RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 ATP1B4Q9UN42 357 aaPredicted RBP30.03■■■□□ 2.4
YIF1A-212ENST00000528575 TROQ12816 1431 aaPredicted RBP30.03■■■□□ 2.4
YIF1A-212ENST00000528575 POGZQ7Z3K3 1410 aa30.02■■■□□ 2.4
YIF1A-212ENST00000528575 MYO5CQ9NQX4 1742 aa30.02■■■□□ 2.4
YIF1A-212ENST00000528575 FYCO1Q9BQS8 1478 aa30.01■■■□□ 2.4
YIF1A-212ENST00000528575 SCAPERQ9BY12 1400 aa30.01■■■□□ 2.39
YIF1A-212ENST00000528575 CCDC18Q5T9S5 1454 aa30■■■□□ 2.39
YIF1A-212ENST00000528575 ZFYVE16Q7Z3T8 1539 aa29.99■■■□□ 2.39
YIF1A-212ENST00000528575 MAGI2Q86UL8 1455 aa29.93■■■□□ 2.38
YIF1A-212ENST00000528575 RIMS1Q86UR5 1692 aaKnown RBP29.92■■■□□ 2.38
YIF1A-212ENST00000528575 LOC105371045A0A1W2PR82 267 aa29.92■■■□□ 2.38
YIF1A-212ENST00000528575 CDC42BPBQ9Y5S2 1711 aa29.92■■■□□ 2.38
YIF1A-212ENST00000528575 ARID4BQ4LE39 1312 aaPredicted RBP29.92■■■□□ 2.38
YIF1A-212ENST00000528575 KDM5CP41229 1560 aa29.87■■■□□ 2.37
YIF1A-212ENST00000528575 EFCAB2Q5VUJ9 269 aa29.87■■■□□ 2.37
YIF1A-212ENST00000528575 ILDR1Q86SU0 546 aaPredicted RBP29.87■■■□□ 2.37
YIF1A-212ENST00000528575 ARHGAP5Q13017 1502 aa29.86■■■□□ 2.37
YIF1A-212ENST00000528575 ARHGEF12Q9NZN5 1544 aa29.86■■■□□ 2.37
YIF1A-212ENST00000528575 LMTK3Q96Q04 1460 aa29.85■■■□□ 2.37
YIF1A-212ENST00000528575 PREX2Q70Z35 1606 aa29.83■■■□□ 2.37
YIF1A-212ENST00000528575 AFAP1Q8N556 730 aa29.82■■■□□ 2.36
YIF1A-212ENST00000528575 ATP10AO60312 1499 aa29.81■■■□□ 2.36
YIF1A-212ENST00000528575 ZNF518AQ6AHZ1 1483 aa29.79■■■□□ 2.36
YIF1A-212ENST00000528575 CDC42BPAQ5VT25 1732 aa29.79■■■□□ 2.36
YIF1A-212ENST00000528575 ABCC1P33527 1531 aa29.78■■■□□ 2.36
YIF1A-212ENST00000528575 C9orf84Q5VXU9 1444 aa29.77■■■□□ 2.36
YIF1A-212ENST00000528575 TRAPPC8Q9Y2L5 1435 aa29.77■■■□□ 2.36
YIF1A-212ENST00000528575 DIP2CQ9Y2E4 1556 aa29.76■■■□□ 2.35
YIF1A-212ENST00000528575 FER1L4A9Z1Z3 1794 aa29.75■■■□□ 2.35
YIF1A-212ENST00000528575 ABCA6Q8N139 1617 aa29.74■■■□□ 2.35
YIF1A-212ENST00000528575 VPS8Q8N3P4 1428 aa29.73■■■□□ 2.35
YIF1A-212ENST00000528575 MLECQ14165 292 aa29.73■■■□□ 2.35
YIF1A-212ENST00000528575 ITSN2Q9NZM3 1697 aa29.72■■■□□ 2.35
YIF1A-212ENST00000528575 MLH3Q9UHC1 1453 aa29.69■■■□□ 2.34
YIF1A-212ENST00000528575 GPATCH8Q9UKJ3 1502 aaKnown RBP29.67■■■□□ 2.34
YIF1A-212ENST00000528575 SAMD9LQ8IVG5 1584 aa29.67■■■□□ 2.34
YIF1A-212ENST00000528575 REREQ9P2R6 1566 aa29.67■■■□□ 2.34
YIF1A-212ENST00000528575 KIDINS220Q9ULH0 1771 aa29.65■■■□□ 2.34
YIF1A-212ENST00000528575 HSPA2P54652 639 aa29.63■■■□□ 2.33
YIF1A-212ENST00000528575 PLPPR3Q6T4P5 718 aa29.63■■■□□ 2.33
YIF1A-212ENST00000528575 MTUS2Q5JR59 1369 aa29.62■■■□□ 2.33
YIF1A-212ENST00000528575 EHBP1L1Q8N3D4 1523 aa29.59■■■□□ 2.33
YIF1A-212ENST00000528575 CEBPAP49715 358 aaPredicted RBP29.58■■■□□ 2.33
YIF1A-212ENST00000528575 MAP3K1Q13233 1512 aa29.58■■■□□ 2.33
YIF1A-212ENST00000528575 SYCP2Q9BX26 1530 aa29.57■■■□□ 2.32
YIF1A-212ENST00000528575 AGLP35573 1532 aa29.56■■■□□ 2.32
YIF1A-212ENST00000528575 TIAM1Q13009 1591 aa29.52■■■□□ 2.32
YIF1A-212ENST00000528575 HNRNPMP52272 730 aaKnown RBP eCLIP29.48■■■□□ 2.31
YIF1A-212ENST00000528575 ZNF777Q9ULD5 760 aaPredicted RBP29.48■■■□□ 2.31
YIF1A-212ENST00000528575 PREX1Q8TCU6 1659 aa29.47■■■□□ 2.31
YIF1A-212ENST00000528575 C3P01024 1663 aa29.47■■■□□ 2.31
YIF1A-212ENST00000528575 KIAA1107Q9UPP5 1409 aa29.46■■■□□ 2.31
YIF1A-212ENST00000528575 INO80Q9ULG1 1556 aaPredicted RBP29.46■■■□□ 2.31
YIF1A-212ENST00000528575 CCNB3Q8WWL7 1395 aa29.45■■■□□ 2.31
YIF1A-212ENST00000528575 MYT1LQ9UL68 1186 aa29.44■■■□□ 2.3
YIF1A-212ENST00000528575 ZNF644Q9H582 1327 aaPredicted RBP29.44■■■□□ 2.3
YIF1A-212ENST00000528575 PLXNC1O60486 1568 aa29.42■■■□□ 2.3
YIF1A-212ENST00000528575 LRRC9Q6ZRR7 1453 aa29.42■■■□□ 2.3
YIF1A-212ENST00000528575 ATP7AQ04656 1500 aa29.4■■■□□ 2.3
YIF1A-212ENST00000528575 SUPT6HQ7KZ85 1726 aaKnown RBP29.4■■■□□ 2.3
YIF1A-212ENST00000528575 CFDP1Q9UEE9 299 aaPredicted RBP29.4■■■□□ 2.3
YIF1A-212ENST00000528575 MBD5Q9P267 1494 aa29.4■■■□□ 2.3
YIF1A-212ENST00000528575 STRCQ7RTU9 1775 aa29.39■■■□□ 2.3
YIF1A-212ENST00000528575 APLP2Q06481 763 aa29.39■■■□□ 2.3
YIF1A-212ENST00000528575 PLEKHH2Q8IVE3 1493 aa29.38■■■□□ 2.29
YIF1A-212ENST00000528575 SPAG9O60271 1321 aaKnown RBP29.37■■■□□ 2.29
YIF1A-212ENST00000528575 FBXO41Q8TF61 875 aa29.35■■■□□ 2.29
YIF1A-212ENST00000528575 NCOA2Q15596 1464 aa29.35■■■□□ 2.29
YIF1A-212ENST00000528575 SETD1BQ9UPS6 1966 aaKnown RBP29.33■■■□□ 2.29
YIF1A-212ENST00000528575 A2MP01023 1474 aa29.29■■■□□ 2.28
YIF1A-212ENST00000528575 UHRF1BP1Q6BDS2 1440 aa29.28■■■□□ 2.28
YIF1A-212ENST00000528575 MROH2AA6NES4 1674 aa29.27■■■□□ 2.28
YIF1A-212ENST00000528575 CNTLNQ9NXG0 1405 aa29.26■■■□□ 2.27
YIF1A-212ENST00000528575 KANK4Q5T7N3 995 aaPredicted RBP29.23■■■□□ 2.27
YIF1A-212ENST00000528575 CLTCQ00610 1675 aaKnown RBP29.23■■■□□ 2.27
YIF1A-212ENST00000528575 ADGBQ8N7X0 1667 aa29.22■■■□□ 2.27
YIF1A-212ENST00000528575 ZMYM3Q14202 1370 aa29.21■■■□□ 2.27
YIF1A-212ENST00000528575 CAMSAP2Q08AD1 1489 aa29.2■■■□□ 2.26
YIF1A-212ENST00000528575 RSPH4AQ5TD94 716 aa29.19■■■□□ 2.26
YIF1A-212ENST00000528575 RTEL1-TNFRSF6BF6WH68 1400 aa29.19■■■□□ 2.26
YIF1A-212ENST00000528575 MIA2Q96PC5 1412 aa29.19■■■□□ 2.26
YIF1A-212ENST00000528575 NPATQ14207 1427 aa29.17■■■□□ 2.26
YIF1A-212ENST00000528575 MYOM3Q5VTT5 1437 aa29.15■■■□□ 2.26
YIF1A-212ENST00000528575 CERKQ8TCT0 537 aa29.15■■■□□ 2.26
YIF1A-212ENST00000528575 PTPRKQ15262 1439 aa29.14■■■□□ 2.26
YIF1A-212ENST00000528575 NCOA1Q15788 1441 aa29.13■■■□□ 2.25
YIF1A-212ENST00000528575 CCDC141Q6ZP82 1450 aa29.13■■■□□ 2.25
YIF1A-212ENST00000528575 ESF1Q9H501 851 aaKnown RBP29.12■■■□□ 2.25
YIF1A-212ENST00000528575 DHX29Q7Z478 1369 aaKnown RBP29.12■■■□□ 2.25
YIF1A-212ENST00000528575 GGT6Q6P531 493 aa29.1■■■□□ 2.25
YIF1A-212ENST00000528575 ARHGEF5Q12774 1597 aa29.09■■■□□ 2.25
YIF1A-212ENST00000528575 MYO3AQ8NEV4 1616 aa29.09■■■□□ 2.25
YIF1A-212ENST00000528575 PTPRTO14522 1441 aa29.09■■■□□ 2.25
YIF1A-212ENST00000528575 ZNF142P52746 1687 aaPredicted RBP29.07■■■□□ 2.24
YIF1A-212ENST00000528575 CAMSAP1Q5T5Y3 1602 aa29.07■■■□□ 2.24
YIF1A-212ENST00000528575 LTBP4Q8N2S1 1624 aa29.05■■■□□ 2.24
YIF1A-212ENST00000528575 CEP170BQ9Y4F5 1589 aaPredicted RBP29.01■■■□□ 2.24
YIF1A-212ENST00000528575 DMRT2Q9Y5R5 561 aa29■■■□□ 2.23
YIF1A-212ENST00000528575 PPP6R1Q9UPN7 881 aa28.99■■■□□ 2.23
YIF1A-212ENST00000528575 MAST1Q9Y2H9 1570 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms