528828 EFCAB2Q5VUJ9 269 aa13.07□□□□□ -0.32
NSD3-209ENST00000528828 MAGI2Q86UL8 1455 aa13.07□□□□□ -0.32
NSD3-209ENST00000528828 TROQ12816 1431 aaPredicted RBP13.06□□□□□ -0.32
NSD3-209ENST00000528828 AFAP1Q8N556 730 aa13.05□□□□□ -0.32
NSD3-209ENST00000528828 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
NSD3-209ENST00000528828 MYO5CQ9NQX4 1742 aa13.04□□□□□ -0.32
NSD3-209ENST00000528828 ATP10AO60312 1499 aa13.03□□□□□ -0.32
NSD3-209ENST00000528828 ARHGAP5Q13017 1502 aa13.02□□□□□ -0.32
NSD3-209ENST00000528828 CEBPAP49715 358 aaPredicted RBP13.02□□□□□ -0.33
NSD3-209ENST00000528828 C9orf84Q5VXU9 1444 aa13.02□□□□□ -0.33
NSD3-209ENST00000528828 FBXO41Q8TF61 875 aa13.01□□□□□ -0.33
NSD3-209ENST00000528828 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
NSD3-209ENST00000528828 CLIP1P30622 1438 aa13□□□□□ -0.33
NSD3-209ENST00000528828 FER1L4A9Z1Z3 1794 aa13□□□□□ -0.33
NSD3-209ENST00000528828 ZNF518AQ6AHZ1 1483 aa12.99□□□□□ -0.33
NSD3-209ENST00000528828 CASKIN1Q8WXD9 1431 aa12.99□□□□□ -0.33
NSD3-209ENST00000528828 CDC42BPBQ9Y5S2 1711 aa12.99□□□□□ -0.33
NSD3-209ENST00000528828 KDM5CP41229 1560 aa12.99□□□□□ -0.33
NSD3-209ENST00000528828 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
NSD3-209ENST00000528828 MYT1LQ9UL68 1186 aa12.97□□□□□ -0.33
NSD3-209ENST00000528828 DIP2CQ9Y2E4 1556 aa12.96□□□□□ -0.33
NSD3-209ENST00000528828 PREX2Q70Z35 1606 aa12.95□□□□□ -0.34
NSD3-209ENST00000528828 ABCA6Q8N139 1617 aa12.95□□□□□ -0.34
NSD3-209ENST00000528828 CCDC18Q5T9S5 1454 aa12.94□□□□□ -0.34
NSD3-209ENST00000528828 ABCC1P33527 1531 aa12.94□□□□□ -0.34
NSD3-209ENST00000528828 MLH3Q9UHC1 1453 aa12.93□□□□□ -0.34
NSD3-209ENST00000528828 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
NSD3-209ENST00000528828 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
NSD3-209ENST00000528828 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
NSD3-209ENST00000528828 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
NSD3-209ENST00000528828 FYCO1Q9BQS8 1478 aa12.92□□□□□ -0.34
NSD3-209ENST00000528828 PIP4P2Q8N4L2 257 aa12.92□□□□□ -0.34
NSD3-209ENST00000528828 ZNF777Q9ULD5 760 aaPredicted RBP12.92□□□□□ -0.34
NSD3-209ENST00000528828 ITSN2Q9NZM3 1697 aa12.92□□□□□ -0.34
NSD3-209ENST00000528828 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
NSD3-209ENST00000528828 REREQ9P2R6 1566 aa12.9□□□□□ -0.34
NSD3-209ENST00000528828 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
NSD3-209ENST00000528828 GPATCH8Q9UKJ3 1502 aaKnown RBP12.89□□□□□ -0.35
NSD3-209ENST00000528828 HNRNPMP52272 730 aaKnown RBP eCLIP12.89□□□□□ -0.35
NSD3-209ENST00000528828 SAMD9LQ8IVG5 1584 aa12.89□□□□□ -0.35
NSD3-209ENST00000528828 PREX1Q8TCU6 1659 aa12.89□□□□□ -0.35
NSD3-209ENST00000528828 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
NSD3-209ENST00000528828 CERKQ8TCT0 537 aa12.88□□□□□ -0.35
NSD3-209ENST00000528828 AGLP35573 1532 aa12.88□□□□□ -0.35
NSD3-209ENST00000528828 FXR2P51116 673 aaKnown RBP eCLIP12.87□□□□□ -0.351e-9■■■■□ 21.3
NSD3-209ENST00000528828 SYCP2Q9BX26 1530 aa12.87□□□□□ -0.35
NSD3-209ENST00000528828 STRCQ7RTU9 1775 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms