RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 ZNF777Q9ULD5 760 aaPredicted RBP22.7■■□□□ 1.22
CAPN1-216ENST00000528739 MYO5CQ9NQX4 1742 aa22.68■■□□□ 1.22
CAPN1-216ENST00000528739 FRMPD1Q5SYB0 1578 aa22.64■■□□□ 1.22
CAPN1-216ENST00000528739 AFAP1Q8N556 730 aa22.62■■□□□ 1.21
CAPN1-216ENST00000528739 POGZQ7Z3K3 1410 aa22.61■■□□□ 1.21
CAPN1-216ENST00000528739 CCNB3Q8WWL7 1395 aa22.61■■□□□ 1.21
CAPN1-216ENST00000528739 CFDP1Q9UEE9 299 aaPredicted RBP22.6■■□□□ 1.21
CAPN1-216ENST00000528739 RICTORQ6R327 1708 aa22.6■■□□□ 1.21
CAPN1-216ENST00000528739 MLECQ14165 292 aa22.57■■□□□ 1.2
CAPN1-216ENST00000528739 ZFYVE16Q7Z3T8 1539 aa22.57■■□□□ 1.2
CAPN1-216ENST00000528739 VPS8Q8N3P4 1428 aa22.57■■□□□ 1.2
CAPN1-216ENST00000528739 YEATS2Q9ULM3 1422 aa22.57■■□□□ 1.2
CAPN1-216ENST00000528739 MAGI2Q86UL8 1455 aa22.55■■□□□ 1.2
CAPN1-216ENST00000528739 ZNF518AQ6AHZ1 1483 aa22.54■■□□□ 1.2
CAPN1-216ENST00000528739 APLP2Q06481 763 aa22.54■■□□□ 1.2
CAPN1-216ENST00000528739 CDC42BPBQ9Y5S2 1711 aa22.54■■□□□ 1.2
CAPN1-216ENST00000528739 PREX2Q70Z35 1606 aa22.53■■□□□ 1.2
CAPN1-216ENST00000528739 ARHGEF40Q8TER5 1519 aa22.53■■□□□ 1.2
CAPN1-216ENST00000528739 GPATCH8Q9UKJ3 1502 aaKnown RBP22.53■■□□□ 1.2
CAPN1-216ENST00000528739 HNRNPMP52272 730 aaKnown RBP eCLIP22.53■■□□□ 1.2
CAPN1-216ENST00000528739 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
CAPN1-216ENST00000528739 ZMYM4Q5VZL5 1548 aa22.52■■□□□ 1.2
CAPN1-216ENST00000528739 EHBP1L1Q8N3D4 1523 aa22.51■■□□□ 1.19
CAPN1-216ENST00000528739 TRAPPC8Q9Y2L5 1435 aa22.49■■□□□ 1.19
CAPN1-216ENST00000528739 CDC42BPAQ5VT25 1732 aa22.48■■□□□ 1.19
CAPN1-216ENST00000528739 ATP10AO60312 1499 aa22.47■■□□□ 1.19
CAPN1-216ENST00000528739 ABCC1P33527 1531 aa22.46■■□□□ 1.19
CAPN1-216ENST00000528739 ARHGEF12Q9NZN5 1544 aa22.46■■□□□ 1.19
CAPN1-216ENST00000528739 SPAG9O60271 1321 aaKnown RBP22.44■■□□□ 1.18
CAPN1-216ENST00000528739 C9orf84Q5VXU9 1444 aa22.44■■□□□ 1.18
CAPN1-216ENST00000528739 TIAM1Q13009 1591 aa22.43■■□□□ 1.18
CAPN1-216ENST00000528739 ZNF644Q9H582 1327 aaPredicted RBP22.43■■□□□ 1.18
CAPN1-216ENST00000528739 KANK4Q5T7N3 995 aaPredicted RBP22.42■■□□□ 1.18
CAPN1-216ENST00000528739 SAMD9LQ8IVG5 1584 aa22.42■■□□□ 1.18
CAPN1-216ENST00000528739 NCOA2Q15596 1464 aa22.41■■□□□ 1.18
CAPN1-216ENST00000528739 PLEKHH2Q8IVE3 1493 aa22.41■■□□□ 1.18
CAPN1-216ENST00000528739 BCORL1Q5H9F3 1711 aa22.41■■□□□ 1.18
CAPN1-216ENST00000528739 KDM5CP41229 1560 aa22.41■■□□□ 1.18
CAPN1-216ENST00000528739 SYCP2Q9BX26 1530 aa22.41■■□□□ 1.18
CAPN1-216ENST00000528739 ITSN2Q9NZM3 1697 aa22.4■■□□□ 1.18
CAPN1-216ENST00000528739 HECW2Q9P2P5 1572 aa22.4■■□□□ 1.18
CAPN1-216ENST00000528739 PTPRMP28827 1452 aa22.4■■□□□ 1.18
CAPN1-216ENST00000528739 MLH3Q9UHC1 1453 aa22.4■■□□□ 1.18
CAPN1-216ENST00000528739 SUPT6HQ7KZ85 1726 aaKnown RBP22.39■■□□□ 1.17
CAPN1-216ENST00000528739 LRRC9Q6ZRR7 1453 aa22.39■■□□□ 1.17
CAPN1-216ENST00000528739 ADAMTSL3P82987 1691 aa22.39■■□□□ 1.17
CAPN1-216ENST00000528739 KIAA1107Q9UPP5 1409 aa22.38■■□□□ 1.17
CAPN1-216ENST00000528739 ESF1Q9H501 851 aaKnown RBP22.37■■□□□ 1.17
CAPN1-216ENST00000528739 MADDQ8WXG6 1647 aa22.37■■□□□ 1.17
CAPN1-216ENST00000528739 DIP2CQ9Y2E4 1556 aa22.33■■□□□ 1.16
CAPN1-216ENST00000528739 RIMS1Q86UR5 1692 aaKnown RBP22.32■■□□□ 1.16
CAPN1-216ENST00000528739 SIGLEC1Q9BZZ2 1709 aa22.31■■□□□ 1.16
CAPN1-216ENST00000528739 MAP3K1Q13233 1512 aa22.31■■□□□ 1.16
CAPN1-216ENST00000528739 ABCA6Q8N139 1617 aa22.3■■□□□ 1.16
CAPN1-216ENST00000528739 TSPY4P0CV99 314 aa22.28■■□□□ 1.16
CAPN1-216ENST00000528739 TSPY10P0CW01 314 aa22.28■■□□□ 1.16
CAPN1-216ENST00000528739 RSPH4AQ5TD94 716 aa22.28■■□□□ 1.16
CAPN1-216ENST00000528739 CEBPAP49715 358 aaPredicted RBP22.27■■□□□ 1.16
CAPN1-216ENST00000528739 KIDINS220Q9ULH0 1771 aa22.27■■□□□ 1.16
CAPN1-216ENST00000528739 CAMSAP2Q08AD1 1489 aa22.27■■□□□ 1.16
CAPN1-216ENST00000528739 ATP7AQ04656 1500 aa22.26■■□□□ 1.15
CAPN1-216ENST00000528739 MBD5Q9P267 1494 aa22.24■■□□□ 1.15
CAPN1-216ENST00000528739 GGT6Q6P531 493 aa22.24■■□□□ 1.15
CAPN1-216ENST00000528739 FER1L4A9Z1Z3 1794 aa22.22■■□□□ 1.15
CAPN1-216ENST00000528739 REREQ9P2R6 1566 aa22.22■■□□□ 1.15
CAPN1-216ENST00000528739 A2MP01023 1474 aa22.22■■□□□ 1.15
CAPN1-216ENST00000528739 CCDC141Q6ZP82 1450 aa22.22■■□□□ 1.15
CAPN1-216ENST00000528739 MYOM3Q5VTT5 1437 aa22.21■■□□□ 1.15
CAPN1-216ENST00000528739 AGLP35573 1532 aa22.2■■□□□ 1.14
CAPN1-216ENST00000528739 RTEL1-TNFRSF6BF6WH68 1400 aa22.18■■□□□ 1.14
CAPN1-216ENST00000528739 INO80Q9ULG1 1556 aaPredicted RBP22.17■■□□□ 1.14
CAPN1-216ENST00000528739 MIA2Q96PC5 1412 aa22.16■■□□□ 1.14
CAPN1-216ENST00000528739 KIF3BO15066 747 aa22.15■■□□□ 1.14
CAPN1-216ENST00000528739 HSPA2P54652 639 aa22.15■■□□□ 1.14
CAPN1-216ENST00000528739 DHX29Q7Z478 1369 aaKnown RBP22.13■■□□□ 1.13
CAPN1-216ENST00000528739 CNTLNQ9NXG0 1405 aa22.11■■□□□ 1.13
CAPN1-216ENST00000528739 ARHGEF5Q12774 1597 aa22.1■■□□□ 1.13
CAPN1-216ENST00000528739 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
CAPN1-216ENST00000528739 FAM50AQ14320 339 aaKnown RBP22.09■■□□□ 1.13
CAPN1-216ENST00000528739 ADGBQ8N7X0 1667 aa22.09■■□□□ 1.13
CAPN1-216ENST00000528739 LMTK3Q96Q04 1460 aa22.09■■□□□ 1.13
CAPN1-216ENST00000528739 ZMYM3Q14202 1370 aa22.07■■□□□ 1.12
CAPN1-216ENST00000528739 PPP6R1Q9UPN7 881 aa22.06■■□□□ 1.12
CAPN1-216ENST00000528739 PLXNC1O60486 1568 aa22.06■■□□□ 1.12
CAPN1-216ENST00000528739 FGD6Q6ZV73 1430 aa22.06■■□□□ 1.12
CAPN1-216ENST00000528739 CHIC2Q9UKJ5 165 aa22.05■■□□□ 1.12
CAPN1-216ENST00000528739 RRP7BPQ9NSQ0 103 aa22.04■■□□□ 1.12
CAPN1-216ENST00000528739 PTPN23Q9H3S7 1636 aa22.04■■□□□ 1.12
CAPN1-216ENST00000528739 UHRF1BP1Q6BDS2 1440 aa22.04■■□□□ 1.12
CAPN1-216ENST00000528739 WASHC2CQ9Y4E1 1318 aa22.03■■□□□ 1.12
CAPN1-216ENST00000528739 C3P01024 1663 aa22.01■■□□□ 1.11
CAPN1-216ENST00000528739 ABCC5O15440 1437 aa21.99■■□□□ 1.11
CAPN1-216ENST00000528739 CLTCQ00610 1675 aaKnown RBP21.98■■□□□ 1.11
CAPN1-216ENST00000528739 DAPK1P53355 1430 aa21.97■■□□□ 1.11
CAPN1-216ENST00000528739 MAST1Q9Y2H9 1570 aa21.96■■□□□ 1.11
CAPN1-216ENST00000528739 KIF15Q9NS87 1388 aa21.96■■□□□ 1.11
CAPN1-216ENST00000528739 TCOF1Q13428 1488 aaKnown RBP21.96■■□□□ 1.11
CAPN1-216ENST00000528739 PREX1Q8TCU6 1659 aa21.95■■□□□ 1.1
CAPN1-216ENST00000528739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.94■■□□□ 1.1
CAPN1-216ENST00000528739 ANKRD30AQ9BXX3 1397 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms