RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 ADGRL1O94910 1474 aa27.48■■□□□ 1.99
CHRDL2-206ENST00000528789 MAP3K1Q13233 1512 aa27.47■■□□□ 1.99
CHRDL2-206ENST00000528789 LRRC9Q6ZRR7 1453 aa27.47■■□□□ 1.99
CHRDL2-206ENST00000528789 APLP2Q06481 763 aa27.47■■□□□ 1.99
CHRDL2-206ENST00000528789 KANK4Q5T7N3 995 aaPredicted RBP27.47■■□□□ 1.99
CHRDL2-206ENST00000528789 CCNB3Q8WWL7 1395 aa27.47■■□□□ 1.99
CHRDL2-206ENST00000528789 GPATCH8Q9UKJ3 1502 aaKnown RBP27.46■■□□□ 1.99
CHRDL2-206ENST00000528789 DENND4BO75064 1496 aaPredicted RBP27.46■■□□□ 1.99
CHRDL2-206ENST00000528789 FRMPD1Q5SYB0 1578 aa27.44■■□□□ 1.98
CHRDL2-206ENST00000528789 SCAPERQ9BY12 1400 aa27.44■■□□□ 1.98
CHRDL2-206ENST00000528789 SUPT6HQ7KZ85 1726 aaKnown RBP27.43■■□□□ 1.98
CHRDL2-206ENST00000528789 NCOA2Q15596 1464 aa27.43■■□□□ 1.98
CHRDL2-206ENST00000528789 ZNF777Q9ULD5 760 aaPredicted RBP27.41■■□□□ 1.98
CHRDL2-206ENST00000528789 RICTORQ6R327 1708 aa27.39■■□□□ 1.98
CHRDL2-206ENST00000528789 CFDP1Q9UEE9 299 aaPredicted RBP27.39■■□□□ 1.98
CHRDL2-206ENST00000528789 POGZQ7Z3K3 1410 aa27.37■■□□□ 1.97
CHRDL2-206ENST00000528789 ABCC1P33527 1531 aa27.34■■□□□ 1.97
CHRDL2-206ENST00000528789 SAMD9LQ8IVG5 1584 aa27.34■■□□□ 1.97
CHRDL2-206ENST00000528789 ITSN2Q9NZM3 1697 aa27.33■■□□□ 1.97
CHRDL2-206ENST00000528789 ARHGEF12Q9NZN5 1544 aa27.32■■□□□ 1.96
CHRDL2-206ENST00000528789 AFAP1Q8N556 730 aa27.3■■□□□ 1.96
CHRDL2-206ENST00000528789 ZMYM4Q5VZL5 1548 aa27.29■■□□□ 1.96
CHRDL2-206ENST00000528789 TRAPPC8Q9Y2L5 1435 aa27.28■■□□□ 1.96
CHRDL2-206ENST00000528789 ZNF644Q9H582 1327 aaPredicted RBP27.28■■□□□ 1.96
CHRDL2-206ENST00000528789 SYCP2Q9BX26 1530 aa27.27■■□□□ 1.96
CHRDL2-206ENST00000528789 ZNF518AQ6AHZ1 1483 aa27.27■■□□□ 1.96
CHRDL2-206ENST00000528789 HNRNPMP52272 730 aaKnown RBP eCLIP27.26■■□□□ 1.95
CHRDL2-206ENST00000528789 YEATS2Q9ULM3 1422 aa27.24■■□□□ 1.95
CHRDL2-206ENST00000528789 ZFYVE16Q7Z3T8 1539 aa27.23■■□□□ 1.95
CHRDL2-206ENST00000528789 ARHGEF40Q8TER5 1519 aa27.23■■□□□ 1.95
CHRDL2-206ENST00000528789 PLEKHH2Q8IVE3 1493 aa27.23■■□□□ 1.95
CHRDL2-206ENST00000528789 MYT1LQ9UL68 1186 aa27.22■■□□□ 1.95
CHRDL2-206ENST00000528789 KDM5CP41229 1560 aa27.22■■□□□ 1.95
CHRDL2-206ENST00000528789 KIAA1107Q9UPP5 1409 aa27.21■■□□□ 1.95
CHRDL2-206ENST00000528789 MAGI2Q86UL8 1455 aa27.2■■□□□ 1.95
CHRDL2-206ENST00000528789 MYOM3Q5VTT5 1437 aa27.19■■□□□ 1.94
CHRDL2-206ENST00000528789 CAMSAP2Q08AD1 1489 aa27.19■■□□□ 1.94
CHRDL2-206ENST00000528789 HECW2Q9P2P5 1572 aa27.16■■□□□ 1.94
CHRDL2-206ENST00000528789 KDM4FA0A1W2PPD8 638 aa27.15■■□□□ 1.94
CHRDL2-206ENST00000528789 PPARGC1BQ86YN6 1023 aaKnown RBP27.15■■□□□ 1.94
CHRDL2-206ENST00000528789 MBD5Q9P267 1494 aa27.13■■□□□ 1.93
CHRDL2-206ENST00000528789 MLH3Q9UHC1 1453 aa27.13■■□□□ 1.93
CHRDL2-206ENST00000528789 ARID4BQ4LE39 1312 aaPredicted RBP27.13■■□□□ 1.93
CHRDL2-206ENST00000528789 SPAG9O60271 1321 aaKnown RBP27.12■■□□□ 1.93
CHRDL2-206ENST00000528789 MIA2Q96PC5 1412 aa27.11■■□□□ 1.93
CHRDL2-206ENST00000528789 ATP10AO60312 1499 aa27.1■■□□□ 1.93
CHRDL2-206ENST00000528789 DIP2CQ9Y2E4 1556 aa27.09■■□□□ 1.93
CHRDL2-206ENST00000528789 ABCA6Q8N139 1617 aa27.08■■□□□ 1.93
CHRDL2-206ENST00000528789 KIDINS220Q9ULH0 1771 aa27.08■■□□□ 1.93
CHRDL2-206ENST00000528789 SIGLEC1Q9BZZ2 1709 aa27.07■■□□□ 1.92
CHRDL2-206ENST00000528789 C9orf84Q5VXU9 1444 aa27.07■■□□□ 1.92
CHRDL2-206ENST00000528789 CCDC141Q6ZP82 1450 aa27.06■■□□□ 1.92
CHRDL2-206ENST00000528789 FGD6Q6ZV73 1430 aa27.05■■□□□ 1.92
CHRDL2-206ENST00000528789 AEBP2Q6ZN18 517 aaPredicted RBP27.04■■□□□ 1.92
CHRDL2-206ENST00000528789 ATP7AQ04656 1500 aa27.04■■□□□ 1.92
CHRDL2-206ENST00000528789 PTPN23Q9H3S7 1636 aa27.04■■□□□ 1.92
CHRDL2-206ENST00000528789 INO80Q9ULG1 1556 aaPredicted RBP27.03■■□□□ 1.92
CHRDL2-206ENST00000528789 ARHGEF5Q12774 1597 aa27.02■■□□□ 1.92
CHRDL2-206ENST00000528789 MLECQ14165 292 aa27■■□□□ 1.91
CHRDL2-206ENST00000528789 RSPH4AQ5TD94 716 aa27■■□□□ 1.91
CHRDL2-206ENST00000528789 BCORL1Q5H9F3 1711 aa26.99■■□□□ 1.91
CHRDL2-206ENST00000528789 TCOF1Q13428 1488 aaKnown RBP26.97■■□□□ 1.91
CHRDL2-206ENST00000528789 TSPY4P0CV99 314 aa26.95■■□□□ 1.9
CHRDL2-206ENST00000528789 TSPY10P0CW01 314 aa26.95■■□□□ 1.9
CHRDL2-206ENST00000528789 REREQ9P2R6 1566 aa26.95■■□□□ 1.9
CHRDL2-206ENST00000528789 RTEL1-TNFRSF6BF6WH68 1400 aa26.94■■□□□ 1.9
CHRDL2-206ENST00000528789 ADAMTSL3P82987 1691 aa26.94■■□□□ 1.9
CHRDL2-206ENST00000528789 FAM50AQ14320 339 aaKnown RBP26.93■■□□□ 1.9
CHRDL2-206ENST00000528789 A2MP01023 1474 aa26.91■■□□□ 1.9
CHRDL2-206ENST00000528789 MADDQ8WXG6 1647 aa26.9■■□□□ 1.9
CHRDL2-206ENST00000528789 ABCC5O15440 1437 aa26.9■■□□□ 1.9
CHRDL2-206ENST00000528789 AGLP35573 1532 aa26.88■■□□□ 1.89
CHRDL2-206ENST00000528789 ADGBQ8N7X0 1667 aa26.87■■□□□ 1.89
CHRDL2-206ENST00000528789 DAPK1P53355 1430 aa26.87■■□□□ 1.89
CHRDL2-206ENST00000528789 MAST1Q9Y2H9 1570 aa26.87■■□□□ 1.89
CHRDL2-206ENST00000528789 DNMT1P26358 1616 aaKnown RBP26.86■■□□□ 1.89
CHRDL2-206ENST00000528789 PLXNC1O60486 1568 aa26.85■■□□□ 1.89
CHRDL2-206ENST00000528789 CROCC2H7BZ55 1655 aa26.85■■□□□ 1.89
CHRDL2-206ENST00000528789 RIMS1Q86UR5 1692 aaKnown RBP26.83■■□□□ 1.89
CHRDL2-206ENST00000528789 DHX29Q7Z478 1369 aaKnown RBP26.82■■□□□ 1.88
CHRDL2-206ENST00000528789 SHANK2Q9UPX8 1470 aa26.81■■□□□ 1.88
CHRDL2-206ENST00000528789 FER1L4A9Z1Z3 1794 aa26.81■■□□□ 1.88
CHRDL2-206ENST00000528789 PTPRMP28827 1452 aa26.81■■□□□ 1.88
CHRDL2-206ENST00000528789 CHIC2Q9UKJ5 165 aa26.8■■□□□ 1.88
CHRDL2-206ENST00000528789 PLPPR3Q6T4P5 718 aa26.79■■□□□ 1.88
CHRDL2-206ENST00000528789 GGT6Q6P531 493 aa26.75■■□□□ 1.87
CHRDL2-206ENST00000528789 RRP7BPQ9NSQ0 103 aa26.75■■□□□ 1.87
CHRDL2-206ENST00000528789 KIF3BO15066 747 aa26.73■■□□□ 1.87
CHRDL2-206ENST00000528789 KIF15Q9NS87 1388 aa26.72■■□□□ 1.87
CHRDL2-206ENST00000528789 ITGAEP38570 1179 aa26.72■■□□□ 1.87
CHRDL2-206ENST00000528789 ESF1Q9H501 851 aaKnown RBP26.71■■□□□ 1.87
CHRDL2-206ENST00000528789 ANKRD30AQ9BXX3 1397 aa26.71■■□□□ 1.87
CHRDL2-206ENST00000528789 PTPRKQ15262 1439 aa26.7■■□□□ 1.86
CHRDL2-206ENST00000528789 RRBP1Q9P2E9 1410 aaKnown RBP26.7■■□□□ 1.86
CHRDL2-206ENST00000528789 DUOX2Q9NRD8 1548 aa26.7■■□□□ 1.86
CHRDL2-206ENST00000528789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.68■■□□□ 1.86
CHRDL2-206ENST00000528789 CEBPAP49715 358 aaPredicted RBP26.67■■□□□ 1.86
CHRDL2-206ENST00000528789 NCOA1Q15788 1441 aa26.66■■□□□ 1.86
CHRDL2-206ENST00000528789 ADGRL2O95490 1459 aa26.66■■□□□ 1.86
CHRDL2-206ENST00000528789 CNTLNQ9NXG0 1405 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms